Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316098

Identifier: 74316098

GI number: 74316098

Start: 83013

End: 83366

Strand: Reverse

Name: 74316098

Synonym: Tbd_0080

Alternate gene names: NA

Gene position: 83366-83013 (Counterclockwise)

Preceding gene: 74316099

Following gene: 74316096

Centisome position: 2.86

GC content: 67.23

Gene sequence:

>354_bases
GTGAAGGGCAAGGAGCGGATCGTCTTTCTCGATCGCGCCGCCTTCGTTGCGGACGACCTGCCCATCCCCGACTTCGATCA
CAACTGGAGCGAGTATCCGGCCACCGAGCCGGCCGATCTCGTGCCGCGGCTGTTCTGGGCGACGACGGCGATCACCCACG
CCTGCGCACTCGACGCCGAAGTGCTCGCGCAGTTGCACAAACTCAAACGCATTGTGGTGACCGGCCCCGCGCTGATCGAT
CCCGCCGCAGGCTCGGCCAACGACCGCATCGTCCGCCACCTGCCGCACAGCGAGACGCCCGCCGCGACGCTGATCGCACT
GCTCGAAACGCTGGTGCGCGAAGCCGAAGCGTAG

Upstream 100 bases:

>100_bases
TGATCGCGCAGCAGATGAATGCATTGATGGGGGCCGGTGACAGCGAACTCGATTCCTCGGCCCTCATGCGGGCGCTCGAA
CGGCTGACCGCCGACTCCAG

Downstream 100 bases:

>100_bases
GGCGTCGGCGCAACGGCGCTGGCGTGGGAGAGACAGCCGCCCCGATAGACGGCGTGCGGCTTAGGCCGCCGTTCAGCTCA
AACGCCGCAGCGCTTCGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MKGKERIVFLDRAAFVADDLPIPDFDHNWSEYPATEPADLVPRLFWATTAITHACALDAEVLAQLHKLKRIVVTGPALID
PAAGSANDRIVRHLPHSETPAATLIALLETLVREAEA

Sequences:

>Translated_117_residues
MKGKERIVFLDRAAFVADDLPIPDFDHNWSEYPATEPADLVPRLFWATTAITHACALDAEVLAQLHKLKRIVVTGPALID
PAAGSANDRIVRHLPHSETPAATLIALLETLVREAEA
>Mature_117_residues
MKGKERIVFLDRAAFVADDLPIPDFDHNWSEYPATEPADLVPRLFWATTAITHACALDAEVLAQLHKLKRIVVTGPALID
PAAGSANDRIVRHLPHSETPAATLIALLETLVREAEA

Specific function: Unknown

COG id: COG1052

COG function: function code CHR; Lactate dehydrogenase and related dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12800; Mature: 12800

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGKERIVFLDRAAFVADDLPIPDFDHNWSEYPATEPADLVPRLFWATTAITHACALDAE
CCCCCEEEEEECHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHH
VLAQLHKLKRIVVTGPALIDPAAGSANDRIVRHLPHSETPAATLIALLETLVREAEA
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKGKERIVFLDRAAFVADDLPIPDFDHNWSEYPATEPADLVPRLFWATTAITHACALDAE
CCCCCEEEEEECHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHH
VLAQLHKLKRIVVTGPALIDPAAGSANDRIVRHLPHSETPAATLIALLETLVREAEA
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA