| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is 74316098
Identifier: 74316098
GI number: 74316098
Start: 83013
End: 83366
Strand: Reverse
Name: 74316098
Synonym: Tbd_0080
Alternate gene names: NA
Gene position: 83366-83013 (Counterclockwise)
Preceding gene: 74316099
Following gene: 74316096
Centisome position: 2.86
GC content: 67.23
Gene sequence:
>354_bases GTGAAGGGCAAGGAGCGGATCGTCTTTCTCGATCGCGCCGCCTTCGTTGCGGACGACCTGCCCATCCCCGACTTCGATCA CAACTGGAGCGAGTATCCGGCCACCGAGCCGGCCGATCTCGTGCCGCGGCTGTTCTGGGCGACGACGGCGATCACCCACG CCTGCGCACTCGACGCCGAAGTGCTCGCGCAGTTGCACAAACTCAAACGCATTGTGGTGACCGGCCCCGCGCTGATCGAT CCCGCCGCAGGCTCGGCCAACGACCGCATCGTCCGCCACCTGCCGCACAGCGAGACGCCCGCCGCGACGCTGATCGCACT GCTCGAAACGCTGGTGCGCGAAGCCGAAGCGTAG
Upstream 100 bases:
>100_bases TGATCGCGCAGCAGATGAATGCATTGATGGGGGCCGGTGACAGCGAACTCGATTCCTCGGCCCTCATGCGGGCGCTCGAA CGGCTGACCGCCGACTCCAG
Downstream 100 bases:
>100_bases GGCGTCGGCGCAACGGCGCTGGCGTGGGAGAGACAGCCGCCCCGATAGACGGCGTGCGGCTTAGGCCGCCGTTCAGCTCA AACGCCGCAGCGCTTCGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MKGKERIVFLDRAAFVADDLPIPDFDHNWSEYPATEPADLVPRLFWATTAITHACALDAEVLAQLHKLKRIVVTGPALID PAAGSANDRIVRHLPHSETPAATLIALLETLVREAEA
Sequences:
>Translated_117_residues MKGKERIVFLDRAAFVADDLPIPDFDHNWSEYPATEPADLVPRLFWATTAITHACALDAEVLAQLHKLKRIVVTGPALID PAAGSANDRIVRHLPHSETPAATLIALLETLVREAEA >Mature_117_residues MKGKERIVFLDRAAFVADDLPIPDFDHNWSEYPATEPADLVPRLFWATTAITHACALDAEVLAQLHKLKRIVVTGPALID PAAGSANDRIVRHLPHSETPAATLIALLETLVREAEA
Specific function: Unknown
COG id: COG1052
COG function: function code CHR; Lactate dehydrogenase and related dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12800; Mature: 12800
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGKERIVFLDRAAFVADDLPIPDFDHNWSEYPATEPADLVPRLFWATTAITHACALDAE CCCCCEEEEEECHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHH VLAQLHKLKRIVVTGPALIDPAAGSANDRIVRHLPHSETPAATLIALLETLVREAEA HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKGKERIVFLDRAAFVADDLPIPDFDHNWSEYPATEPADLVPRLFWATTAITHACALDAE CCCCCEEEEEECHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHH VLAQLHKLKRIVVTGPALIDPAAGSANDRIVRHLPHSETPAATLIALLETLVREAEA HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA