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The map label for this gene is ntrY [H]

Identifier: 73543085

GI number: 73543085

Start: 3732350

End: 3734788

Strand: Reverse

Name: ntrY [H]

Synonym: Reut_A3403

Alternate gene names: 73543085

Gene position: 3734788-3732350 (Counterclockwise)

Preceding gene: 73543086

Following gene: 73543084

Centisome position: 98.12

GC content: 64.58

Gene sequence:

>2439_bases
ATGAACACCAGCGGTCTCTGGGACAGCCGGTTCCGTCGCGTGCTCTACCGGGTGGTAGCCGGGATCATTGTTTTCCTTGC
TCTCGTACTGGTCGGCCTGCTGGCCGGCGCATCGGCCAACACGGAATTCTTCGACCGCTACTTCACGCTGCTGTTCAAGG
TCAACCTGGTGATCGGCGCACTGCTGGTGATCACCGTCGGTGCGCTCGCGGTCACGCTATGGCTGCGCTATCGCCGCGGC
AAGTTCGGCACGCGGCTGATGACCAAGCTCGCCGTGTTCTTCGGCGTAGTCGGCGTGCTGCCCGGCGTGCTGATCTACCT
GGTGTCGCTGCAATTCGTTTCACGCAGCATCGAATCGTGGTTCGACGTGCGTGTGGAAACCGCGCTCGAAGCAGGCCTGA
ACCTGGGCCGCTCCACGATCGACAGCGCGCTGGCCGACCTGCAGGGCAAGGCGCGCCTGATGGCCGAGCAGTTGAGCGGC
CCGTCGGGCATGGCCACCTCGCTGCAACTGAACCGTCTGCGCGAACAATACGGCGTGCAGGAAGCCGCGATCTTCACGGG
CAGCGGACGCGTGCTGGCCACGGCATCGAGCAACTATGCCTCACTGGTACCGGACCTGCCTTCTGGCGTGCTCGCCGAGC
AGGCACGGCTGGCGGGCGGCTACGCTGCCGTCGAAGGCGGTACGGACCCATCCGTGGATGGCAACCACCCCGATCCGCGC
GTCGACAGCAGCCACCTGTACCGCCTGCGCGTGATCATTCCGCTCGGCGCGGCGCCAGCGGGCGACACGACCGCAGCCGC
AGCCAGCGCCCCACGTGTCGCCGCCGCGCCAAAGGCCCGCTGGGCGGGTTCCGGCCTGTCGGTGGAACGCCGGCCCGAAG
ACTCGCCATCGAGCGGCTTCGGCCTCGTGGGCGACACCGTGCGCGAGGAACGTTACCTGCAGGTGGTGCATCCCGTGCCG
GCCGTTCTCGCGCGCAATGCGGACGAAGTGCAGCGTGCCTACCAGGAATACCAGGAAAAGGCGCTGGGCCGCACCGGCCT
GCGCAAGATGTATATCGGCACGCTGACGCTCACGTTGTTCCTCGCCGTATTCATCGCGGTGATGCTCGCGCTGCTGCTCG
GCGGCCAGCTTGCGCGCCCGCTGCTGATGCTGTTGCAGGGAACCAAGGAAGTGGCCGAGGGCGACCTCTCGCCCAAGCGC
GAACTGAAGAGCCGCGACGAACTCGGCATGCTCACGCAGCAGTTCAACCAGATGACGCGCCAGCTTGCCGAAGCGCGCCT
GGCCGTGGAAGAGAACCGCGTGGCGCTGGAACAGTCCAAGGCGTATCTGGAAAGCGTGCTGCAGAACCTGACTGCAGGCG
TGCTGGTGTTCGACCGGCGCTTTGTACTGATTACCGCCAACCCCGGCGCCGAACGCATCTTCCGCCAGCCGTTCGCGGCC
GTGCTCGGACTGCCGGTCGAGCAGATTCCAGGCATGGGGCCGTTCGGCGAGATCGTGCGCCAGGCGTTTTCCGACCAGAA
CACGCGCGAGGTGCTGGGCGGCGCCGAGCACTGGCAAAAGCAGATCGAGCTTCCGCAGGGCCATGAAGAGCAGCCGTTGA
CGTTGCTCGTGCGTGGCGCGCACCTGCCCGGCGGCGAGCGTGACGAGCCTGGCTACGTGGTCGTGTTCGACGACATCTCC
GACGTGATTTCGGCGCAGCGGTCGGTAGCCTGGGGCGAGGTCGCACGGCGCCTCGCACACGAGATCAAGAACCCGCTCAC
GCCGATCCAGCTCTCGGCCGAGCGCCTGCAGATGAAGCTTTCGCCGAAACTCGAGGATAAAGACGCCGAGGTGCTAAAGC
GCGGTGCGGCCACGATCGTTAACCAGGTGGCGGCGATGAAACGCATGGTGGACGATTTCCGTGACTATGCGCGCACGCCG
CCCGCCATGCTGCAGTCGCTGCAGATCAATGCGCTGGTGACTGAAGTGCTGCACCTGTATGGCATCGATGACCCGGCGGT
ACATGAACATCCGGTGATCCATGCGACGCTGAACGCGGACCTTCCCGAGATCAAGGGAGATCCGACACAGCTGCGCCAGG
TGATCCACAACCTGTTGCAGAACTCGCAGGATGCCGCGGCCGAGAACGTCGCGGCTGGTAGGGCGGCGCCCCATATCGCT
CTACACACCGAGACGGTAGAATATAAAGATTCTGCCGGCGAAAACCGCCAGGCAGTCAAGCTAACCATTGCGGACAATGG
TCCGGGCTTTGCACCTCGCATCCTGAGCCGTGCGTTCGAGCCTTATGTGACCACCAAGGCCAAGGGTACGGGGCTCGGGC
TGGCGATGGTAAAGAAGATCATTGACGAACACGGCGCGCGCATTGAACTGCGCAATCGAATGGAAGGTGCCGAGATCGTC
GGTGCACAGATCTCGATCCTGTTCGTTAAACTGGCATAG

Upstream 100 bases:

>100_bases
CGCCGTCCGCATCGGCCGATCCGCGCATCGGCCCCTTCGTGCAGGCGGTGTCGACAGCGCTGTCGCCTGCCACGCTCGTG
CAGTCGGTGCCGGGCCAGCC

Downstream 100 bases:

>100_bases
TCAACTTGGCGGTCCGTCACGGAACGCTTTGGTGGGGTTAAGAGGGGAAGTATGGCAACGATCCTCGTAGTCGATGACGA
AATGGGAATCCGGGAACTGC

Product: multi-sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 812; Mature: 812

Protein sequence:

>812_residues
MNTSGLWDSRFRRVLYRVVAGIIVFLALVLVGLLAGASANTEFFDRYFTLLFKVNLVIGALLVITVGALAVTLWLRYRRG
KFGTRLMTKLAVFFGVVGVLPGVLIYLVSLQFVSRSIESWFDVRVETALEAGLNLGRSTIDSALADLQGKARLMAEQLSG
PSGMATSLQLNRLREQYGVQEAAIFTGSGRVLATASSNYASLVPDLPSGVLAEQARLAGGYAAVEGGTDPSVDGNHPDPR
VDSSHLYRLRVIIPLGAAPAGDTTAAAASAPRVAAAPKARWAGSGLSVERRPEDSPSSGFGLVGDTVREERYLQVVHPVP
AVLARNADEVQRAYQEYQEKALGRTGLRKMYIGTLTLTLFLAVFIAVMLALLLGGQLARPLLMLLQGTKEVAEGDLSPKR
ELKSRDELGMLTQQFNQMTRQLAEARLAVEENRVALEQSKAYLESVLQNLTAGVLVFDRRFVLITANPGAERIFRQPFAA
VLGLPVEQIPGMGPFGEIVRQAFSDQNTREVLGGAEHWQKQIELPQGHEEQPLTLLVRGAHLPGGERDEPGYVVVFDDIS
DVISAQRSVAWGEVARRLAHEIKNPLTPIQLSAERLQMKLSPKLEDKDAEVLKRGAATIVNQVAAMKRMVDDFRDYARTP
PAMLQSLQINALVTEVLHLYGIDDPAVHEHPVIHATLNADLPEIKGDPTQLRQVIHNLLQNSQDAAAENVAAGRAAPHIA
LHTETVEYKDSAGENRQAVKLTIADNGPGFAPRILSRAFEPYVTTKAKGTGLGLAMVKKIIDEHGARIELRNRMEGAEIV
GAQISILFVKLA

Sequences:

>Translated_812_residues
MNTSGLWDSRFRRVLYRVVAGIIVFLALVLVGLLAGASANTEFFDRYFTLLFKVNLVIGALLVITVGALAVTLWLRYRRG
KFGTRLMTKLAVFFGVVGVLPGVLIYLVSLQFVSRSIESWFDVRVETALEAGLNLGRSTIDSALADLQGKARLMAEQLSG
PSGMATSLQLNRLREQYGVQEAAIFTGSGRVLATASSNYASLVPDLPSGVLAEQARLAGGYAAVEGGTDPSVDGNHPDPR
VDSSHLYRLRVIIPLGAAPAGDTTAAAASAPRVAAAPKARWAGSGLSVERRPEDSPSSGFGLVGDTVREERYLQVVHPVP
AVLARNADEVQRAYQEYQEKALGRTGLRKMYIGTLTLTLFLAVFIAVMLALLLGGQLARPLLMLLQGTKEVAEGDLSPKR
ELKSRDELGMLTQQFNQMTRQLAEARLAVEENRVALEQSKAYLESVLQNLTAGVLVFDRRFVLITANPGAERIFRQPFAA
VLGLPVEQIPGMGPFGEIVRQAFSDQNTREVLGGAEHWQKQIELPQGHEEQPLTLLVRGAHLPGGERDEPGYVVVFDDIS
DVISAQRSVAWGEVARRLAHEIKNPLTPIQLSAERLQMKLSPKLEDKDAEVLKRGAATIVNQVAAMKRMVDDFRDYARTP
PAMLQSLQINALVTEVLHLYGIDDPAVHEHPVIHATLNADLPEIKGDPTQLRQVIHNLLQNSQDAAAENVAAGRAAPHIA
LHTETVEYKDSAGENRQAVKLTIADNGPGFAPRILSRAFEPYVTTKAKGTGLGLAMVKKIIDEHGARIELRNRMEGAEIV
GAQISILFVKLA
>Mature_812_residues
MNTSGLWDSRFRRVLYRVVAGIIVFLALVLVGLLAGASANTEFFDRYFTLLFKVNLVIGALLVITVGALAVTLWLRYRRG
KFGTRLMTKLAVFFGVVGVLPGVLIYLVSLQFVSRSIESWFDVRVETALEAGLNLGRSTIDSALADLQGKARLMAEQLSG
PSGMATSLQLNRLREQYGVQEAAIFTGSGRVLATASSNYASLVPDLPSGVLAEQARLAGGYAAVEGGTDPSVDGNHPDPR
VDSSHLYRLRVIIPLGAAPAGDTTAAAASAPRVAAAPKARWAGSGLSVERRPEDSPSSGFGLVGDTVREERYLQVVHPVP
AVLARNADEVQRAYQEYQEKALGRTGLRKMYIGTLTLTLFLAVFIAVMLALLLGGQLARPLLMLLQGTKEVAEGDLSPKR
ELKSRDELGMLTQQFNQMTRQLAEARLAVEENRVALEQSKAYLESVLQNLTAGVLVFDRRFVLITANPGAERIFRQPFAA
VLGLPVEQIPGMGPFGEIVRQAFSDQNTREVLGGAEHWQKQIELPQGHEEQPLTLLVRGAHLPGGERDEPGYVVVFDDIS
DVISAQRSVAWGEVARRLAHEIKNPLTPIQLSAERLQMKLSPKLEDKDAEVLKRGAATIVNQVAAMKRMVDDFRDYARTP
PAMLQSLQINALVTEVLHLYGIDDPAVHEHPVIHATLNADLPEIKGDPTQLRQVIHNLLQNSQDAAAENVAAGRAAPHIA
LHTETVEYKDSAGENRQAVKLTIADNGPGFAPRILSRAFEPYVTTKAKGTGLGLAMVKKIIDEHGARIELRNRMEGAEIV
GAQISILFVKLA

Specific function: Member of the two-component regulatory system ntrY/ntrX involved in nitrogen level control. Probably activates ntrX by phosphorylation [H]

COG id: COG5000

COG function: function code T; Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=391, Percent_Identity=25.8312020460358, Blast_Score=112, Evalue=1e-25,
Organism=Escherichia coli, GI1790436, Length=225, Percent_Identity=30.6666666666667, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI1790300, Length=360, Percent_Identity=25.2777777777778, Blast_Score=94, Evalue=4e-20,
Organism=Escherichia coli, GI1786912, Length=228, Percent_Identity=31.140350877193, Blast_Score=66, Evalue=1e-11,
Organism=Escherichia coli, GI1789808, Length=218, Percent_Identity=24.3119266055046, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR000014
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR017232 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 88255; Mature: 88255

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSGLWDSRFRRVLYRVVAGIIVFLALVLVGLLAGASANTEFFDRYFTLLFKVNLVIGA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
LLVITVGALAVTLWLRYRRGKFGTRLMTKLAVFFGVVGVLPGVLIYLVSLQFVSRSIESW
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FDVRVETALEAGLNLGRSTIDSALADLQGKARLMAEQLSGPSGMATSLQLNRLREQYGVQ
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
EAAIFTGSGRVLATASSNYASLVPDLPSGVLAEQARLAGGYAAVEGGTDPSVDGNHPDPR
CEEEEECCCCEEEECCCCCHHHCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCC
VDSSHLYRLRVIIPLGAAPAGDTTAAAASAPRVAAAPKARWAGSGLSVERRPEDSPSSGF
CCCCCEEEEEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GLVGDTVREERYLQVVHPVPAVLARNADEVQRAYQEYQEKALGRTGLRKMYIGTLTLTLF
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAVFIAVMLALLLGGQLARPLLMLLQGTKEVAEGDLSPKRELKSRDELGMLTQQFNQMTR
HHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHCCCCCCHHHHHCHHHHHHHHHHHHHHHH
QLAEARLAVEENRVALEQSKAYLESVLQNLTAGVLVFDRRFVLITANPGAERIFRQPFAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECEEEEEECCCCHHHHHHHHHHH
VLGLPVEQIPGMGPFGEIVRQAFSDQNTREVLGGAEHWQKQIELPQGHEEQPLTLLVRGA
HHCCCHHHCCCCCCHHHHHHHHHCCCCHHHHHCCHHHHHHHCCCCCCCCCCCEEEEEECC
HLPGGERDEPGYVVVFDDISDVISAQRSVAWGEVARRLAHEIKNPLTPIQLSAERLQMKL
CCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHC
SPKLEDKDAEVLKRGAATIVNQVAAMKRMVDDFRDYARTPPAMLQSLQINALVTEVLHLY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
GIDDPAVHEHPVIHATLNADLPEIKGDPTQLRQVIHNLLQNSQDAAAENVAAGRAAPHIA
CCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEE
LHTETVEYKDSAGENRQAVKLTIADNGPGFAPRILSRAFEPYVTTKAKGTGLGLAMVKKI
EECCEECCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCEECCCCCCCHHHHHHHHH
IDEHGARIELRNRMEGAEIVGAQISILFVKLA
HHHCCCEEEEHHCCCCHHHHCCEEEEEEEEEC
>Mature Secondary Structure
MNTSGLWDSRFRRVLYRVVAGIIVFLALVLVGLLAGASANTEFFDRYFTLLFKVNLVIGA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
LLVITVGALAVTLWLRYRRGKFGTRLMTKLAVFFGVVGVLPGVLIYLVSLQFVSRSIESW
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FDVRVETALEAGLNLGRSTIDSALADLQGKARLMAEQLSGPSGMATSLQLNRLREQYGVQ
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
EAAIFTGSGRVLATASSNYASLVPDLPSGVLAEQARLAGGYAAVEGGTDPSVDGNHPDPR
CEEEEECCCCEEEECCCCCHHHCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCC
VDSSHLYRLRVIIPLGAAPAGDTTAAAASAPRVAAAPKARWAGSGLSVERRPEDSPSSGF
CCCCCEEEEEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GLVGDTVREERYLQVVHPVPAVLARNADEVQRAYQEYQEKALGRTGLRKMYIGTLTLTLF
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAVFIAVMLALLLGGQLARPLLMLLQGTKEVAEGDLSPKRELKSRDELGMLTQQFNQMTR
HHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHCCCCCCHHHHHCHHHHHHHHHHHHHHHH
QLAEARLAVEENRVALEQSKAYLESVLQNLTAGVLVFDRRFVLITANPGAERIFRQPFAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECEEEEEECCCCHHHHHHHHHHH
VLGLPVEQIPGMGPFGEIVRQAFSDQNTREVLGGAEHWQKQIELPQGHEEQPLTLLVRGA
HHCCCHHHCCCCCCHHHHHHHHHCCCCHHHHHCCHHHHHHHCCCCCCCCCCCEEEEEECC
HLPGGERDEPGYVVVFDDISDVISAQRSVAWGEVARRLAHEIKNPLTPIQLSAERLQMKL
CCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHC
SPKLEDKDAEVLKRGAATIVNQVAAMKRMVDDFRDYARTPPAMLQSLQINALVTEVLHLY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
GIDDPAVHEHPVIHATLNADLPEIKGDPTQLRQVIHNLLQNSQDAAAENVAAGRAAPHIA
CCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEE
LHTETVEYKDSAGENRQAVKLTIADNGPGFAPRILSRAFEPYVTTKAKGTGLGLAMVKKI
EECCEECCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCEECCCCCCCHHHHHHHHH
IDEHGARIELRNRMEGAEIVGAQISILFVKLA
HHHCCCEEEEHHCCCCHHHHCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1661370 [H]