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The map label for this gene is yedQ [H]

Identifier: 73543082

GI number: 73543082

Start: 3728971

End: 3730725

Strand: Direct

Name: yedQ [H]

Synonym: Reut_A3400

Alternate gene names: 73543082

Gene position: 3728971-3730725 (Clockwise)

Preceding gene: 73543079

Following gene: 73543091

Centisome position: 97.96

GC content: 65.93

Gene sequence:

>1755_bases
ATGTGGCGTCGTTCGCTGCCGCAGCCGCGCTGGCTGCCCCGTCTTGCGGTCATGCGGCCCCATCGCGTGGTGGTCGGCTG
TTTCGCCGTGGTGTTGCTGCTTGCGTTGGTGGTTGGATTGCGCGACGTGTACCTGGTGCGCGAGCGCGACCTGCGGGCTC
GCCAGCACAATCTCGAACTGCGCGCCCTTGGCGTCGAAGCGGTGCTGGAAGGCGAACGGCGACGGCTCGAGTACCTGAGC
ACCTACGCGGAGCGTCTGTTCGAGATCCAGGCGAGCGCGGATGCAGTGGCGCCCGATGCGGCGATCCGCCAGGCCTACGC
GCAGCGCAATGCCACAGTCTGGCAGATGAAGCTGCCACTGGATGGCCCGGCCCTGATCGGCGTCGGCCCGGCGGGACTGA
CAGGCCTGCGCAGCTTCGACCGCCGCGACCCGGATCTCATGGCCGATCTGTACGTGGGACGGATGATCAGCGAGCTGCTG
GGCCTCAGCATCCGCGCGGACCACGTTCAGGGCAACGCGATATTCATCTCAAGCAACGGCTTCTTCGTGGCCTACCCGGC
GATCGACCCGGCCGTGGCCCCAAGCATGATGCAACGCTTCGACAGCATGCCGTACTACCGTGGCCAGACCCCCGAGGTGA
ATCCCGGCCGCGAGCTCTACTGGGTACCCATGTACGACGATTTCCAGAGCAAGCGGCGCATGACCACGCTCAGTGTGCCG
ATCTATGCCGGCCAGCAGTTCCGCGGCGTCGTGGCGATCGACGTCGAGCAGAAGCGCCTTGACGAGCTGCTGCGTGCTGC
CAGCGATCCCGGCGCGGTCCAGTACATGATGAACGCCCATGGCGATGTGCTGGCGATCAGCGATGACCCGGTCCGAAAGG
TACAGAAATGGCCCGACGCCGTACCCGGGAACTGGAAGGATTTCGCGCCAGCGGACCTGTTCGCACGCGGTAGCGGCATG
GTGAAGCACGACGGCGACTATCTGCTGTTCCATCGCGCGCCGCAGAGTCCCTGGCTGCTGATGGACCTGGTGCCGGCGCG
CAAACTCTACGCGAGCATGTTCGCGAGCATGAGCCGGCCGCTGCTGATGATCTGGGTGCTGCTGCCCTTGCTGCTATGGA
TCACGCTCAAGGTCGTGACGCAGCTGTTCGACCATTACATCGCGCTCGGTGAAAAGCTGCAGGAGATCGCGCGGCAAGAC
CCGCTTACGGGGCTGGCCAACCGGCGCCGCATGCGCGAACTGGCGCAGTCCGAATTCGAGCGCCAGAAGCGAGACGGCCA
GCCGCTGGCACTGGTCATGATCGATATCGACTTCTTCAAGAAGGTAAATGACCACTGGGGTCATGCGAGCGGCGACAAGG
TACTCGTCGAACTCGCCCGCACGATGCGTGCAAACCTGCGCAACGTCGATCAGCCGGCGCGGCTTGGCGGCGAGGAGTTC
GCCGTGCTGATGCCAAATACGAGCCTGGCCGAGGCCGCACAGAGCGCGGAGCGGCTGCGACGTGCCATCGCGGCATGCGT
GGTCGAAGCCGACCTCGAGGCCTGCGTCGAACGGGCCGACCGCATCATCCGCTTCACCATTTCCGTGGGCGTCGCCGAAG
CGCGGGGCGAGGCTGCCGACGGTGTGCCGATGACGCTCGATGGCCTGGCCGCCATCGCCGACCGGCGTCTCTACGACGCC
AAGACGCAAGGCCGCAACCGCGTGGTCAGCGACGACAACGCGCACGCTGCGGCTGTGCCGCAGGTGCAGGCGTAA

Upstream 100 bases:

>100_bases
CCCGGTGTGCGCCGCGCGTTCATGCTGTCCTACACTGAGCTGTTTGCCACGTCCCACTGACCTGCCGGGCAAGGCCCGCC
ATCAGACAGGAGAGCGCCCC

Downstream 100 bases:

>100_bases
TCTGGAGAGGGGCAGCTGCGCTCAGCGCAGCAGGAACGCGATGTCGTCGACGCCGATCCGCGCGACCGGAATGCCCCGGC
GCCGCTGGAACAGGATGTGC

Product: GGDEF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 584; Mature: 584

Protein sequence:

>584_residues
MWRRSLPQPRWLPRLAVMRPHRVVVGCFAVVLLLALVVGLRDVYLVRERDLRARQHNLELRALGVEAVLEGERRRLEYLS
TYAERLFEIQASADAVAPDAAIRQAYAQRNATVWQMKLPLDGPALIGVGPAGLTGLRSFDRRDPDLMADLYVGRMISELL
GLSIRADHVQGNAIFISSNGFFVAYPAIDPAVAPSMMQRFDSMPYYRGQTPEVNPGRELYWVPMYDDFQSKRRMTTLSVP
IYAGQQFRGVVAIDVEQKRLDELLRAASDPGAVQYMMNAHGDVLAISDDPVRKVQKWPDAVPGNWKDFAPADLFARGSGM
VKHDGDYLLFHRAPQSPWLLMDLVPARKLYASMFASMSRPLLMIWVLLPLLLWITLKVVTQLFDHYIALGEKLQEIARQD
PLTGLANRRRMRELAQSEFERQKRDGQPLALVMIDIDFFKKVNDHWGHASGDKVLVELARTMRANLRNVDQPARLGGEEF
AVLMPNTSLAEAAQSAERLRRAIAACVVEADLEACVERADRIIRFTISVGVAEARGEAADGVPMTLDGLAAIADRRLYDA
KTQGRNRVVSDDNAHAAAVPQVQA

Sequences:

>Translated_584_residues
MWRRSLPQPRWLPRLAVMRPHRVVVGCFAVVLLLALVVGLRDVYLVRERDLRARQHNLELRALGVEAVLEGERRRLEYLS
TYAERLFEIQASADAVAPDAAIRQAYAQRNATVWQMKLPLDGPALIGVGPAGLTGLRSFDRRDPDLMADLYVGRMISELL
GLSIRADHVQGNAIFISSNGFFVAYPAIDPAVAPSMMQRFDSMPYYRGQTPEVNPGRELYWVPMYDDFQSKRRMTTLSVP
IYAGQQFRGVVAIDVEQKRLDELLRAASDPGAVQYMMNAHGDVLAISDDPVRKVQKWPDAVPGNWKDFAPADLFARGSGM
VKHDGDYLLFHRAPQSPWLLMDLVPARKLYASMFASMSRPLLMIWVLLPLLLWITLKVVTQLFDHYIALGEKLQEIARQD
PLTGLANRRRMRELAQSEFERQKRDGQPLALVMIDIDFFKKVNDHWGHASGDKVLVELARTMRANLRNVDQPARLGGEEF
AVLMPNTSLAEAAQSAERLRRAIAACVVEADLEACVERADRIIRFTISVGVAEARGEAADGVPMTLDGLAAIADRRLYDA
KTQGRNRVVSDDNAHAAAVPQVQA
>Mature_584_residues
MWRRSLPQPRWLPRLAVMRPHRVVVGCFAVVLLLALVVGLRDVYLVRERDLRARQHNLELRALGVEAVLEGERRRLEYLS
TYAERLFEIQASADAVAPDAAIRQAYAQRNATVWQMKLPLDGPALIGVGPAGLTGLRSFDRRDPDLMADLYVGRMISELL
GLSIRADHVQGNAIFISSNGFFVAYPAIDPAVAPSMMQRFDSMPYYRGQTPEVNPGRELYWVPMYDDFQSKRRMTTLSVP
IYAGQQFRGVVAIDVEQKRLDELLRAASDPGAVQYMMNAHGDVLAISDDPVRKVQKWPDAVPGNWKDFAPADLFARGSGM
VKHDGDYLLFHRAPQSPWLLMDLVPARKLYASMFASMSRPLLMIWVLLPLLLWITLKVVTQLFDHYIALGEKLQEIARQD
PLTGLANRRRMRELAQSEFERQKRDGQPLALVMIDIDFFKKVNDHWGHASGDKVLVELARTMRANLRNVDQPARLGGEEF
AVLMPNTSLAEAAQSAERLRRAIAACVVEADLEACVERADRIIRFTISVGVAEARGEAADGVPMTLDGLAAIADRRLYDA
KTQGRNRVVSDDNAHAAAVPQVQA

Specific function: Involves in the regulation of cellulose production [H]

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI87082007, Length=584, Percent_Identity=27.2260273972603, Blast_Score=182, Evalue=4e-47,
Organism=Escherichia coli, GI87081881, Length=182, Percent_Identity=36.8131868131868, Blast_Score=112, Evalue=9e-26,
Organism=Escherichia coli, GI1786584, Length=213, Percent_Identity=31.924882629108, Blast_Score=105, Evalue=6e-24,
Organism=Escherichia coli, GI145693134, Length=184, Percent_Identity=35.3260869565217, Blast_Score=102, Evalue=5e-23,
Organism=Escherichia coli, GI1787262, Length=206, Percent_Identity=32.0388349514563, Blast_Score=96, Evalue=5e-21,
Organism=Escherichia coli, GI1787802, Length=170, Percent_Identity=32.9411764705882, Blast_Score=87, Evalue=4e-18,
Organism=Escherichia coli, GI1788085, Length=176, Percent_Identity=30.6818181818182, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1788381, Length=194, Percent_Identity=35.0515463917526, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI87081974, Length=305, Percent_Identity=21.3114754098361, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1787816, Length=175, Percent_Identity=34.8571428571429, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI1787541, Length=183, Percent_Identity=32.2404371584699, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1788956, Length=184, Percent_Identity=30.9782608695652, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI87081977, Length=138, Percent_Identity=34.0579710144928, Blast_Score=70, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160 [H]

Pfam domain/function: PF00990 GGDEF [H]

EC number: NA

Molecular weight: Translated: 65453; Mature: 65453

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWRRSLPQPRWLPRLAVMRPHRVVVGCFAVVLLLALVVGLRDVYLVRERDLRARQHNLEL
CCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
RALGVEAVLEGERRRLEYLSTYAERLFEIQASADAVAPDAAIRQAYAQRNATVWQMKLPL
EEECHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCC
DGPALIGVGPAGLTGLRSFDRRDPDLMADLYVGRMISELLGLSIRADHVQGNAIFISSNG
CCCEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCC
FFVAYPAIDPAVAPSMMQRFDSMPYYRGQTPEVNPGRELYWVPMYDDFQSKRRMTTLSVP
EEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHCCEEEEEEE
IYAGQQFRGVVAIDVEQKRLDELLRAASDPGAVQYMMNAHGDVLAISDDPVRKVQKWPDA
EECCCCCCCEEEEECCHHHHHHHHHHCCCCCHHHHHCCCCCCEEEECCCHHHHHHHCCCC
VPGNWKDFAPADLFARGSGMVKHDGDYLLFHRAPQSPWLLMDLVPARKLYASMFASMSRP
CCCCCCCCCCHHHHHCCCCCEEECCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHCCH
LLMIWVLLPLLLWITLKVVTQLFDHYIALGEKLQEIARQDPLTGLANRRRMRELAQSEFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
RQKRDGQPLALVMIDIDFFKKVNDHWGHASGDKVLVELARTMRANLRNVDQPARLGGEEF
HHHHCCCCEEEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCE
AVLMPNTSLAEAAQSAERLRRAIAACVVEADLEACVERADRIIRFTISVGVAEARGEAAD
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECHHHHCCCCCC
GVPMTLDGLAAIADRRLYDAKTQGRNRVVSDDNAHAAAVPQVQA
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCC
>Mature Secondary Structure
MWRRSLPQPRWLPRLAVMRPHRVVVGCFAVVLLLALVVGLRDVYLVRERDLRARQHNLEL
CCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
RALGVEAVLEGERRRLEYLSTYAERLFEIQASADAVAPDAAIRQAYAQRNATVWQMKLPL
EEECHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCC
DGPALIGVGPAGLTGLRSFDRRDPDLMADLYVGRMISELLGLSIRADHVQGNAIFISSNG
CCCEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCC
FFVAYPAIDPAVAPSMMQRFDSMPYYRGQTPEVNPGRELYWVPMYDDFQSKRRMTTLSVP
EEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHCCEEEEEEE
IYAGQQFRGVVAIDVEQKRLDELLRAASDPGAVQYMMNAHGDVLAISDDPVRKVQKWPDA
EECCCCCCCEEEEECCHHHHHHHHHHCCCCCHHHHHCCCCCCEEEECCCHHHHHHHCCCC
VPGNWKDFAPADLFARGSGMVKHDGDYLLFHRAPQSPWLLMDLVPARKLYASMFASMSRP
CCCCCCCCCCHHHHHCCCCCEEECCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHCCH
LLMIWVLLPLLLWITLKVVTQLFDHYIALGEKLQEIARQDPLTGLANRRRMRELAQSEFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
RQKRDGQPLALVMIDIDFFKKVNDHWGHASGDKVLVELARTMRANLRNVDQPARLGGEEF
HHHHCCCCEEEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCE
AVLMPNTSLAEAAQSAERLRRAIAACVVEADLEACVERADRIIRFTISVGVAEARGEAAD
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECHHHHCCCCCC
GVPMTLDGLAAIADRRLYDAKTQGRNRVVSDDNAHAAAVPQVQA
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]