| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is 73543079
Identifier: 73543079
GI number: 73543079
Start: 3725453
End: 3727111
Strand: Direct
Name: 73543079
Synonym: Reut_A3397
Alternate gene names: NA
Gene position: 3725453-3727111 (Clockwise)
Preceding gene: 73543075
Following gene: 73543082
Centisome position: 97.87
GC content: 70.64
Gene sequence:
>1659_bases ATGCTGTCCCGACTCCCTGTTGCCTCCTGTCGTTGCTTTCCCCGCCGCCGCCTGAGTGCCGCCGTTCTGGCCGCCTGGGG GATGGTGGCTTGCGCGCAGACGCAGCAGGGCGCCCAGTCCCTCTCCATCACCCCGCCTCGCATACAGGATGCGCGCCCCG CGCCTGCCGTGCTGGCCATGGCGACGCCCCAGGACGATCCGCTCGGCGCCCTGATCGCCGGTGAGACGCCTCCTGCTGCC GCGGCACCGCAAACGGCGCCTGCACCGGCACCCGCCGAGGCATCGGCCGGTGCGCAGGTGGCCGGTGCGCAGGTGGCCCA AGCCGCCGCGCCGGTCGACGACACGTTCGTCGGCCCGCCTGATTCCGCGGCTCCGCCTGCCCCGCCTACCCCACCCCTGG TGCTGTTCCCGTCGCGGCTCGGGCATTTCGTGGCTGAACCCCCGGCCGAACCGATTGCCGATGCGGCCAGCGCCGAAGAG ACGCCATCAGACGCGCCGCCGGTGCTGCGCTCGCAGTTGCCGGCCGACGATGCGGCGGTAGATTCGGTCTGGCGACTCAG CTACAGCGGCCGTGCCGCCGCCGAGGACCGCGACGCCACCATGCGCGCGTGTGCCGGCGGCGCGCTGTCCACCGGCATCG GCCACGGTCTGGCGTGCCGCAGTTCGGGCGAGGTGAGGATCCGCGAGTCGGTGCTCAACCTCGACGGCGGCGCGCAGGTC ATGCTGATCGCCCAGGCCCGCGGCACCGATGCGACCTCGGTCAACGGCCGCCCCGCCGCCGTCGATCCCTACGCGCTGGT GCCGCAGTTCTATACGGCGGTGAGCGGCCTGTCGGTGCTCGACGGCGCCACCATGTGGGCCGGCCGCCGCGACAGCAGCC CGTTCCTGATGTCGTCAGGCCTGCTGCCCCCGAATTCCACGGCCATGCGCTTCGGCGTGGACAATGCACGCATGATCGGC GATGTCGGCCTGAGCTACCAATACACGGCCCGAAACGAGCAGAACGGACAGAACCAGCCGAGCTACCACTCGGTGCGCAC GGCGCCGATCACGACCAACGAGCAGGGCTCGGTGCAGCTTGGCTTTACGCGGGTCGAGGCCCAGTCGCTGGTCGCCGATT CCGGCAGCGCGTGGTGGGCGTCGGCGCTTCATGAACAGAAAGGTGTGCTCGCCGGGACCAACCGTGTCGGGCTGCAGTTC GGCTCCGGCGCCCGCAGCGCCATGGCAGGCTACACGGGCATGGGCCCGGCGCTGTCGCGCGTGCGCGTCGCGGAATCGCT CGAATGGAAGGGCCGGTCCGGCCTGGGCGGCTCGGTCGAATCGAGCATGCAGTTCGATCGTTCGCCCATTGGCACGCTGC AATGGGCCGCCACGCGGATCCGTCCAGCCTATGTGGCGAGCGACCAGTTCAAGATGGTTTTCGAAGTTGCGCGTGACCAG ATCTCGTCAGGCTTCGGCGCGAGCGGCCAGCGCACCGCGCTGACGATCGCGCCGACGCTGACGCTGGGCAAGTCGGCGGG CAACGCGAACCTGCGCGCGTTCTATACCTACAGCCGCGCCAACGACGTGGAGGGCATCGCGTTCACGGCGCCGGCCGAGG CCTGGGCCACGCAGAACAGCGGCTCGATCTTCGGCGTCCAGCTCAATCGGCGCTGGTAG
Upstream 100 bases:
>100_bases CACGCAGTGATGGATTTTGTAACCCGTCTTGCAGTCAAATCGTGCGGCTGTTAAAAAAAGACCCCCGTACCGGCGGTCTG GCCGCCTGGTCGTTCGTTGC
Downstream 100 bases:
>100_bases CGGCCGGCTTGCCCGCGCGCCAGCGCGCAGCGGTTGCGCGCTTTTCCCCGCGTTCCGCCCTTTCGGGGATCTCTGCCGGC TTGCGGCACAGCCAATGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Maltoporin; Porin LamB Type; Maltoporin-Like Channel
Number of amino acids: Translated: 552; Mature: 552
Protein sequence:
>552_residues MLSRLPVASCRCFPRRRLSAAVLAAWGMVACAQTQQGAQSLSITPPRIQDARPAPAVLAMATPQDDPLGALIAGETPPAA AAPQTAPAPAPAEASAGAQVAGAQVAQAAAPVDDTFVGPPDSAAPPAPPTPPLVLFPSRLGHFVAEPPAEPIADAASAEE TPSDAPPVLRSQLPADDAAVDSVWRLSYSGRAAAEDRDATMRACAGGALSTGIGHGLACRSSGEVRIRESVLNLDGGAQV MLIAQARGTDATSVNGRPAAVDPYALVPQFYTAVSGLSVLDGATMWAGRRDSSPFLMSSGLLPPNSTAMRFGVDNARMIG DVGLSYQYTARNEQNGQNQPSYHSVRTAPITTNEQGSVQLGFTRVEAQSLVADSGSAWWASALHEQKGVLAGTNRVGLQF GSGARSAMAGYTGMGPALSRVRVAESLEWKGRSGLGGSVESSMQFDRSPIGTLQWAATRIRPAYVASDQFKMVFEVARDQ ISSGFGASGQRTALTIAPTLTLGKSAGNANLRAFYTYSRANDVEGIAFTAPAEAWATQNSGSIFGVQLNRRW
Sequences:
>Translated_552_residues MLSRLPVASCRCFPRRRLSAAVLAAWGMVACAQTQQGAQSLSITPPRIQDARPAPAVLAMATPQDDPLGALIAGETPPAA AAPQTAPAPAPAEASAGAQVAGAQVAQAAAPVDDTFVGPPDSAAPPAPPTPPLVLFPSRLGHFVAEPPAEPIADAASAEE TPSDAPPVLRSQLPADDAAVDSVWRLSYSGRAAAEDRDATMRACAGGALSTGIGHGLACRSSGEVRIRESVLNLDGGAQV MLIAQARGTDATSVNGRPAAVDPYALVPQFYTAVSGLSVLDGATMWAGRRDSSPFLMSSGLLPPNSTAMRFGVDNARMIG DVGLSYQYTARNEQNGQNQPSYHSVRTAPITTNEQGSVQLGFTRVEAQSLVADSGSAWWASALHEQKGVLAGTNRVGLQF GSGARSAMAGYTGMGPALSRVRVAESLEWKGRSGLGGSVESSMQFDRSPIGTLQWAATRIRPAYVASDQFKMVFEVARDQ ISSGFGASGQRTALTIAPTLTLGKSAGNANLRAFYTYSRANDVEGIAFTAPAEAWATQNSGSIFGVQLNRRW >Mature_552_residues MLSRLPVASCRCFPRRRLSAAVLAAWGMVACAQTQQGAQSLSITPPRIQDARPAPAVLAMATPQDDPLGALIAGETPPAA AAPQTAPAPAPAEASAGAQVAGAQVAQAAAPVDDTFVGPPDSAAPPAPPTPPLVLFPSRLGHFVAEPPAEPIADAASAEE TPSDAPPVLRSQLPADDAAVDSVWRLSYSGRAAAEDRDATMRACAGGALSTGIGHGLACRSSGEVRIRESVLNLDGGAQV MLIAQARGTDATSVNGRPAAVDPYALVPQFYTAVSGLSVLDGATMWAGRRDSSPFLMSSGLLPPNSTAMRFGVDNARMIG DVGLSYQYTARNEQNGQNQPSYHSVRTAPITTNEQGSVQLGFTRVEAQSLVADSGSAWWASALHEQKGVLAGTNRVGLQF GSGARSAMAGYTGMGPALSRVRVAESLEWKGRSGLGGSVESSMQFDRSPIGTLQWAATRIRPAYVASDQFKMVFEVARDQ ISSGFGASGQRTALTIAPTLTLGKSAGNANLRAFYTYSRANDVEGIAFTAPAEAWATQNSGSIFGVQLNRRW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57229; Mature: 57229
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRLPVASCRCFPRRRLSAAVLAAWGMVACAQTQQGAQSLSITPPRIQDARPAPAVLAM CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCEEEEE ATPQDDPLGALIAGETPPAAAAPQTAPAPAPAEASAGAQVAGAQVAQAAAPVDDTFVGPP ECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC DSAAPPAPPTPPLVLFPSRLGHFVAEPPAEPIADAASAEETPSDAPPVLRSQLPADDAAV CCCCCCCCCCCCEEECHHHHCHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHCCCCCHHHH DSVWRLSYSGRAAAEDRDATMRACAGGALSTGIGHGLACRSSGEVRIRESVLNLDGGAQV HHHHEECCCCCCCCCCHHHHHHHHCCCHHHHCCCCCEEECCCCCEEEEEHHHCCCCCCEE MLIAQARGTDATSVNGRPAAVDPYALVPQFYTAVSGLSVLDGATMWAGRRDSSPFLMSSG EEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCCHHCCCCCCCCCEEEECC LLPPNSTAMRFGVDNARMIGDVGLSYQYTARNEQNGQNQPSYHSVRTAPITTNEQGSVQL CCCCCCCEEEECCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCEEE GFTRVEAQSLVADSGSAWWASALHEQKGVLAGTNRVGLQFGSGARSAMAGYTGMGPALSR EEEEEHHHHHHHCCCCHHHHHHHHHHCCEEECCCCEEEEECCCCHHHHCCCCCCCHHHHH VRVAESLEWKGRSGLGGSVESSMQFDRSPIGTLQWAATRIRPAYVASDQFKMVFEVARDQ HHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHCCEEEECCCHHHHHHHHHHHH ISSGFGASGQRTALTIAPTLTLGKSAGNANLRAFYTYSRANDVEGIAFTAPAEAWATQNS HHCCCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCEEEECCHHHHHCCCC GSIFGVQLNRRW CCEEEEEECCCC >Mature Secondary Structure MLSRLPVASCRCFPRRRLSAAVLAAWGMVACAQTQQGAQSLSITPPRIQDARPAPAVLAM CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCEEEEE ATPQDDPLGALIAGETPPAAAAPQTAPAPAPAEASAGAQVAGAQVAQAAAPVDDTFVGPP ECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC DSAAPPAPPTPPLVLFPSRLGHFVAEPPAEPIADAASAEETPSDAPPVLRSQLPADDAAV CCCCCCCCCCCCEEECHHHHCHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHCCCCCHHHH DSVWRLSYSGRAAAEDRDATMRACAGGALSTGIGHGLACRSSGEVRIRESVLNLDGGAQV HHHHEECCCCCCCCCCHHHHHHHHCCCHHHHCCCCCEEECCCCCEEEEEHHHCCCCCCEE MLIAQARGTDATSVNGRPAAVDPYALVPQFYTAVSGLSVLDGATMWAGRRDSSPFLMSSG EEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCCHHCCCCCCCCCEEEECC LLPPNSTAMRFGVDNARMIGDVGLSYQYTARNEQNGQNQPSYHSVRTAPITTNEQGSVQL CCCCCCCEEEECCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCEEE GFTRVEAQSLVADSGSAWWASALHEQKGVLAGTNRVGLQFGSGARSAMAGYTGMGPALSR EEEEEHHHHHHHCCCCHHHHHHHHHHCCEEECCCCEEEEECCCCHHHHCCCCCCCHHHHH VRVAESLEWKGRSGLGGSVESSMQFDRSPIGTLQWAATRIRPAYVASDQFKMVFEVARDQ HHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHCCEEEECCCHHHHHHHHHHHH ISSGFGASGQRTALTIAPTLTLGKSAGNANLRAFYTYSRANDVEGIAFTAPAEAWATQNS HHCCCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCEEEECCHHHHHCCCC GSIFGVQLNRRW CCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA