| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is yfgD [H]
Identifier: 73542954
GI number: 73542954
Start: 3579832
End: 3580191
Strand: Reverse
Name: yfgD [H]
Synonym: Reut_A3271
Alternate gene names: 73542954
Gene position: 3580191-3579832 (Counterclockwise)
Preceding gene: 73542956
Following gene: 73542950
Centisome position: 94.05
GC content: 64.44
Gene sequence:
>360_bases ATGATCACCATCTATCACAACCCTCGCTGCTCGAAATCGCGCGAAACGCTGGCCCTGGTCGAGGCCGCCGCCGAACGCCT CGGCGAACCGGTGGAGGTCGTGGAGTATCTGAAGTCGCCGCCTTCGCTGTCGACGCTGCGGCAGCTGCAGACCATGCTCG GGGTGTCGGCGCGGGAAATGATGCGGGACAACGAACCGCCGTATCAGGAGCTGGATCTGGCTGATCCAGGGCTCACGGAT GCCGAATTGCTGGCGGCCGTCGCCGACAATCCAATCTTGCTGCAACGGCCGGTAGTGGTCAGGAACCGGCGGGCCGCGAT CGGGAGGCCCCCGGAGAAGGTGGTCAGTTTGTTGGGGTGA
Upstream 100 bases:
>100_bases GAGCCATTCAGCACAATGCATGCCGGCATCGGGCAGCAGGCTTGCACAGCGCTGGTGCACGTATATAGTGCGTGATTATT CGACAAGAAGGACACCTGCC
Downstream 100 bases:
>100_bases TTTGGGGGCTCGGGGTGCTTGAAGACGTTGTTGTTCCTGGCGCACGCCCGGAACGACAACGCATAAAAATCAAAACCGGC CTCCACCCGAGGCAGAGGCC
Product: arsenate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MITIYHNPRCSKSRETLALVEAAAERLGEPVEVVEYLKSPPSLSTLRQLQTMLGVSAREMMRDNEPPYQELDLADPGLTD AELLAAVADNPILLQRPVVVRNRRAAIGRPPEKVVSLLG
Sequences:
>Translated_119_residues MITIYHNPRCSKSRETLALVEAAAERLGEPVEVVEYLKSPPSLSTLRQLQTMLGVSAREMMRDNEPPYQELDLADPGLTD AELLAAVADNPILLQRPVVVRNRRAAIGRPPEKVVSLLG >Mature_119_residues MITIYHNPRCSKSRETLALVEAAAERLGEPVEVVEYLKSPPSLSTLRQLQTMLGVSAREMMRDNEPPYQELDLADPGLTD AELLAAVADNPILLQRPVVVRNRRAAIGRPPEKVVSLLG
Specific function: Unknown
COG id: COG1393
COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArsC family [H]
Homologues:
Organism=Escherichia coli, GI1788841, Length=119, Percent_Identity=53.781512605042, Blast_Score=118, Evalue=1e-28, Organism=Escherichia coli, GI1789918, Length=117, Percent_Identity=39.3162393162393, Blast_Score=86, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006659 - InterPro: IPR006660 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF03960 ArsC [H]
EC number: NA
Molecular weight: Translated: 13128; Mature: 13128
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITIYHNPRCSKSRETLALVEAAAERLGEPVEVVEYLKSPPSLSTLRQLQTMLGVSAREM CEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHH MRDNEPPYQELDLADPGLTDAELLAAVADNPILLQRPVVVRNRRAAIGRPPEKVVSLLG HCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCHHHCCCCCCCCCCHHHHHHHHC >Mature Secondary Structure MITIYHNPRCSKSRETLALVEAAAERLGEPVEVVEYLKSPPSLSTLRQLQTMLGVSAREM CEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHH MRDNEPPYQELDLADPGLTDAELLAAVADNPILLQRPVVVRNRRAAIGRPPEKVVSLLG HCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCHHHCCCCCCCCCCHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 10493123 [H]