Definition Ralstonia eutropha JMP134 chromosome 1, complete sequence.
Accession NC_007347
Length 3,806,533

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The map label for this gene is yfgD [H]

Identifier: 73542954

GI number: 73542954

Start: 3579832

End: 3580191

Strand: Reverse

Name: yfgD [H]

Synonym: Reut_A3271

Alternate gene names: 73542954

Gene position: 3580191-3579832 (Counterclockwise)

Preceding gene: 73542956

Following gene: 73542950

Centisome position: 94.05

GC content: 64.44

Gene sequence:

>360_bases
ATGATCACCATCTATCACAACCCTCGCTGCTCGAAATCGCGCGAAACGCTGGCCCTGGTCGAGGCCGCCGCCGAACGCCT
CGGCGAACCGGTGGAGGTCGTGGAGTATCTGAAGTCGCCGCCTTCGCTGTCGACGCTGCGGCAGCTGCAGACCATGCTCG
GGGTGTCGGCGCGGGAAATGATGCGGGACAACGAACCGCCGTATCAGGAGCTGGATCTGGCTGATCCAGGGCTCACGGAT
GCCGAATTGCTGGCGGCCGTCGCCGACAATCCAATCTTGCTGCAACGGCCGGTAGTGGTCAGGAACCGGCGGGCCGCGAT
CGGGAGGCCCCCGGAGAAGGTGGTCAGTTTGTTGGGGTGA

Upstream 100 bases:

>100_bases
GAGCCATTCAGCACAATGCATGCCGGCATCGGGCAGCAGGCTTGCACAGCGCTGGTGCACGTATATAGTGCGTGATTATT
CGACAAGAAGGACACCTGCC

Downstream 100 bases:

>100_bases
TTTGGGGGCTCGGGGTGCTTGAAGACGTTGTTGTTCCTGGCGCACGCCCGGAACGACAACGCATAAAAATCAAAACCGGC
CTCCACCCGAGGCAGAGGCC

Product: arsenate reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MITIYHNPRCSKSRETLALVEAAAERLGEPVEVVEYLKSPPSLSTLRQLQTMLGVSAREMMRDNEPPYQELDLADPGLTD
AELLAAVADNPILLQRPVVVRNRRAAIGRPPEKVVSLLG

Sequences:

>Translated_119_residues
MITIYHNPRCSKSRETLALVEAAAERLGEPVEVVEYLKSPPSLSTLRQLQTMLGVSAREMMRDNEPPYQELDLADPGLTD
AELLAAVADNPILLQRPVVVRNRRAAIGRPPEKVVSLLG
>Mature_119_residues
MITIYHNPRCSKSRETLALVEAAAERLGEPVEVVEYLKSPPSLSTLRQLQTMLGVSAREMMRDNEPPYQELDLADPGLTD
AELLAAVADNPILLQRPVVVRNRRAAIGRPPEKVVSLLG

Specific function: Unknown

COG id: COG1393

COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ArsC family [H]

Homologues:

Organism=Escherichia coli, GI1788841, Length=119, Percent_Identity=53.781512605042, Blast_Score=118, Evalue=1e-28,
Organism=Escherichia coli, GI1789918, Length=117, Percent_Identity=39.3162393162393, Blast_Score=86, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006659
- InterPro:   IPR006660
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF03960 ArsC [H]

EC number: NA

Molecular weight: Translated: 13128; Mature: 13128

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITIYHNPRCSKSRETLALVEAAAERLGEPVEVVEYLKSPPSLSTLRQLQTMLGVSAREM
CEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHH
MRDNEPPYQELDLADPGLTDAELLAAVADNPILLQRPVVVRNRRAAIGRPPEKVVSLLG
HCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCHHHCCCCCCCCCCHHHHHHHHC
>Mature Secondary Structure
MITIYHNPRCSKSRETLALVEAAAERLGEPVEVVEYLKSPPSLSTLRQLQTMLGVSAREM
CEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHH
MRDNEPPYQELDLADPGLTDAELLAAVADNPILLQRPVVVRNRRAAIGRPPEKVVSLLG
HCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCHHHCCCCCCCCCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 10493123 [H]