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The map label for this gene is rpe [H]

Identifier: 73542705

GI number: 73542705

Start: 3323294

End: 3323995

Strand: Direct

Name: rpe [H]

Synonym: Reut_A3021

Alternate gene names: 73542705

Gene position: 3323294-3323995 (Clockwise)

Preceding gene: 73542703

Following gene: 73542706

Centisome position: 87.31

GC content: 67.38

Gene sequence:

>702_bases
ATGAGCACGCCCACCTACCGCATCGCCCCGTCCATCCTCTCCGCCGATTTCGCCCGCCTGGGCGAGGAAGTCCGCCGCGT
GACCGAGGCTGGCGCCGACTGGATCCACTTCGACGTGATGGACAACCACTACGTGCCGAACCTGACGGTGGGTCCGCTGG
TCTGCGAGGCGATCCGGCCGCACGTGACCGCGCCGATCGACGTGCACCTGATGGTGCGCCCGGTGGATCGCATCATCCCG
GACTTCGCCAAGGCGGGTGCCAATATCATCACCTTCCACCCGGAAGCCAGCGAACACGTGGACCGCTCGCTTGCGCTGAT
CCGCGACAACGGCTGCCAGGCCGGCCTGGTGTTCAATCCGGCCACGCCGCTGCACCACCTGGACCACGTGATGGATCGCC
TCGACGTGATCCTGCTGATGTCGGTGAACCCGGGCTTCGGCGGCCAGTCGTTCATCCCGGAAACGCTGAACAAGCTGCGC
GCGGTGCGCCAGCGCATCGACGCCTACACCGAGCGCACGGGCCGCAAGATCCTTCTCGAAGTGGACGGTGGCGTGAAGGT
CGACAACATCGCCGAGATCGCGGCGGCGGGCGCCGACACATTTGTGGCGGGCTCGGCCGTGTTCGGCAAGCCCGATGCGG
ACGGCGGCTACCGCGGCATCATTTCCGCACTGCGCGGCGAGCTGGCCAAGGTCGGCCAGTGA

Upstream 100 bases:

>100_bases
CGATTCGCCGGCCGGCCAACCCGGATCGCCCCGCAAGGGGCAGGATTCCCGCCGTGCCGCCGCCGCCCAGTCTCCAATTG
TCCCCATTCCGCCCGCCGCC

Downstream 100 bases:

>100_bases
GCGCCGGCATGACGCTGCGCCGCACCGACTGGCGCGGCATCGAAGGCGTGATCGTCGATCTGGACGGCACCATGGTCGAC
ACCGCCGGGGATTTCCACGC

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MSTPTYRIAPSILSADFARLGEEVRRVTEAGADWIHFDVMDNHYVPNLTVGPLVCEAIRPHVTAPIDVHLMVRPVDRIIP
DFAKAGANIITFHPEASEHVDRSLALIRDNGCQAGLVFNPATPLHHLDHVMDRLDVILLMSVNPGFGGQSFIPETLNKLR
AVRQRIDAYTERTGRKILLEVDGGVKVDNIAEIAAAGADTFVAGSAVFGKPDADGGYRGIISALRGELAKVGQ

Sequences:

>Translated_233_residues
MSTPTYRIAPSILSADFARLGEEVRRVTEAGADWIHFDVMDNHYVPNLTVGPLVCEAIRPHVTAPIDVHLMVRPVDRIIP
DFAKAGANIITFHPEASEHVDRSLALIRDNGCQAGLVFNPATPLHHLDHVMDRLDVILLMSVNPGFGGQSFIPETLNKLR
AVRQRIDAYTERTGRKILLEVDGGVKVDNIAEIAAAGADTFVAGSAVFGKPDADGGYRGIISALRGELAKVGQ
>Mature_232_residues
STPTYRIAPSILSADFARLGEEVRRVTEAGADWIHFDVMDNHYVPNLTVGPLVCEAIRPHVTAPIDVHLMVRPVDRIIPD
FAKAGANIITFHPEASEHVDRSLALIRDNGCQAGLVFNPATPLHHLDHVMDRLDVILLMSVNPGFGGQSFIPETLNKLRA
VRQRIDAYTERTGRKILLEVDGGVKVDNIAEIAAAGADTFVAGSAVFGKPDADGGYRGIISALRGELAKVGQ

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=229, Percent_Identity=37.5545851528384, Blast_Score=156, Evalue=1e-38,
Organism=Homo sapiens, GI219879828, Length=229, Percent_Identity=35.3711790393013, Blast_Score=144, Evalue=5e-35,
Organism=Homo sapiens, GI24307923, Length=184, Percent_Identity=32.0652173913043, Blast_Score=92, Evalue=5e-19,
Organism=Escherichia coli, GI1789788, Length=229, Percent_Identity=71.6157205240175, Blast_Score=333, Evalue=6e-93,
Organism=Escherichia coli, GI1790523, Length=202, Percent_Identity=38.6138613861386, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1790754, Length=215, Percent_Identity=28.8372093023256, Blast_Score=88, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17552948, Length=228, Percent_Identity=38.5964912280702, Blast_Score=154, Evalue=3e-38,
Organism=Saccharomyces cerevisiae, GI6322341, Length=236, Percent_Identity=37.2881355932203, Blast_Score=155, Evalue=7e-39,
Organism=Drosophila melanogaster, GI24586301, Length=207, Percent_Identity=37.6811594202899, Blast_Score=144, Evalue=7e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 25232; Mature: 25101

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPTYRIAPSILSADFARLGEEVRRVTEAGADWIHFDVMDNHYVPNLTVGPLVCEAIRP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCC
HVTAPIDVHLMVRPVDRIIPDFAKAGANIITFHPEASEHVDRSLALIRDNGCQAGLVFNP
CCCCCEEEEEEECCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHEEECCCCCCCEEECC
ATPLHHLDHVMDRLDVILLMSVNPGFGGQSFIPETLNKLRAVRQRIDAYTERTGRKILLE
CCHHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE
VDGGVKVDNIAEIAAAGADTFVAGSAVFGKPDADGGYRGIISALRGELAKVGQ
ECCCCCHHHHHHHHHCCCCHHEECCEEECCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STPTYRIAPSILSADFARLGEEVRRVTEAGADWIHFDVMDNHYVPNLTVGPLVCEAIRP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCC
HVTAPIDVHLMVRPVDRIIPDFAKAGANIITFHPEASEHVDRSLALIRDNGCQAGLVFNP
CCCCCEEEEEEECCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHEEECCCCCCCEEECC
ATPLHHLDHVMDRLDVILLMSVNPGFGGQSFIPETLNKLRAVRQRIDAYTERTGRKILLE
CCHHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE
VDGGVKVDNIAEIAAAGADTFVAGSAVFGKPDADGGYRGIISALRGELAKVGQ
ECCCCCHHHHHHHHHCCCCHHEECCEEECCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]