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The map label for this gene is ybdA [C]

Identifier: 73542569

GI number: 73542569

Start: 3159739

End: 3161370

Strand: Direct

Name: ybdA [C]

Synonym: Reut_A2884

Alternate gene names: 73542569

Gene position: 3159739-3161370 (Clockwise)

Preceding gene: 73542568

Following gene: 73542581

Centisome position: 83.01

GC content: 68.5

Gene sequence:

>1632_bases
GTGGACAACTCCAAGGCTTCGCCTTCTGGCGCCCCATCACGCACCGGCGCCCCGGCTGCGGGCCCCTTCTCCTATCCTGC
GTTCACGGTGCTGTGGATCGCCACGGTGCTCTCGAATATCGGCACCTGGATGCATGACGTCGGCGCCGGCTGGCTCATGA
CGTCGCTCGCGCCGTCGCCGGCGTGGGTGGCACTGGTGCAGACCGCGACGTCGCTGCCGGTGTTCCTGCTGGCGCTGCCA
GCAGGGGCGCTGGCCGATATCCTCGACCGGCGCAAGATGTTGCTGGCGGTGCAGATCGTGATGGCCCTGGTCGCTGCGGG
CCTCGGTGTGGTGGTGTTGCTGGGTGCGGCCACCCCCGTGCTGCTGTTGCTGTTCACGTTCGCAATGGGCGTGGGAGCCG
CCATCACGGCGCCGGCCTGGCAGGCCATCGTGCCGAGCCTTGTCCCGCGCCAGGCGCTGCAGCAGGCGGTGGCCACCAAC
AGCGTGGGTATCAATATCAGCCGCGCCATCGGCCCCGCCCTGGCGGGCTTCATCATTTCCGGCATCGGCGTGGCTGCGCC
CTTCCTGATCAATGCCGTCAGTTTCCTGGCTGTGGTGGCCGCACTCGCGTGGTGGCGCCCGCCTGCACCGGCAGAGCGCC
GGCTGCCCACCGAAGACCTGCTCGGCGCCATGCGCGCCGGCGTGCGCTTCGCATGGCATAGCCAGGCGCTCAAGGCCACG
CTCGCGCGCGCGGCAGCCTTCTTTCTGTTCGCGAGCGCCTACTGGGCCATGCTGCCGTTGATCGTGCGACAGGTGCTGGC
CGGGGGCGCCCAGCTCTACGGCGTGCTGCTTGGCTGCGTGGGCGTTGGCGCGGTGCTGGGCGCGCTAGGATTGGGCCGGC
TGCGCCAGCGGCTCGGCCCCGACAGCGTGGTGGCGCTGGGCACCATGGGTACTGTGGTAGCGCTGTTGCTCTTTGCCACG
ATCCACAACCCCGTGGCAGCCGGTGTGGCGAGCCTCGTAGCAGGCGCCTCATGGATTGCCGTGCTGACCACGCTCAACGT
GTCCGCGCAGACATCGCTGCCGGAATGGGTGCGCGCACGCGGCCTGTCGATCTTCGTCACCGTGTTTTTCGGCTCGATGA
GCGCAGGCAGCATCGTCTGGGGCCAGACCGCAACGCACTTCGGCATCTCCGCCGCGCTGCTGATCGCGAGCGCCGGCGCG
GTGCTGGCCATCGCGCTGACGTGGCGCTACAAGCTGCAGCAGGGCGATTCTTCGCAACTGGCCCCGTCCATGCATTGGCC
AGCGCCGACGGTCAGCGATGAAGTCGCGCACGACCGCGGCCCGGTGCTGATCACGATCGAATATCAGGTACGGCCCGAAA
ACGCGGCACGCTTTGTCGCCACGCTGGACGAACTGAGTCAGGCCCGCCTGCGTGACGGTGCTTTTTCATGGGGCTTGTTC
GAAGATGCCGCGCAGCCGGGGCGCTACGTCGAATGCTTCCAGGTCGTGTCGTGGCTGGAGCACCTGCGCCAGCATGAGCG
CGTGACGCTCCATGACCGCGATGTGCAGGAACGCGCGCTGGCATTCCACAGCGGCGCGCAACCGCCAGTGGTATCGCACT
TCATCGCGCCGCAGACACCGCCGGCCGCGTGA

Upstream 100 bases:

>100_bases
GCCTGCCCCACCGATCTGAAAACTTTCGACGGCCGCTCCACGCGGCCGTTTTTATGTTTAGCCTTGAAGTTGCCCCACAC
GCCCTTTTCCGGAGCTACAC

Downstream 100 bases:

>100_bases
TGCTGAAGCGATCCCTCAGTCGATCCAGTTGACCTTGGGGAAGCGGTCCGCAAAGCCGGCCGGCATCGCCTTCACTTTCT
TCTCCTGGTAGTCGAAGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Efflux Protein; Facilitator Superfamily Protein; MFS Permease; MFS Family Transporter; Facilitator Superfamily Permease; Transmembrane Efflux Protein; MFS Transporter; Facilitator Superfamily Transporter; Multidrug ABC Transporter; Permeases Of Facilitator Superfamily; Facilitator Superfamily; Arabinose Efflux Permease Family Protein; Permease Of Facilitator Superfamily; Transport Transmembrane Protein; MFS Family Transporter Protein; Permease; Mfs Transporter; Transporter Facilitator Family; Facilitator Superfamily Transmembrane Transporter; ABC Transporter Permease Protein; Transporter-Like Membrane Protein; Facilitator Transpoter; MFS Family Membrane Efflux Protein; Macrolide-Efflux Protein; Facilitator Superfamily Multidrug Efflux Transporter; Dioxygenase; MFS Family Diterpenoid Transporter; MFS Superfamily Transporter

Number of amino acids: Translated: 543; Mature: 543

Protein sequence:

>543_residues
MDNSKASPSGAPSRTGAPAAGPFSYPAFTVLWIATVLSNIGTWMHDVGAGWLMTSLAPSPAWVALVQTATSLPVFLLALP
AGALADILDRRKMLLAVQIVMALVAAGLGVVVLLGAATPVLLLLFTFAMGVGAAITAPAWQAIVPSLVPRQALQQAVATN
SVGINISRAIGPALAGFIISGIGVAAPFLINAVSFLAVVAALAWWRPPAPAERRLPTEDLLGAMRAGVRFAWHSQALKAT
LARAAAFFLFASAYWAMLPLIVRQVLAGGAQLYGVLLGCVGVGAVLGALGLGRLRQRLGPDSVVALGTMGTVVALLLFAT
IHNPVAAGVASLVAGASWIAVLTTLNVSAQTSLPEWVRARGLSIFVTVFFGSMSAGSIVWGQTATHFGISAALLIASAGA
VLAIALTWRYKLQQGDSSQLAPSMHWPAPTVSDEVAHDRGPVLITIEYQVRPENAARFVATLDELSQARLRDGAFSWGLF
EDAAQPGRYVECFQVVSWLEHLRQHERVTLHDRDVQERALAFHSGAQPPVVSHFIAPQTPPAA

Sequences:

>Translated_543_residues
MDNSKASPSGAPSRTGAPAAGPFSYPAFTVLWIATVLSNIGTWMHDVGAGWLMTSLAPSPAWVALVQTATSLPVFLLALP
AGALADILDRRKMLLAVQIVMALVAAGLGVVVLLGAATPVLLLLFTFAMGVGAAITAPAWQAIVPSLVPRQALQQAVATN
SVGINISRAIGPALAGFIISGIGVAAPFLINAVSFLAVVAALAWWRPPAPAERRLPTEDLLGAMRAGVRFAWHSQALKAT
LARAAAFFLFASAYWAMLPLIVRQVLAGGAQLYGVLLGCVGVGAVLGALGLGRLRQRLGPDSVVALGTMGTVVALLLFAT
IHNPVAAGVASLVAGASWIAVLTTLNVSAQTSLPEWVRARGLSIFVTVFFGSMSAGSIVWGQTATHFGISAALLIASAGA
VLAIALTWRYKLQQGDSSQLAPSMHWPAPTVSDEVAHDRGPVLITIEYQVRPENAARFVATLDELSQARLRDGAFSWGLF
EDAAQPGRYVECFQVVSWLEHLRQHERVTLHDRDVQERALAFHSGAQPPVVSHFIAPQTPPAA
>Mature_543_residues
MDNSKASPSGAPSRTGAPAAGPFSYPAFTVLWIATVLSNIGTWMHDVGAGWLMTSLAPSPAWVALVQTATSLPVFLLALP
AGALADILDRRKMLLAVQIVMALVAAGLGVVVLLGAATPVLLLLFTFAMGVGAAITAPAWQAIVPSLVPRQALQQAVATN
SVGINISRAIGPALAGFIISGIGVAAPFLINAVSFLAVVAALAWWRPPAPAERRLPTEDLLGAMRAGVRFAWHSQALKAT
LARAAAFFLFASAYWAMLPLIVRQVLAGGAQLYGVLLGCVGVGAVLGALGLGRLRQRLGPDSVVALGTMGTVVALLLFAT
IHNPVAAGVASLVAGASWIAVLTTLNVSAQTSLPEWVRARGLSIFVTVFFGSMSAGSIVWGQTATHFGISAALLIASAGA
VLAIALTWRYKLQQGDSSQLAPSMHWPAPTVSDEVAHDRGPVLITIEYQVRPENAARFVATLDELSQARLRDGAFSWGLF
EDAAQPGRYVECFQVVSWLEHLRQHERVTLHDRDVQERALAFHSGAQPPVVSHFIAPQTPPAA

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56877; Mature: 56877

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNSKASPSGAPSRTGAPAAGPFSYPAFTVLWIATVLSNIGTWMHDVGAGWLMTSLAPSP
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCH
AWVALVQTATSLPVFLLALPAGALADILDRRKMLLAVQIVMALVAAGLGVVVLLGAATPV
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLLFTFAMGVGAAITAPAWQAIVPSLVPRQALQQAVATNSVGINISRAIGPALAGFIIS
HHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHH
GIGVAAPFLINAVSFLAVVAALAWWRPPAPAERRLPTEDLLGAMRAGVRFAWHSQALKAT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHCCHHHHHHHHHHHH
LARAAAFFLFASAYWAMLPLIVRQVLAGGAQLYGVLLGCVGVGAVLGALGLGRLRQRLGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DSVVALGTMGTVVALLLFATIHNPVAAGVASLVAGASWIAVLTTLNVSAQTSLPEWVRAR
CCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHC
GLSIFVTVFFGSMSAGSIVWGQTATHFGISAALLIASAGAVLAIALTWRYKLQQGDSSQL
CCCEEEEEHHCCCCCCCEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
APSMHWPAPTVSDEVAHDRGPVLITIEYQVRPENAARFVATLDELSQARLRDGAFSWGLF
CCCCCCCCCCCCHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCH
EDAAQPGRYVECFQVVSWLEHLRQHERVTLHDRDVQERALAFHSGAQPPVVSHFIAPQTP
HHHCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHCCCCCCHHHHHCCCCCC
PAA
CCC
>Mature Secondary Structure
MDNSKASPSGAPSRTGAPAAGPFSYPAFTVLWIATVLSNIGTWMHDVGAGWLMTSLAPSP
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCH
AWVALVQTATSLPVFLLALPAGALADILDRRKMLLAVQIVMALVAAGLGVVVLLGAATPV
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLLFTFAMGVGAAITAPAWQAIVPSLVPRQALQQAVATNSVGINISRAIGPALAGFIIS
HHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHH
GIGVAAPFLINAVSFLAVVAALAWWRPPAPAERRLPTEDLLGAMRAGVRFAWHSQALKAT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHCCHHHHHHHHHHHH
LARAAAFFLFASAYWAMLPLIVRQVLAGGAQLYGVLLGCVGVGAVLGALGLGRLRQRLGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DSVVALGTMGTVVALLLFATIHNPVAAGVASLVAGASWIAVLTTLNVSAQTSLPEWVRAR
CCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHC
GLSIFVTVFFGSMSAGSIVWGQTATHFGISAALLIASAGAVLAIALTWRYKLQQGDSSQL
CCCEEEEEHHCCCCCCCEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
APSMHWPAPTVSDEVAHDRGPVLITIEYQVRPENAARFVATLDELSQARLRDGAFSWGLF
CCCCCCCCCCCCHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCH
EDAAQPGRYVECFQVVSWLEHLRQHERVTLHDRDVQERALAFHSGAQPPVVSHFIAPQTP
HHHCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHCCCCCCHHHHHCCCCCC
PAA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA