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The map label for this gene is rdgC [H]

Identifier: 73542568

GI number: 73542568

Start: 3158734

End: 3159633

Strand: Direct

Name: rdgC [H]

Synonym: Reut_A2883

Alternate gene names: 73542568

Gene position: 3158734-3159633 (Clockwise)

Preceding gene: 73542567

Following gene: 73542569

Centisome position: 82.98

GC content: 65.56

Gene sequence:

>900_bases
ATGTGGTTCAAGAACCTGCAGCTCCACCGTTTTTCCGCTCCATGGTCGCCCAGCGCCGACGAAGTCGAAGCCAGCCTGGC
CAAACATGCCTTCTTCCCCGGCACCAGCCTTGAAATGCAGACGCAGGGCTGGGCTTCGCCACGCGACAACGGCCAGCTGG
TGCACGCCGTGGGCCGCCAGATGTTGCTGACGCTGCGCACCGAAAAGAAGCTGCTGCCCGCCACCGTGGTCAACCAGGTC
ACCAAGGCACGCGCGGCCGAGGTCGAGGAGCAGCAAGGCTACAAGCCGGGCCGCAAGCAGCTGCGCGAACTGAAGGAGCA
GGTCACCGAAGAACTGCTGCCACGCGCGTTCAGCATCCGCCGCGACACGCGCGTGTGGATCGACCCGGACAATGGCTGGC
TCGCCATCGACGCCGCCAGCACAGCCAAGGCCGACGAAGTACGCGGCATGCTGTTCAAGGCACTGGACGCGCTGCCGCTC
GCGAATCTGCACGTGAACCAGTCGCCCGTCGCTGCGATGACGGACTGGCTGTCGACCGACGTCGCTCCCGCCGGCTTCAC
CGTCGACCAGGAAATCGAGCTGCAGTCGGGCAGCGAGAGCAAGGCCACCGTCCGCTACGTCCGCCATCCGCTCGACGCCG
AAGACCTGCGCCGCCATATTTCCGGCGGCAAGCGCTGCACGCGCCTGGCCATGACCTGGAACGACCGCGTGTCGTTCGTG
CTGACCGATTCGCTGGCGATCAAGCGCGTAGCACCGCTCGATGTGATCAAAGAACAGGCCGACGGCACGGTCAGCGACGA
AGACGAGCGTTTCGACGCGGATTTCACGCTGATGGCCGGAGAACTGGCCGGCATGCTCGGCGACCTGACCGAAGCGCTTG
GCGGAGAACGCAAGGCCTGA

Upstream 100 bases:

>100_bases
CCTGTAGCACCAACCACATCAACGGGCCGCCGTGTCGACCGCTTTTTCCGGCGGCGCGGCGCGACCGGATAGAATTCGTC
CCTTTGGCCGAATTCCTCCC

Downstream 100 bases:

>100_bases
GGCCTGCCTGCCCCACCGATCTGAAAACTTTCGACGGCCGCTCCACGCGGCCGTTTTTATGTTTAGCCTTGAAGTTGCCC
CACACGCCCTTTTCCGGAGC

Product: recombination associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MWFKNLQLHRFSAPWSPSADEVEASLAKHAFFPGTSLEMQTQGWASPRDNGQLVHAVGRQMLLTLRTEKKLLPATVVNQV
TKARAAEVEEQQGYKPGRKQLRELKEQVTEELLPRAFSIRRDTRVWIDPDNGWLAIDAASTAKADEVRGMLFKALDALPL
ANLHVNQSPVAAMTDWLSTDVAPAGFTVDQEIELQSGSESKATVRYVRHPLDAEDLRRHISGGKRCTRLAMTWNDRVSFV
LTDSLAIKRVAPLDVIKEQADGTVSDEDERFDADFTLMAGELAGMLGDLTEALGGERKA

Sequences:

>Translated_299_residues
MWFKNLQLHRFSAPWSPSADEVEASLAKHAFFPGTSLEMQTQGWASPRDNGQLVHAVGRQMLLTLRTEKKLLPATVVNQV
TKARAAEVEEQQGYKPGRKQLRELKEQVTEELLPRAFSIRRDTRVWIDPDNGWLAIDAASTAKADEVRGMLFKALDALPL
ANLHVNQSPVAAMTDWLSTDVAPAGFTVDQEIELQSGSESKATVRYVRHPLDAEDLRRHISGGKRCTRLAMTWNDRVSFV
LTDSLAIKRVAPLDVIKEQADGTVSDEDERFDADFTLMAGELAGMLGDLTEALGGERKA
>Mature_299_residues
MWFKNLQLHRFSAPWSPSADEVEASLAKHAFFPGTSLEMQTQGWASPRDNGQLVHAVGRQMLLTLRTEKKLLPATVVNQV
TKARAAEVEEQQGYKPGRKQLRELKEQVTEELLPRAFSIRRDTRVWIDPDNGWLAIDAASTAKADEVRGMLFKALDALPL
ANLHVNQSPVAAMTDWLSTDVAPAGFTVDQEIELQSGSESKATVRYVRHPLDAEDLRRHISGGKRCTRLAMTWNDRVSFV
LTDSLAIKRVAPLDVIKEQADGTVSDEDERFDADFTLMAGELAGMLGDLTEALGGERKA

Specific function: May be involved in recombination [H]

COG id: COG2974

COG function: function code L; DNA recombination-dependent growth factor C

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdgC family [H]

Homologues:

Organism=Escherichia coli, GI1786592, Length=299, Percent_Identity=37.4581939799331, Blast_Score=205, Evalue=3e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007476 [H]

Pfam domain/function: PF04381 RdgC [H]

EC number: NA

Molecular weight: Translated: 33206; Mature: 33206

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWFKNLQLHRFSAPWSPSADEVEASLAKHAFFPGTSLEMQTQGWASPRDNGQLVHAVGRQ
CCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHH
MLLTLRTEKKLLPATVVNQVTKARAAEVEEQQGYKPGRKQLRELKEQVTEELLPRAFSIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
RDTRVWIDPDNGWLAIDAASTAKADEVRGMLFKALDALPLANLHVNQSPVAAMTDWLSTD
CCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHC
VAPAGFTVDQEIELQSGSESKATVRYVRHPLDAEDLRRHISGGKRCTRLAMTWNDRVSFV
CCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCHHHHHHHHCCCCHHEEEEEEECCCEEEE
LTDSLAIKRVAPLDVIKEQADGTVSDEDERFDADFTLMAGELAGMLGDLTEALGGERKA
EECCHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MWFKNLQLHRFSAPWSPSADEVEASLAKHAFFPGTSLEMQTQGWASPRDNGQLVHAVGRQ
CCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHH
MLLTLRTEKKLLPATVVNQVTKARAAEVEEQQGYKPGRKQLRELKEQVTEELLPRAFSIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
RDTRVWIDPDNGWLAIDAASTAKADEVRGMLFKALDALPLANLHVNQSPVAAMTDWLSTD
CCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHC
VAPAGFTVDQEIELQSGSESKATVRYVRHPLDAEDLRRHISGGKRCTRLAMTWNDRVSFV
CCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCHHHHHHHHCCCCHHEEEEEEECCCEEEE
LTDSLAIKRVAPLDVIKEQADGTVSDEDERFDADFTLMAGELAGMLGDLTEALGGERKA
EECCHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA