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The map label for this gene is ybiX [C]

Identifier: 73542562

GI number: 73542562

Start: 3152051

End: 3152737

Strand: Direct

Name: ybiX [C]

Synonym: Reut_A2877

Alternate gene names: 73542562

Gene position: 3152051-3152737 (Clockwise)

Preceding gene: 73542561

Following gene: 73542565

Centisome position: 82.81

GC content: 65.65

Gene sequence:

>687_bases
ATGCTGGTCGTCATCCCCCAGGTCCTCAACGCCGAACAGGTCGGCGCCGTACGCGAACGGCTCGAACATGCGGGCGAGGC
CTGGGTCGATGGCCGGGTCACGGCTGGCTACTCGGGCGCGCCGGTCAAGTTCAACCAGCAGATCGACGAACGCTCCGACG
TGGCGCTCGAGTGCCAGCGGCTGATTCTTGGCATGCTCGAGCGCAACCCGCGATTCATCAGCGCTGCGCTGCCGAATATC
GTCTACCCGCCGATGTTCAACCGCTACAGCGAGGGCATGACGTTCGGCGCCCATGTGGACGGCAGCGTACGCATCCATCC
GCATGACGGGCGCAAGCTGCGCACCGACATCTCCGCCACGCTGTTCCTGTCGCCACACGACAGTTACGACGGCGGCGAGC
TGCAGGTGCAGGACACCTACGGCATGCACTCGGTCAAGCTCGACGCCGGCGACATGGTCGTCTACCCCGCCACCAGCCTG
CACCAGGTCACGCCGATTACGCGCGGCACGCGCGTGGCCAGCTTCTTCTGGATCCAGAGCCTGATACGCGACGACACGCA
GCGCTCGCTGCTGTTCGACATGGACAACGCCATCCAGCGGCTGAACCAGACCGGTGCGGACGAGGAAGCGCGCCGCACGC
TGGTGGGCTGCTATCACAACCTGCTGCGGCAGTGGAGCGAGACGTAA

Upstream 100 bases:

>100_bases
TGCGCTGATCCAGTCGGACGGCGGACGCTCGGTGCCGGGCACGGGCCGCACCGCCATGCTGTCGTTTACGTATCGCATGT
AAGCAGGAAAGGAAAGCCTG

Downstream 100 bases:

>100_bases
GCCGAAAGTCTGGTCACGGAAGCGAAAAAAGGGCCGGGCGGTGAATCACCGCCCGGCCCTTTTTGCTGACCGCCGACTCG
CTTACATCCGATAGCGAATC

Product: putative hydroxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MLVVIPQVLNAEQVGAVRERLEHAGEAWVDGRVTAGYSGAPVKFNQQIDERSDVALECQRLILGMLERNPRFISAALPNI
VYPPMFNRYSEGMTFGAHVDGSVRIHPHDGRKLRTDISATLFLSPHDSYDGGELQVQDTYGMHSVKLDAGDMVVYPATSL
HQVTPITRGTRVASFFWIQSLIRDDTQRSLLFDMDNAIQRLNQTGADEEARRTLVGCYHNLLRQWSET

Sequences:

>Translated_228_residues
MLVVIPQVLNAEQVGAVRERLEHAGEAWVDGRVTAGYSGAPVKFNQQIDERSDVALECQRLILGMLERNPRFISAALPNI
VYPPMFNRYSEGMTFGAHVDGSVRIHPHDGRKLRTDISATLFLSPHDSYDGGELQVQDTYGMHSVKLDAGDMVVYPATSL
HQVTPITRGTRVASFFWIQSLIRDDTQRSLLFDMDNAIQRLNQTGADEEARRTLVGCYHNLLRQWSET
>Mature_228_residues
MLVVIPQVLNAEQVGAVRERLEHAGEAWVDGRVTAGYSGAPVKFNQQIDERSDVALECQRLILGMLERNPRFISAALPNI
VYPPMFNRYSEGMTFGAHVDGSVRIHPHDGRKLRTDISATLFLSPHDSYDGGELQVQDTYGMHSVKLDAGDMVVYPATSL
HQVTPITRGTRVASFFWIQSLIRDDTQRSLLFDMDNAIQRLNQTGADEEARRTLVGCYHNLLRQWSET

Specific function: Unknown

COG id: COG3128

COG function: function code S; Uncharacterized iron-regulated protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe2OG dioxygenase domain

Homologues:

Organism=Escherichia coli, GI87081784, Length=227, Percent_Identity=54.625550660793, Blast_Score=249, Evalue=1e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2877_CUPPJ (Q46X95)

Other databases:

- EMBL:   CP000090
- RefSeq:   YP_297082.1
- ProteinModelPortal:   Q46X95
- GeneID:   3611015
- GenomeReviews:   CP000090_GR
- KEGG:   reu:Reut_A2877
- NMPDR:   fig|264198.3.peg.2487
- HOGENOM:   HBG285605
- OMA:   GRATAGY
- ProtClustDB:   PRK05467
- BioCyc:   REUT264198:REUT_A2877-MONOMER
- HAMAP:   MF_00657
- InterPro:   IPR005123
- InterPro:   IPR006620
- SMART:   SM00702

Pfam domain/function: PF03171 2OG-FeII_Oxy

EC number: 1.14.11.- [C]

Molecular weight: Translated: 25627; Mature: 25627

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: PS51471 FE2OG_OXY

Important sites: BINDING 171-171

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVVIPQVLNAEQVGAVRERLEHAGEAWVDGRVTAGYSGAPVKFNQQIDERSDVALECQR
CEEEECCHHCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCEEECCCCCCCCCHHHHHHH
LILGMLERNPRFISAALPNIVYPPMFNRYSEGMTFGAHVDGSVRIHPHDGRKLRTDISAT
HHHHHHHCCCCEEEHHCCCCCCCCCHHHHHCCCEEEEECCCEEEECCCCCCEEEECCEEE
LFLSPHDSYDGGELQVQDTYGMHSVKLDAGDMVVYPATSLHQVTPITRGTRVASFFWIQS
EEECCCCCCCCCEEEEEECCCCEEEEECCCCEEEECCCCCHHCCCCCCCCHHHHHHHHHH
LIRDDTQRSLLFDMDNAIQRLNQTGADEEARRTLVGCYHNLLRQWSET
HHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLVVIPQVLNAEQVGAVRERLEHAGEAWVDGRVTAGYSGAPVKFNQQIDERSDVALECQR
CEEEECCHHCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCEEECCCCCCCCCHHHHHHH
LILGMLERNPRFISAALPNIVYPPMFNRYSEGMTFGAHVDGSVRIHPHDGRKLRTDISAT
HHHHHHHCCCCEEEHHCCCCCCCCCHHHHHCCCEEEEECCCEEEECCCCCCEEEECCEEE
LFLSPHDSYDGGELQVQDTYGMHSVKLDAGDMVVYPATSLHQVTPITRGTRVASFFWIQS
EEECCCCCCCCCEEEEEECCCCEEEEECCCCEEEECCCCCHHCCCCCCCCHHHHHHHHHH
LIRDDTQRSLLFDMDNAIQRLNQTGADEEARRTLVGCYHNLLRQWSET
HHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA