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The map label for this gene is bfrD [H]

Identifier: 73542561

GI number: 73542561

Start: 3149777

End: 3152032

Strand: Direct

Name: bfrD [H]

Synonym: Reut_A2876

Alternate gene names: 73542561

Gene position: 3149777-3152032 (Clockwise)

Preceding gene: 73542560

Following gene: 73542562

Centisome position: 82.75

GC content: 63.74

Gene sequence:

>2256_bases
ATGAACCGCCGCTTCCAACGCACCCCCCTTGCCACCGCGCTGATCGCCCTGTCCGCCGTCCCCGCTGCAACCCTCGCCCA
GCAGGCCCCGGCCACAGCTCCGACGCAACAGGCGGCAGCCGCCACAACGTTGAAGGAGGTCGTGGTCTCGGGCGCGGCAT
CGCGCGACGACTTCAACGCCGGCAAGACCTCCCTCAGCAAGCTGCCTGAAGACCTCCACGATGTGCCTCAATCGGTCACC
ATCGTGAACAAGGCGTTGATGGAGTCGCAGGGCGTGAATTCGCTCGCCGACGCGCTGCGCAATGTGCCGGGCATCACCAT
CGGGGGCGCCGAAGGCGGCCAGATCGGCAACAACATCAACCTGAACGGCTTCTCGGCGCGTACCGACATCTACCTGGACG
GCTTCCGCGACCGCGGCCAGTACTACCGCGACACGTTCGCGCTGGACCAGGTGGAAGTGCTGATGGGCCCGTCGTCGATG
TTGTTCGGCCGCGGCTCCACGGGCGGCGTGATCAACCAGGTCACCAAGAAGCCGCAGCTGAAGGCCGCCACCGAAGTGAC
GGGCTCGGTGACCACGAACGGGCTGGTGCGCGCGACCGCGGACTACAACACGCCGACGGGCGAGACCTCGGCGTTCCGCA
TCTCGGCCATGGGCCAGGACGGCCGGCCGACCACGCGCGACGAAATGACGGTGCAGGACTTCGGCATTGCGCCGTCGTGG
CGCCTGGGTATCGGCACCCCCACCGAAATCACCCTGTCGGCGCTGCTGCAGCACAACCACGACATGCCGGACTATGGCTT
CTCGAACATCAACGGCCACCCGACCAGCGTCGACCGCAATACGTTCTACGGCTTCACCGACGATCGCACCAACCAGGACA
TCGCCGCGCTGAACGCCAGCATCTCGCACAAGTTCTCGCCGAACCTGCGCCTGCGCAACCAGACGCAGTTCAACTATGTG
GAAACCGATGCGCGGGAAACCGCGCCGAACTCGGTCGGCTCGGTCAGCGCGCGAGGCTTCACGCCGCTGACCACCAGCGC
CCTGCCGCTGGACCAGCTGTTTGTGCGCCTGCAGAGCCACGACCGCAAGATCCGCGACTATTCCATCTACAACCAGACGG
AACTGACCGCTAACTTCGACACCGGCTCCATCAAGCACACGCTGCTGGTCGGCGCCGAAATTGGCCATGACGGCTACAAC
AACCAGAACTATTACCGCAACGGCAGCTGCAATGGCCAGCCGCTGGTCAGCGGCACGACCGCCGCGACCGTCGGTTACGT
TGCCTGCGAGCCGGTAGTCAACCCGACGTACACCGCCTCGCCCGCCAATGCGCCTGCCAGCACCGGAAACCTGCAAGGAG
GTTCGGCGAACACGATTGCCGCCTACCTGAACGATTCGATCGAGCTCACCAAGCAATGGAAGGCCGTGGCTGGCCTGCGC
TATGACCGCTACATCGCGAGCGTCAGCAACTCGATCAATTCGTCCAACGACGCCGGCGCACCGTATTTCAGTACCGCACT
GGCGAGCGCCGACCAGACCGTCAACTTCACCAGCGTGCGCCTCGGTGGCATCTGGCAGCCGACTGAAGCCCAGTCCTACT
ATGTGTCGTACGGCACTTCGTTCAATCCGTCGCTGGAGCAACTGGTCGGCACCGTGGGCCAGCAGAGCCTGGATCCGGAA
AAGAACAAGTCGTATGAAGTCGGCGGCAAGTGGGACGTGATGGGCGGCGACCTGTCGCTGACCTCCGCGCTGTTCCAGAT
CACCAAGGACAATGCCCGCAGCCAGATCGACGCCACGACCTATGCGTTGTCCGGCAAGATCCGGGTAAAGGGCTTCCGCG
CAGGCGCCACCGGGCATATCACCAGCAAGTGGCAGGTGTTTGCCGGCTATACGTACCTCGACGGCGAGATCATCAACGGC
ATCGCCGCGAGCACCACCGGCAAGGTACCGACAAACACGCCGAAGCACACCGCCACGGCCTGGACCAGCTATCGCTTCCT
GCCGAACTGGGAAGTCGGCGGCGGCGCTTTCTATATGTCGGAGCGCTTTGCCAACAACACCAACACGGTCCAGGTGGGCA
GCTTCGTGCGCTGGGACGGCATGATCGCCTACCATCAGCCCAAATATGATGTGCGCCTGAACCTGTTCAACATCTTCGAC
AAGATGTATTACGATGCGCTGATCCAGTCGGACGGCGGACGCTCGGTGCCGGGCACGGGCCGCACCGCCATGCTGTCGTT
TACGTATCGCATGTAA

Upstream 100 bases:

>100_bases
AATCATTGCCCCCCCTTTGACCGCATTTCCGATTGCAGTGGATTCGCGCCGGCGGCCGCGCTATATGTGCCCGTAGCGGG
GGAACAAAAACACCTGAGCC

Downstream 100 bases:

>100_bases
GCAGGAAAGGAAAGCCTGATGCTGGTCGTCATCCCCCAGGTCCTCAACGCCGAACAGGTCGGCGCCGTACGCGAACGGCT
CGAACATGCGGGCGAGGCCT

Product: TonB-dependent siderophore receptor

Products: NA

Alternate protein names: Virulence-associated outer membrane protein Vir-90 [H]

Number of amino acids: Translated: 751; Mature: 751

Protein sequence:

>751_residues
MNRRFQRTPLATALIALSAVPAATLAQQAPATAPTQQAAAATTLKEVVVSGAASRDDFNAGKTSLSKLPEDLHDVPQSVT
IVNKALMESQGVNSLADALRNVPGITIGGAEGGQIGNNINLNGFSARTDIYLDGFRDRGQYYRDTFALDQVEVLMGPSSM
LFGRGSTGGVINQVTKKPQLKAATEVTGSVTTNGLVRATADYNTPTGETSAFRISAMGQDGRPTTRDEMTVQDFGIAPSW
RLGIGTPTEITLSALLQHNHDMPDYGFSNINGHPTSVDRNTFYGFTDDRTNQDIAALNASISHKFSPNLRLRNQTQFNYV
ETDARETAPNSVGSVSARGFTPLTTSALPLDQLFVRLQSHDRKIRDYSIYNQTELTANFDTGSIKHTLLVGAEIGHDGYN
NQNYYRNGSCNGQPLVSGTTAATVGYVACEPVVNPTYTASPANAPASTGNLQGGSANTIAAYLNDSIELTKQWKAVAGLR
YDRYIASVSNSINSSNDAGAPYFSTALASADQTVNFTSVRLGGIWQPTEAQSYYVSYGTSFNPSLEQLVGTVGQQSLDPE
KNKSYEVGGKWDVMGGDLSLTSALFQITKDNARSQIDATTYALSGKIRVKGFRAGATGHITSKWQVFAGYTYLDGEIING
IAASTTGKVPTNTPKHTATAWTSYRFLPNWEVGGGAFYMSERFANNTNTVQVGSFVRWDGMIAYHQPKYDVRLNLFNIFD
KMYYDALIQSDGGRSVPGTGRTAMLSFTYRM

Sequences:

>Translated_751_residues
MNRRFQRTPLATALIALSAVPAATLAQQAPATAPTQQAAAATTLKEVVVSGAASRDDFNAGKTSLSKLPEDLHDVPQSVT
IVNKALMESQGVNSLADALRNVPGITIGGAEGGQIGNNINLNGFSARTDIYLDGFRDRGQYYRDTFALDQVEVLMGPSSM
LFGRGSTGGVINQVTKKPQLKAATEVTGSVTTNGLVRATADYNTPTGETSAFRISAMGQDGRPTTRDEMTVQDFGIAPSW
RLGIGTPTEITLSALLQHNHDMPDYGFSNINGHPTSVDRNTFYGFTDDRTNQDIAALNASISHKFSPNLRLRNQTQFNYV
ETDARETAPNSVGSVSARGFTPLTTSALPLDQLFVRLQSHDRKIRDYSIYNQTELTANFDTGSIKHTLLVGAEIGHDGYN
NQNYYRNGSCNGQPLVSGTTAATVGYVACEPVVNPTYTASPANAPASTGNLQGGSANTIAAYLNDSIELTKQWKAVAGLR
YDRYIASVSNSINSSNDAGAPYFSTALASADQTVNFTSVRLGGIWQPTEAQSYYVSYGTSFNPSLEQLVGTVGQQSLDPE
KNKSYEVGGKWDVMGGDLSLTSALFQITKDNARSQIDATTYALSGKIRVKGFRAGATGHITSKWQVFAGYTYLDGEIING
IAASTTGKVPTNTPKHTATAWTSYRFLPNWEVGGGAFYMSERFANNTNTVQVGSFVRWDGMIAYHQPKYDVRLNLFNIFD
KMYYDALIQSDGGRSVPGTGRTAMLSFTYRM
>Mature_751_residues
MNRRFQRTPLATALIALSAVPAATLAQQAPATAPTQQAAAATTLKEVVVSGAASRDDFNAGKTSLSKLPEDLHDVPQSVT
IVNKALMESQGVNSLADALRNVPGITIGGAEGGQIGNNINLNGFSARTDIYLDGFRDRGQYYRDTFALDQVEVLMGPSSM
LFGRGSTGGVINQVTKKPQLKAATEVTGSVTTNGLVRATADYNTPTGETSAFRISAMGQDGRPTTRDEMTVQDFGIAPSW
RLGIGTPTEITLSALLQHNHDMPDYGFSNINGHPTSVDRNTFYGFTDDRTNQDIAALNASISHKFSPNLRLRNQTQFNYV
ETDARETAPNSVGSVSARGFTPLTTSALPLDQLFVRLQSHDRKIRDYSIYNQTELTANFDTGSIKHTLLVGAEIGHDGYN
NQNYYRNGSCNGQPLVSGTTAATVGYVACEPVVNPTYTASPANAPASTGNLQGGSANTIAAYLNDSIELTKQWKAVAGLR
YDRYIASVSNSINSSNDAGAPYFSTALASADQTVNFTSVRLGGIWQPTEAQSYYVSYGTSFNPSLEQLVGTVGQQSLDPE
KNKSYEVGGKWDVMGGDLSLTSALFQITKDNARSQIDATTYALSGKIRVKGFRAGATGHITSKWQVFAGYTYLDGEIING
IAASTTGKVPTNTPKHTATAWTSYRFLPNWEVGGGAFYMSERFANNTNTVQVGSFVRWDGMIAYHQPKYDVRLNLFNIFD
KMYYDALIQSDGGRSVPGTGRTAMLSFTYRM

Specific function: Probably involved in iron transport [H]

COG id: COG4774

COG function: function code P; Outer membrane receptor for monomeric catechols

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1787024, Length=760, Percent_Identity=27.8947368421053, Blast_Score=256, Evalue=3e-69,
Organism=Escherichia coli, GI1786344, Length=720, Percent_Identity=23.6111111111111, Blast_Score=154, Evalue=1e-38,
Organism=Escherichia coli, GI1787344, Length=225, Percent_Identity=27.5555555555556, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1790743, Length=290, Percent_Identity=25.5172413793103, Blast_Score=63, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 80965; Mature: 80965

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRFQRTPLATALIALSAVPAATLAQQAPATAPTQQAAAATTLKEVVVSGAASRDDFNA
CCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
GKTSLSKLPEDLHDVPQSVTIVNKALMESQGVNSLADALRNVPGITIGGAEGGQIGNNIN
CHHHHHHCCHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCCCCCCCCC
LNGFSARTDIYLDGFRDRGQYYRDTFALDQVEVLMGPSSMLFGRGSTGGVINQVTKKPQL
CCCEECEEEEEEECCHHCCHHHHHHHHHCCEEEEECCCHHEEECCCCCCHHHHHHCCCCC
KAATEVTGSVTTNGLVRATADYNTPTGETSAFRISAMGQDGRPTTRDEMTVQDFGIAPSW
HHHHHCCCCEECCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCEEHHHCCCCCCC
RLGIGTPTEITLSALLQHNHDMPDYGFSNINGHPTSVDRNTFYGFTDDRTNQDIAALNAS
EECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHCCH
ISHKFSPNLRLRNQTQFNYVETDARETAPNSVGSVSARGFTPLTTSALPLDQLFVRLQSH
HCCCCCCCCEECCCCCCCEEECCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC
DRKIRDYSIYNQTELTANFDTGSIKHTLLVGAEIGHDGYNNQNYYRNGSCNGQPLVSGTT
CCEEEEEEEECCEEEEEECCCCCEEEEEEEEEECCCCCCCCCCEEECCCCCCCEEECCCC
AATVGYVACEPVVNPTYTASPANAPASTGNLQGGSANTIAAYLNDSIELTKQWKAVAGLR
HHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCH
YDRYIASVSNSINSSNDAGAPYFSTALASADQTVNFTSVRLGGIWQPTEAQSYYVSYGTS
HHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEECCEECCCCCCEEEEEECCC
FNPSLEQLVGTVGQQSLDPEKNKSYEVGGKWDVMGGDLSLTSALFQITKDNARSQIDATT
CCCCHHHHHHHHCCCCCCCCCCCCEECCCEEEECCCCHHHHHHHHHHHHCCCHHHHCEEE
YALSGKIRVKGFRAGATGHITSKWQVFAGYTYLDGEIINGIAASTTGKVPTNTPKHTATA
EEEECEEEEEEEECCCCCCCCCCEEEEEEEEEECCHHHCCEECCCCCCCCCCCCCCCEEE
WTSYRFLPNWEVGGGAFYMSERFANNTNTVQVGSFVRWDGMIAYHQPKYDVRLNLFNIFD
EEEEEECCCCCCCCCEEEEEHHHCCCCCEEEECCEEEECCEEEEECCCCEEEEHHHHHHH
KMYYDALIQSDGGRSVPGTGRTAMLSFTYRM
HHHHHHHHCCCCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MNRRFQRTPLATALIALSAVPAATLAQQAPATAPTQQAAAATTLKEVVVSGAASRDDFNA
CCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
GKTSLSKLPEDLHDVPQSVTIVNKALMESQGVNSLADALRNVPGITIGGAEGGQIGNNIN
CHHHHHHCCHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCCCCCCCCC
LNGFSARTDIYLDGFRDRGQYYRDTFALDQVEVLMGPSSMLFGRGSTGGVINQVTKKPQL
CCCEECEEEEEEECCHHCCHHHHHHHHHCCEEEEECCCHHEEECCCCCCHHHHHHCCCCC
KAATEVTGSVTTNGLVRATADYNTPTGETSAFRISAMGQDGRPTTRDEMTVQDFGIAPSW
HHHHHCCCCEECCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCEEHHHCCCCCCC
RLGIGTPTEITLSALLQHNHDMPDYGFSNINGHPTSVDRNTFYGFTDDRTNQDIAALNAS
EECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHCCH
ISHKFSPNLRLRNQTQFNYVETDARETAPNSVGSVSARGFTPLTTSALPLDQLFVRLQSH
HCCCCCCCCEECCCCCCCEEECCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC
DRKIRDYSIYNQTELTANFDTGSIKHTLLVGAEIGHDGYNNQNYYRNGSCNGQPLVSGTT
CCEEEEEEEECCEEEEEECCCCCEEEEEEEEEECCCCCCCCCCEEECCCCCCCEEECCCC
AATVGYVACEPVVNPTYTASPANAPASTGNLQGGSANTIAAYLNDSIELTKQWKAVAGLR
HHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCH
YDRYIASVSNSINSSNDAGAPYFSTALASADQTVNFTSVRLGGIWQPTEAQSYYVSYGTS
HHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEECCEECCCCCCEEEEEECCC
FNPSLEQLVGTVGQQSLDPEKNKSYEVGGKWDVMGGDLSLTSALFQITKDNARSQIDATT
CCCCHHHHHHHHCCCCCCCCCCCCEECCCEEEECCCCHHHHHHHHHHHHCCCHHHHCEEE
YALSGKIRVKGFRAGATGHITSKWQVFAGYTYLDGEIINGIAASTTGKVPTNTPKHTATA
EEEECEEEEEEEECCCCCCCCCCEEEEEEEEEECCHHHCCEECCCCCCCCCCCCCCCEEE
WTSYRFLPNWEVGGGAFYMSERFANNTNTVQVGSFVRWDGMIAYHQPKYDVRLNLFNIFD
EEEEEECCCCCCCCCEEEEEHHHCCCCCEEEECCEEEECCEEEEECCCCEEEEHHHHHHH
KMYYDALIQSDGGRSVPGTGRTAMLSFTYRM
HHHHHHHHCCCCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12910271; 10079522 [H]