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The map label for this gene is pyrF [H]

Identifier: 73542536

GI number: 73542536

Start: 3124128

End: 3125036

Strand: Reverse

Name: pyrF [H]

Synonym: Reut_A2851

Alternate gene names: 73542536

Gene position: 3125036-3124128 (Counterclockwise)

Preceding gene: 73542539

Following gene: 73542532

Centisome position: 82.1

GC content: 64.47

Gene sequence:

>909_bases
ATGAGGGGGTCTATCCGCCCCAGCCCGCAGCAACCGGGTCGCCCGCCACGCGCCGGCGGCGCCGGAGCAACCAGGATATC
GAGTCAACCCATGACCTTCATCGAGCAGCTGTCTGCCGCCTGGCAGCGCAACGATTCCCTACTCTGCGTCGGACTCGATC
CCGACCCGCAGAAGCTGCCGCTGTCCCTGACCGGGGCCGGCGGCGCAATCTTTTCCTTCTGCCGCGAAATCGTCGACGCC
ACCGCGGACCTGGTCTGCGCATTCAAGCCGCAGATCGCTTACTTCCATTCGCAGCGCGCCGAAGACCAGCTGGAACAGCT
GATCCACTATATCCATGATGCGCACCCGGGTATTCCGGTGATCCTGGACGCCAAGCGTGGCGACATCGGCTCGACCGCCG
AGCACTACGCGAGCGAGGCATTCGAACGCTACAAGGCCGATGCGGTGACCGTGAGCCCCTATATGGGCTTCGATTCGATG
CAGCCGTACCTGGCCTATCCAGACCGCGGCGTGATCGTGCTGTGCCGCACGTCCAACCCGGGCGGCTCGGACGTCCAATT
TCTGCAGGTGGATGGCAAGCCGCTTTACCAACTCGTGGCCGAAGCCGCGAAGGAACGCTGGAATACGACGGGGCAGATGG
GCCTGGTGGTCGGCGCCACGTTCCCAAACGAGATCGCCCGTGTGCGGCAGATCGTTGGCGACATGCCGCTGCTGATTCCG
GGCATCGGCGCGCAGGGCGGCGATATCGAGGCAACGGTGAAGGCTGGCCGCACGGCTGACGGCACGGGCATGATGATCAA
CTCGTCGCGCGCGATTCTCTATGCGAGCGGCGAGAAGGATTTCGCCACCGCTGCACGCCATGTGGCGATGCAAACGCGGG
ATACCATCAACCGCTACCGGCACGGGTAA

Upstream 100 bases:

>100_bases
TGGATGGCGGCTGTGAACTACGCCGCTCTTTGTTTTGACTTTGAGCGCAAAACGATAGCACGCAGCGGGTAAAATTGCCG
GAAACGACATATGCTGCGAT

Downstream 100 bases:

>100_bases
TCCGAGCCAGGCTGTCAGATAGCGTCAGTACAGCAAAAGGCCGCGCCTGACCGGGCGCGGCCTTTGTCGTTTCAGGCCTC
GTTGCGTACCAGTTCCAGCA

Product: orotidine 5'-phosphate decarboxylase

Products: NA

Alternate protein names: OMP decarboxylase; OMPDCase; OMPdecase [H]

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MRGSIRPSPQQPGRPPRAGGAGATRISSQPMTFIEQLSAAWQRNDSLLCVGLDPDPQKLPLSLTGAGGAIFSFCREIVDA
TADLVCAFKPQIAYFHSQRAEDQLEQLIHYIHDAHPGIPVILDAKRGDIGSTAEHYASEAFERYKADAVTVSPYMGFDSM
QPYLAYPDRGVIVLCRTSNPGGSDVQFLQVDGKPLYQLVAEAAKERWNTTGQMGLVVGATFPNEIARVRQIVGDMPLLIP
GIGAQGGDIEATVKAGRTADGTGMMINSSRAILYASGEKDFATAARHVAMQTRDTINRYRHG

Sequences:

>Translated_302_residues
MRGSIRPSPQQPGRPPRAGGAGATRISSQPMTFIEQLSAAWQRNDSLLCVGLDPDPQKLPLSLTGAGGAIFSFCREIVDA
TADLVCAFKPQIAYFHSQRAEDQLEQLIHYIHDAHPGIPVILDAKRGDIGSTAEHYASEAFERYKADAVTVSPYMGFDSM
QPYLAYPDRGVIVLCRTSNPGGSDVQFLQVDGKPLYQLVAEAAKERWNTTGQMGLVVGATFPNEIARVRQIVGDMPLLIP
GIGAQGGDIEATVKAGRTADGTGMMINSSRAILYASGEKDFATAARHVAMQTRDTINRYRHG
>Mature_302_residues
MRGSIRPSPQQPGRPPRAGGAGATRISSQPMTFIEQLSAAWQRNDSLLCVGLDPDPQKLPLSLTGAGGAIFSFCREIVDA
TADLVCAFKPQIAYFHSQRAEDQLEQLIHYIHDAHPGIPVILDAKRGDIGSTAEHYASEAFERYKADAVTVSPYMGFDSM
QPYLAYPDRGVIVLCRTSNPGGSDVQFLQVDGKPLYQLVAEAAKERWNTTGQMGLVVGATFPNEIARVRQIVGDMPLLIP
GIGAQGGDIEATVKAGRTADGTGMMINSSRAILYASGEKDFATAARHVAMQTRDTINRYRHG

Specific function: Unknown

COG id: COG0284

COG function: function code F; Orotidine-5'-phosphate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OMP decarboxylase family. Type 2 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR018089
- InterPro:   IPR011995
- InterPro:   IPR001754
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00215 OMPdecase [H]

EC number: =4.1.1.23 [H]

Molecular weight: Translated: 32618; Mature: 32618

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: PS00156 OMPDECASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGSIRPSPQQPGRPPRAGGAGATRISSQPMTFIEQLSAAWQRNDSLLCVGLDPDPQKLP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
LSLTGAGGAIFSFCREIVDATADLVCAFKPQIAYFHSQRAEDQLEQLIHYIHDAHPGIPV
EEEECCCHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
ILDAKRGDIGSTAEHYASEAFERYKADAVTVSPYMGFDSMQPYLAYPDRGVIVLCRTSNP
EEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEECCCCCEEEEEECCCC
GGSDVQFLQVDGKPLYQLVAEAAKERWNTTGQMGLVVGATFPNEIARVRQIVGDMPLLIP
CCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEE
GIGAQGGDIEATVKAGRTADGTGMMINSSRAILYASGEKDFATAARHVAMQTRDTINRYR
CCCCCCCCEEEEEECCCCCCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHC
HG
CC
>Mature Secondary Structure
MRGSIRPSPQQPGRPPRAGGAGATRISSQPMTFIEQLSAAWQRNDSLLCVGLDPDPQKLP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
LSLTGAGGAIFSFCREIVDATADLVCAFKPQIAYFHSQRAEDQLEQLIHYIHDAHPGIPV
EEEECCCHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
ILDAKRGDIGSTAEHYASEAFERYKADAVTVSPYMGFDSMQPYLAYPDRGVIVLCRTSNP
EEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEECCCCCEEEEEECCCC
GGSDVQFLQVDGKPLYQLVAEAAKERWNTTGQMGLVVGATFPNEIARVRQIVGDMPLLIP
CCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEE
GIGAQGGDIEATVKAGRTADGTGMMINSSRAILYASGEKDFATAARHVAMQTRDTINRYR
CCCCCCCCEEEEEECCCCCCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHC
HG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA