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The map label for this gene is dedA [H]

Identifier: 73542453

GI number: 73542453

Start: 3036182

End: 3036820

Strand: Reverse

Name: dedA [H]

Synonym: Reut_A2768

Alternate gene names: 73542453

Gene position: 3036820-3036182 (Counterclockwise)

Preceding gene: 73542456

Following gene: 73542450

Centisome position: 79.78

GC content: 63.07

Gene sequence:

>639_bases
ATGCTCCTGCATGTCGACAAATATCTCGGCACGGTTATCCAGCAATACGGTGCATGGGTCTATGCGATCCTGTTCCTCAT
CGTATTTGCCGAAACCGGGCTGGTGGTGCTGCCGTTCCTGCCGGGCGACTCGCTGCTGTTCATTGCGGGCGCGTTCTGCG
CAACCGGCGCCATGAATGAATGGGTGCTGATCGGGCTGCTGCTGGCGGCGGCGATTTCGGGCAACACCGTGAACTACTGG
GTCGGCAGCTGGATCGGGCCCAAGGTGTTCGACCATCAATGGCGCTTTCTCGACCAGAAAGCGCTGCGCCGCACACACGA
TTTCTACGAGCGCCACGGTGGCAAGACCCTCGTGATGGCGCGCTTCGTGCCGATCGTGCGCACCTTCGCGCCGTTCGTCG
CGGGCGTGTCGCAGATGACGTTCGCGCGCTTCCAGTTCTTCAACGTGATCGGCGCAATGGCGTGGGTCGCGGGGCTTGTG
TTTGCGGGCTATTTCTTCGGCAACCTGCCGTTCATCAAGCAGTACCTGAACCTGATCGTGCTGGCCGGTATCGGCGCGGC
TGTGGTGCCGCTGGTGCTGGGCGGGCTGTGGCGGCTGGTGCGCGGCAACAAGCGCAGCACGCCGAGCGTCGAGCGCTGA

Upstream 100 bases:

>100_bases
TGACCGATGCGTCGGGCGGGTCTTGTATGATGTCGCGCTTGGTGAAGTAACCTACAACATAACGGGGAACGACTTGGATC
TCGCTCTGCAGCTCATCGAC

Downstream 100 bases:

>100_bases
ACCCGCTCTGCCGCGGTCTCAGTTGAGGCTGCGGCTCATCATGCGCAGGGCCGGCATGCGGTCGCGAATCTGCGCGATGT
CGGCGGCGTCCGGGCGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MLLHVDKYLGTVIQQYGAWVYAILFLIVFAETGLVVLPFLPGDSLLFIAGAFCATGAMNEWVLIGLLLAAAISGNTVNYW
VGSWIGPKVFDHQWRFLDQKALRRTHDFYERHGGKTLVMARFVPIVRTFAPFVAGVSQMTFARFQFFNVIGAMAWVAGLV
FAGYFFGNLPFIKQYLNLIVLAGIGAAVVPLVLGGLWRLVRGNKRSTPSVER

Sequences:

>Translated_212_residues
MLLHVDKYLGTVIQQYGAWVYAILFLIVFAETGLVVLPFLPGDSLLFIAGAFCATGAMNEWVLIGLLLAAAISGNTVNYW
VGSWIGPKVFDHQWRFLDQKALRRTHDFYERHGGKTLVMARFVPIVRTFAPFVAGVSQMTFARFQFFNVIGAMAWVAGLV
FAGYFFGNLPFIKQYLNLIVLAGIGAAVVPLVLGGLWRLVRGNKRSTPSVER
>Mature_212_residues
MLLHVDKYLGTVIQQYGAWVYAILFLIVFAETGLVVLPFLPGDSLLFIAGAFCATGAMNEWVLIGLLLAAAISGNTVNYW
VGSWIGPKVFDHQWRFLDQKALRRTHDFYERHGGKTLVMARFVPIVRTFAPFVAGVSQMTFARFQFFNVIGAMAWVAGLV
FAGYFFGNLPFIKQYLNLIVLAGIGAAVVPLVLGGLWRLVRGNKRSTPSVER

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=203, Percent_Identity=48.7684729064039, Blast_Score=202, Evalue=1e-53,
Organism=Escherichia coli, GI1789481, Length=157, Percent_Identity=40.1273885350318, Blast_Score=107, Evalue=7e-25,
Organism=Escherichia coli, GI1789384, Length=162, Percent_Identity=37.6543209876543, Blast_Score=101, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23550; Mature: 23550

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLHVDKYLGTVIQQYGAWVYAILFLIVFAETGLVVLPFLPGDSLLFIAGAFCATGAMNE
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCHH
WVLIGLLLAAAISGNTVNYWVGSWIGPKVFDHQWRFLDQKALRRTHDFYERHGGKTLVMA
HHHHHHHHHHHHCCCCEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHH
RFVPIVRTFAPFVAGVSQMTFARFQFFNVIGAMAWVAGLVFAGYFFGNLPFIKQYLNLIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LAGIGAAVVPLVLGGLWRLVRGNKRSTPSVER
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLLHVDKYLGTVIQQYGAWVYAILFLIVFAETGLVVLPFLPGDSLLFIAGAFCATGAMNE
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCHH
WVLIGLLLAAAISGNTVNYWVGSWIGPKVFDHQWRFLDQKALRRTHDFYERHGGKTLVMA
HHHHHHHHHHHHCCCCEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHH
RFVPIVRTFAPFVAGVSQMTFARFQFFNVIGAMAWVAGLVFAGYFFGNLPFIKQYLNLIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LAGIGAAVVPLVLGGLWRLVRGNKRSTPSVER
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]