| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is yajQ [C]
Identifier: 73542445
GI number: 73542445
Start: 3029216
End: 3029701
Strand: Reverse
Name: yajQ [C]
Synonym: Reut_A2760
Alternate gene names: 73542445
Gene position: 3029701-3029216 (Counterclockwise)
Preceding gene: 73542447
Following gene: 73542441
Centisome position: 79.59
GC content: 59.47
Gene sequence:
>486_bases ATGCCGTCGTTTGACGTAGTGTGCGAAGCGAACATGGTCGAGGTCAAGAATGCGGTCGAGCAGGCCAACAAGGAGATCTC GACGCGGTTCGATTTCAAGGGTTCGGACGCACGGGTCGAGCAGAAGGAGGGCGAACTGACCGCCTTTGCCGACGATGATT TCAAGCTGGGGCAGGTCAAGGACGTGCTGCTCAACAAGATGGCCAAGCGCAACGTCGACGTGCGGTTCCTCGACTACGGC AAGGTCGAGAAGATCAGCGGCGACAAGGTCAAGCAAGTCATCACGATCAAGAAGGGCGTGACTGGCGACCTGGGCAAGAA GATCGTGCGCATGATCAAGGACAGCAAGATCAAGGTCCAGGGCAGCATCCAGGGCGACGCCGTGCGCGTGTCCGGCACCA AGCGCGATGATCTGCAGAGCGTGATCGCCATGCTGCGCAAGGACGTGTCCGAGGCGCCGCTGGACTTCAACAACTTCCGG GACTGA
Upstream 100 bases:
>100_bases GGTGCTCCGTGGAGCGCGAGGCAGGCTGGATTATACGGAAGTACCGGCGCGGACCGCCCGGGTTGCGGGCGCCGGACAGG CAAGTGACAAGGAGAATGCA
Downstream 100 bases:
>100_bases TTGCCCCGTACCTGTAGGGGCGCCGGTGCAATGCCGGCGCCTCGCTGCAGCGTGCGCTCAGCGCGGCTGCGGCAGTCCGC CTATCTTCGCCCCGGCCCGG
Product: putative nucleotide-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MPSFDVVCEANMVEVKNAVEQANKEISTRFDFKGSDARVEQKEGELTAFADDDFKLGQVKDVLLNKMAKRNVDVRFLDYG KVEKISGDKVKQVITIKKGVTGDLGKKIVRMIKDSKIKVQGSIQGDAVRVSGTKRDDLQSVIAMLRKDVSEAPLDFNNFR D
Sequences:
>Translated_161_residues MPSFDVVCEANMVEVKNAVEQANKEISTRFDFKGSDARVEQKEGELTAFADDDFKLGQVKDVLLNKMAKRNVDVRFLDYG KVEKISGDKVKQVITIKKGVTGDLGKKIVRMIKDSKIKVQGSIQGDAVRVSGTKRDDLQSVIAMLRKDVSEAPLDFNNFR D >Mature_160_residues PSFDVVCEANMVEVKNAVEQANKEISTRFDFKGSDARVEQKEGELTAFADDDFKLGQVKDVLLNKMAKRNVDVRFLDYGK VEKISGDKVKQVITIKKGVTGDLGKKIVRMIKDSKIKVQGSIQGDAVRVSGTKRDDLQSVIAMLRKDVSEAPLDFNNFRD
Specific function: Unknown
COG id: COG1666
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0234 family [H]
Homologues:
Organism=Escherichia coli, GI87081737, Length=163, Percent_Identity=42.3312883435583, Blast_Score=126, Evalue=7e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007551 [H]
Pfam domain/function: PF04461 DUF520 [H]
EC number: NA
Molecular weight: Translated: 17986; Mature: 17855
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSFDVVCEANMVEVKNAVEQANKEISTRFDFKGSDARVEQKEGELTAFADDDFKLGQVK CCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCEEEEECCCCCCHHHH DVLLNKMAKRNVDVRFLDYGKVEKISGDKVKQVITIKKGVTGDLGKKIVRMIKDSKIKVQ HHHHHHHHHCCCCEEEECCCCEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEE GSIQGDAVRVSGTKRDDLQSVIAMLRKDVSEAPLDFNNFRD ECCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PSFDVVCEANMVEVKNAVEQANKEISTRFDFKGSDARVEQKEGELTAFADDDFKLGQVK CCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCEEEEECCCCCCHHHH DVLLNKMAKRNVDVRFLDYGKVEKISGDKVKQVITIKKGVTGDLGKKIVRMIKDSKIKVQ HHHHHHHHHCCCCEEEECCCCEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEE GSIQGDAVRVSGTKRDDLQSVIAMLRKDVSEAPLDFNNFRD ECCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA