| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is tyrC [H]
Identifier: 73542258
GI number: 73542258
Start: 2817899
End: 2818795
Strand: Reverse
Name: tyrC [H]
Synonym: Reut_A2573
Alternate gene names: 73542258
Gene position: 2818795-2817899 (Counterclockwise)
Preceding gene: 73542259
Following gene: 73542257
Centisome position: 74.05
GC content: 66.0
Gene sequence:
>897_bases GTGAGCGCTCTGCATTTTTCCCGTGTTGTGATTGTCGGTGTCGGCCTGATTGGCGGTTCGCTTGCGCTTGCGCTCAAGCG CGCGGGCGTCGTTGGGACAGTGGTCGGCGTGGGTCGCTCGCCCGCGTCGCTGCAAAAGGCGCTTGATCTGGGTGTCATCG ACGAGGCCGCTTCGCTGGAAGAGGCGGCGCGCGACGCCAGCCTGGTCGTGCTGTGCGCGCCGGTCGCGCAGAATTTTGCG TTGCTGCATGCGCTGGAGCCGCACCTGCAGCCGGGCACGATCGTGACTGATGCGGGCAGCACCAAGTCCGACGTCATCAT GGCGGCCAAGACTGCGCTGGGCGACAAGGTCGCGCAGTTTGTTCCGGCACATCCGATTGCGGGGCGCGAACTCAATGGCG TCGAGGCCGCGCTGGCGGATCTATATGTCGGCAAGAAGACCGTGCTATGCCCGTTGCAGGAGAATTCGCGTGCCGATGTC GCTGCCGTGCGCGCGATGTGGGAAAGCGCGGGGGCCGAATGCCACGTCATGTCCGCCGTGCAGCACGACGCGGTGTTCGC TTCGGTCAGCCACCTGCCGCACGTGCTGTCGTATGCGCTGGTGGCGCAGGTCGGCAATGCGGAAGACGCAGCGCTCAAGC TGGCGTTTGCTGGCGGCGGCTTCCGCGATTTCACGCGCATTGCCGCGTCGTCGCCGGAGATGTGGCGTGATATCTGCGTG GCCAACCGCGAGGCGCTGCTGCGCGAGCTGAACACCTACCAGTCGGTGCTGACGCATCTGAAGACGCAGATCGAGAAGGG CGACGGCGCGGCGCTGGAACGCATCTTTGCGCGCGCGAGCAAGACTCGCCTGCAATGGGGCGCCGACCGGGCAGCCGCGG CGAATACTGAACCCTGA
Upstream 100 bases:
>100_bases TCATCGCGGCGCTGGAGCGCGCGCTGAAGTAACCGCGCGCAACGGCCATGCATTTCCTTTTTCGAATTTCCCGTATTGCC CGCCCCCGAGGGCTGAGATT
Downstream 100 bases:
>100_bases ACTGGCGCGGCCACGAGCCGTGCCTAGCGTGAATACCATGGAACACCTGACGCTTGGCCCTCTTACCCGCGCCGCGGGCA CTGTCCGTTTGCCGGGCTCG
Product: prephenate dehydrogenase
Products: NA
Alternate protein names: Arogenate dehydrogenase; ADH; Cyclohexadienyl dehydrogenase; Prephenate dehydrogenase; PDH [H]
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MSALHFSRVVIVGVGLIGGSLALALKRAGVVGTVVGVGRSPASLQKALDLGVIDEAASLEEAARDASLVVLCAPVAQNFA LLHALEPHLQPGTIVTDAGSTKSDVIMAAKTALGDKVAQFVPAHPIAGRELNGVEAALADLYVGKKTVLCPLQENSRADV AAVRAMWESAGAECHVMSAVQHDAVFASVSHLPHVLSYALVAQVGNAEDAALKLAFAGGGFRDFTRIAASSPEMWRDICV ANREALLRELNTYQSVLTHLKTQIEKGDGAALERIFARASKTRLQWGADRAAAANTEP
Sequences:
>Translated_298_residues MSALHFSRVVIVGVGLIGGSLALALKRAGVVGTVVGVGRSPASLQKALDLGVIDEAASLEEAARDASLVVLCAPVAQNFA LLHALEPHLQPGTIVTDAGSTKSDVIMAAKTALGDKVAQFVPAHPIAGRELNGVEAALADLYVGKKTVLCPLQENSRADV AAVRAMWESAGAECHVMSAVQHDAVFASVSHLPHVLSYALVAQVGNAEDAALKLAFAGGGFRDFTRIAASSPEMWRDICV ANREALLRELNTYQSVLTHLKTQIEKGDGAALERIFARASKTRLQWGADRAAAANTEP >Mature_297_residues SALHFSRVVIVGVGLIGGSLALALKRAGVVGTVVGVGRSPASLQKALDLGVIDEAASLEEAARDASLVVLCAPVAQNFAL LHALEPHLQPGTIVTDAGSTKSDVIMAAKTALGDKVAQFVPAHPIAGRELNGVEAALADLYVGKKTVLCPLQENSRADVA AVRAMWESAGAECHVMSAVQHDAVFASVSHLPHVLSYALVAQVGNAEDAALKLAFAGGGFRDFTRIAASSPEMWRDICVA NREALLRELNTYQSVLTHLKTQIEKGDGAALERIFARASKTRLQWGADRAAAANTEP
Specific function: Is competent to function as either prephenate dehydrogenase or as arogenate dehydrogenase [H]
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR003099 [H]
Pfam domain/function: PF02153 PDH [H]
EC number: =1.3.1.43; =1.3.1.12 [H]
Molecular weight: Translated: 31141; Mature: 31010
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALHFSRVVIVGVGLIGGSLALALKRAGVVGTVVGVGRSPASLQKALDLGVIDEAASLE CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHH EAARDASLVVLCAPVAQNFALLHALEPHLQPGTIVTDAGSTKSDVIMAAKTALGDKVAQF HHHCCCCEEEEECCHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHH VPAHPIAGRELNGVEAALADLYVGKKTVLCPLQENSRADVAAVRAMWESAGAECHVMSAV CCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEHHHH QHDAVFASVSHLPHVLSYALVAQVGNAEDAALKLAFAGGGFRDFTRIAASSPEMWRDICV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHH ANREALLRELNTYQSVLTHLKTQIEKGDGAALERIFARASKTRLQWGADRAAAANTEP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCC >Mature Secondary Structure SALHFSRVVIVGVGLIGGSLALALKRAGVVGTVVGVGRSPASLQKALDLGVIDEAASLE CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHH EAARDASLVVLCAPVAQNFALLHALEPHLQPGTIVTDAGSTKSDVIMAAKTALGDKVAQF HHHCCCCEEEEECCHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHH VPAHPIAGRELNGVEAALADLYVGKKTVLCPLQENSRADVAAVRAMWESAGAECHVMSAV CCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEHHHH QHDAVFASVSHLPHVLSYALVAQVGNAEDAALKLAFAGGGFRDFTRIAASSPEMWRDICV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHH ANREALLRELNTYQSVLTHLKTQIEKGDGAALERIFARASKTRLQWGADRAAAANTEP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7916685 [H]