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The map label for this gene is yciM [H]

Identifier: 73542251

GI number: 73542251

Start: 2811508

End: 2812731

Strand: Reverse

Name: yciM [H]

Synonym: Reut_A2566

Alternate gene names: 73542251

Gene position: 2812731-2811508 (Counterclockwise)

Preceding gene: 73542252

Following gene: 73542250

Centisome position: 73.89

GC content: 64.87

Gene sequence:

>1224_bases
ATGATGTTTGAAACCTGGTGGCTGCTTGCGCTGCCACTTGTCTTTGGCCTTGGATGGATGGCGGCACGCTTCGATGTGCG
CCAGCTCATCAGCGAGCAGGGTGCCTTGCCGCGCTCGTATTTCAAGGGCCTCAATTTCCTGCTCAATGAGCAGCCGGACC
AGGCCATCGACGCCTTCATCGAGGTCGCGCGGCTCGATCCGGAGACCACCGAACTGCACTTTGCGCTTGGCGCGCTGTTC
CGTCGCCGTGGCGAAACCGAGCGCGCCATCCGTGTGCACCAGAACCTCGCCACACGTCCGGATCTGCCCGAGCCAGAGCG
TGAGCACGCGCTGTATGAACTGGGGCAGGACTTCTTGCGTGCGGGCCTGCTGGATCGCGCCGAAGAGTCGTTGCGCCGGC
TGATGTCTGGCCCGTACGCGGCGTCAGCCAAGCGGGTGCTGCTTGAACTCTATGAAGTGGAGAAAGAATGGCAGAAGGCC
ATCGATGCCGCGCGCGAGCTGCAGGCGCTCGAGAATAAGGACTACCGCCTGCAAATTGCCCAGTTCTGCTGCGAACTGGC
GCAGGATGCGCTGCAACGCAAGCGTCCTGAAGACGCCGTCAAGTGGCTGAACCAGGCGGTCCAGGAAAATCCCGCCAATG
TGCGCGCGCCGATCCTGCTTGGCGATGTGGCGGCGGCTGCCGGTAATGCGCGCGCCGCGTTGGGCCACTGGCTCGGCATC
GAGCGACAGGATGCGTCCTTCCTGCCGCTGGTCGCAGAGCGCGTGGTGAAAGCCTATGCCGGCCTCGGCGAACAAGGCGT
CGCACTGGATTGGCTGCGCGGTCTGCTGAAGGGCAGTCTTGCGGCTGAACTGCTCGACGTTGCGTTCAAGACGGAACTCG
ACCAGAACGGGCCGGAAGCGGCGACCCGGCTGATGCGCGAGCAACTGCGCCGCCAGCCGACGCTGCTGGCCCTGACCCGG
TACTTCGAGGCGCAGGCCGCCAGTATGGCGCCAGCCGGCGCAATGGCCGGCAATGGCAGCGAAGCCGATACCGGCGAGAC
CGTTGAGGGCGACAAGACAAAGGAGGTCACGGCGATCCGCGACCTGCTGCAATTGCGTACGCGCAACCTGGCCCGCTACA
CCTGCCGCGAATGCGGCTTCCGTGCGCGGCTTTTCTACTGGCAATGTCCCGGCTGCAACCGCTGGGAGACCTATGCGCCC
CGGCGATCCGAAGCGCTCGGCTGA

Upstream 100 bases:

>100_bases
CCGTGCGCTCGGTGATGCCGGCCGTCAAGCGGCCCCCGATAATGCCGCACGTGAAGGCAAAAGTGCTCCTTACAACGTAA
TTGGCCCGAAAGTCTGATCC

Downstream 100 bases:

>100_bases
CCAGGCCGCCACGCGAACTAATTTCATGTAAATGCTATGAAAGTCACCATTATTGGCAGTGGCTATGTTGGCCTCGTTAC
CGGCGCGTGCCTGGCCGAAC

Product: tetratricopeptide repeat protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MMFETWWLLALPLVFGLGWMAARFDVRQLISEQGALPRSYFKGLNFLLNEQPDQAIDAFIEVARLDPETTELHFALGALF
RRRGETERAIRVHQNLATRPDLPEPEREHALYELGQDFLRAGLLDRAEESLRRLMSGPYAASAKRVLLELYEVEKEWQKA
IDAARELQALENKDYRLQIAQFCCELAQDALQRKRPEDAVKWLNQAVQENPANVRAPILLGDVAAAAGNARAALGHWLGI
ERQDASFLPLVAERVVKAYAGLGEQGVALDWLRGLLKGSLAAELLDVAFKTELDQNGPEAATRLMREQLRRQPTLLALTR
YFEAQAASMAPAGAMAGNGSEADTGETVEGDKTKEVTAIRDLLQLRTRNLARYTCRECGFRARLFYWQCPGCNRWETYAP
RRSEALG

Sequences:

>Translated_407_residues
MMFETWWLLALPLVFGLGWMAARFDVRQLISEQGALPRSYFKGLNFLLNEQPDQAIDAFIEVARLDPETTELHFALGALF
RRRGETERAIRVHQNLATRPDLPEPEREHALYELGQDFLRAGLLDRAEESLRRLMSGPYAASAKRVLLELYEVEKEWQKA
IDAARELQALENKDYRLQIAQFCCELAQDALQRKRPEDAVKWLNQAVQENPANVRAPILLGDVAAAAGNARAALGHWLGI
ERQDASFLPLVAERVVKAYAGLGEQGVALDWLRGLLKGSLAAELLDVAFKTELDQNGPEAATRLMREQLRRQPTLLALTR
YFEAQAASMAPAGAMAGNGSEADTGETVEGDKTKEVTAIRDLLQLRTRNLARYTCRECGFRARLFYWQCPGCNRWETYAP
RRSEALG
>Mature_407_residues
MMFETWWLLALPLVFGLGWMAARFDVRQLISEQGALPRSYFKGLNFLLNEQPDQAIDAFIEVARLDPETTELHFALGALF
RRRGETERAIRVHQNLATRPDLPEPEREHALYELGQDFLRAGLLDRAEESLRRLMSGPYAASAKRVLLELYEVEKEWQKA
IDAARELQALENKDYRLQIAQFCCELAQDALQRKRPEDAVKWLNQAVQENPANVRAPILLGDVAAAAGNARAALGHWLGI
ERQDASFLPLVAERVVKAYAGLGEQGVALDWLRGLLKGSLAAELLDVAFKTELDQNGPEAATRLMREQLRRQPTLLALTR
YFEAQAASMAPAGAMAGNGSEADTGETVEGDKTKEVTAIRDLLQLRTRNLARYTCRECGFRARLFYWQCPGCNRWETYAP
RRSEALG

Specific function: Unknown

COG id: COG2956

COG function: function code G; Predicted N-acetylglucosaminyl transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 6 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI2367116, Length=393, Percent_Identity=31.0432569974555, Blast_Score=197, Evalue=1e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45827; Mature: 45827

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFETWWLLALPLVFGLGWMAARFDVRQLISEQGALPRSYFKGLNFLLNEQPDQAIDAFI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHH
EVARLDPETTELHFALGALFRRRGETERAIRVHQNLATRPDLPEPEREHALYELGQDFLR
HHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
AGLLDRAEESLRRLMSGPYAASAKRVLLELYEVEKEWQKAIDAARELQALENKDYRLQIA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
QFCCELAQDALQRKRPEDAVKWLNQAVQENPANVRAPILLGDVAAAAGNARAALGHWLGI
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHCCCHHHHHHHHHCC
ERQDASFLPLVAERVVKAYAGLGEQGVALDWLRGLLKGSLAAELLDVAFKTELDQNGPEA
CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ATRLMREQLRRQPTLLALTRYFEAQAASMAPAGAMAGNGSEADTGETVEGDKTKEVTAIR
HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
DLLQLRTRNLARYTCRECGFRARLFYWQCPGCNRWETYAPRRSEALG
HHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MMFETWWLLALPLVFGLGWMAARFDVRQLISEQGALPRSYFKGLNFLLNEQPDQAIDAFI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHH
EVARLDPETTELHFALGALFRRRGETERAIRVHQNLATRPDLPEPEREHALYELGQDFLR
HHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
AGLLDRAEESLRRLMSGPYAASAKRVLLELYEVEKEWQKAIDAARELQALENKDYRLQIA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
QFCCELAQDALQRKRPEDAVKWLNQAVQENPANVRAPILLGDVAAAAGNARAALGHWLGI
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHCCCHHHHHHHHHCC
ERQDASFLPLVAERVVKAYAGLGEQGVALDWLRGLLKGSLAAELLDVAFKTELDQNGPEA
CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ATRLMREQLRRQPTLLALTRYFEAQAASMAPAGAMAGNGSEADTGETVEGDKTKEVTAIR
HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
DLLQLRTRNLARYTCRECGFRARLFYWQCPGCNRWETYAPRRSEALG
HHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]