Click here to switch to the map view.

The map label for this gene is opuCC [H]

Identifier: 73542180

GI number: 73542180

Start: 2734630

End: 2735577

Strand: Reverse

Name: opuCC [H]

Synonym: Reut_A2495

Alternate gene names: 73542180

Gene position: 2735577-2734630 (Counterclockwise)

Preceding gene: 73542181

Following gene: 73542179

Centisome position: 71.87

GC content: 64.98

Gene sequence:

>948_bases
ATGCAATCGAAACGAGACCGCGAAGGCCGTGCCTTCTGGGCCTTCATGCTCTTGGGCACCATCGTGGCCGCCGTGCTGCT
GAGTTCCGCGCCGGCCCGTGCGCAGGCGCCAGCAGCGAATGCCGCGCCGGTGCGCGTGGGCGGCAAGAACTTTACCGAGC
AGCTGATCCTGTCGTCGATGACGTCGCAGTACCTGCGCGCCAAGGGCCTCGGCACCGAGCTGACCTCGGGCCTGGGCAGC
ACGCTGATGCGCCAGGCGATGGAGAACGGCCAGCTCGACGTGGTGTGGGACTACACCGGCACGGCGCTGATCGTCTTCAA
CAAGGTCGAGGAAAAGCTCGACGCAAAGGCAAGCTACGCGCGTGTGAAGACGCTGGACGCCGCACGCGGCCTGGTCTGGC
TGGAGCCGTCGCGCATCAATAATACCTATGCGCTGGCCATGCCGAAGCAGCGCGCGCAGGCCAGCGGCGTCACCACGCTG
TCGGCGTATGCCGAGAAGATGCGCAAGGCCGGCGAGGACGCGCAGCATCCGTTTGCCGTCGACATGGAATTCGCGGCGCG
CCCTGACGGGCTGGAGCCGCTCAAGGCCCAGTACAAGCTGCCGTTCAAGCGCCGCGACGTGATCCAGCTTGATCCTGGCC
TGGTCTATACGGCGCTCAAGAACAATCAGGTCGACATGGGCCTGGTGTACACGACCGATGGCCGCGTGAAGGGCTTCGAA
CTCGTGCTGCTCGAAGACGATCTGCACTTCTTCCCCGACTACAGCGCGGTGCCCGTGGTGCGCAAGGCCGTGCTGGACAA
GCATCCCGAACTCGCCACGCTGCTCGATGCGCTGTCGGCGAAGCTGGACAACGCATCGATGACCGAGATGAACTACCAGG
TGGACATCGGCCAGCAGCCGGTGGACAAGGTGGCCGCAGACTTCCTGCGCAGCCATGGCCTGATCTGA

Upstream 100 bases:

>100_bases
CTGCTGGCGCTGGCGCTCGACGCGCTGTTTGCCGGCGCCGGCAGCCTGTACCTGCGCCGGCGCGGACTGGCGCGCTGAGC
GGCGGCCGAGAGGAAAACCA

Downstream 100 bases:

>100_bases
GGAGGCACGCATGGACTTGCTGACCTACCTCCAACATAGCTGGCCGACGCTGCTGAAGCTCACTGCCGAGCATCTGGCGC
TCGTCGGCTCGGCCGTGGGC

Product: substrate-binding region of ABC-type glycine betaine transport system

Products: NA

Alternate protein names: Osmoprotectant-binding protein [H]

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MQSKRDREGRAFWAFMLLGTIVAAVLLSSAPARAQAPAANAAPVRVGGKNFTEQLILSSMTSQYLRAKGLGTELTSGLGS
TLMRQAMENGQLDVVWDYTGTALIVFNKVEEKLDAKASYARVKTLDAARGLVWLEPSRINNTYALAMPKQRAQASGVTTL
SAYAEKMRKAGEDAQHPFAVDMEFAARPDGLEPLKAQYKLPFKRRDVIQLDPGLVYTALKNNQVDMGLVYTTDGRVKGFE
LVLLEDDLHFFPDYSAVPVVRKAVLDKHPELATLLDALSAKLDNASMTEMNYQVDIGQQPVDKVAADFLRSHGLI

Sequences:

>Translated_315_residues
MQSKRDREGRAFWAFMLLGTIVAAVLLSSAPARAQAPAANAAPVRVGGKNFTEQLILSSMTSQYLRAKGLGTELTSGLGS
TLMRQAMENGQLDVVWDYTGTALIVFNKVEEKLDAKASYARVKTLDAARGLVWLEPSRINNTYALAMPKQRAQASGVTTL
SAYAEKMRKAGEDAQHPFAVDMEFAARPDGLEPLKAQYKLPFKRRDVIQLDPGLVYTALKNNQVDMGLVYTTDGRVKGFE
LVLLEDDLHFFPDYSAVPVVRKAVLDKHPELATLLDALSAKLDNASMTEMNYQVDIGQQPVDKVAADFLRSHGLI
>Mature_315_residues
MQSKRDREGRAFWAFMLLGTIVAAVLLSSAPARAQAPAANAAPVRVGGKNFTEQLILSSMTSQYLRAKGLGTELTSGLGS
TLMRQAMENGQLDVVWDYTGTALIVFNKVEEKLDAKASYARVKTLDAARGLVWLEPSRINNTYALAMPKQRAQASGVTTL
SAYAEKMRKAGEDAQHPFAVDMEFAARPDGLEPLKAQYKLPFKRRDVIQLDPGLVYTALKNNQVDMGLVYTTDGRVKGFE
LVLLEDDLHFFPDYSAVPVVRKAVLDKHPELATLLDALSAKLDNASMTEMNYQVDIGQQPVDKVAADFLRSHGLI

Specific function: Member of a high affinity multicomponent binding- protein-dependent transport system for glycine betaine, carnitine, and choline [H]

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788452, Length=286, Percent_Identity=29.7202797202797, Blast_Score=124, Evalue=7e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 34580; Mature: 34580

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSKRDREGRAFWAFMLLGTIVAAVLLSSAPARAQAPAANAAPVRVGGKNFTEQLILSSM
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHH
TSQYLRAKGLGTELTSGLGSTLMRQAMENGQLDVVWDYTGTALIVFNKVEEKLDAKASYA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHH
RVKTLDAARGLVWLEPSRINNTYALAMPKQRAQASGVTTLSAYAEKMRKAGEDAQHPFAV
HHHHHHHHCCEEEECCCCCCCEEEEECCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEE
DMEFAARPDGLEPLKAQYKLPFKRRDVIQLDPGLVYTALKNNQVDMGLVYTTDGRVKGFE
EEECCCCCCCCCCHHHHHCCCCCCCCEEEECCCEEEEEECCCCEEEEEEEECCCCCCCEE
LVLLEDDLHFFPDYSAVPVVRKAVLDKHPELATLLDALSAKLDNASMTEMNYQVDIGQQP
EEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECCCCC
VDKVAADFLRSHGLI
HHHHHHHHHHHCCCC
>Mature Secondary Structure
MQSKRDREGRAFWAFMLLGTIVAAVLLSSAPARAQAPAANAAPVRVGGKNFTEQLILSSM
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHH
TSQYLRAKGLGTELTSGLGSTLMRQAMENGQLDVVWDYTGTALIVFNKVEEKLDAKASYA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHH
RVKTLDAARGLVWLEPSRINNTYALAMPKQRAQASGVTTLSAYAEKMRKAGEDAQHPFAV
HHHHHHHHCCEEEECCCCCCCEEEEECCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEE
DMEFAARPDGLEPLKAQYKLPFKRRDVIQLDPGLVYTALKNNQVDMGLVYTTDGRVKGFE
EEECCCCCCCCCCHHHHHCCCCCCCCEEEECCCEEEEEECCCCEEEEEEEECCCCCCCEE
LVLLEDDLHFFPDYSAVPVVRKAVLDKHPELATLLDALSAKLDNASMTEMNYQVDIGQQP
EEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECCCCC
VDKVAADFLRSHGLI
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10216873; 9384377 [H]