Definition Ralstonia eutropha JMP134 chromosome 1, complete sequence.
Accession NC_007347
Length 3,806,533

Click here to switch to the map view.

The map label for this gene is 73542123

Identifier: 73542123

GI number: 73542123

Start: 2672620

End: 2673570

Strand: Direct

Name: 73542123

Synonym: Reut_A2437

Alternate gene names: NA

Gene position: 2672620-2673570 (Clockwise)

Preceding gene: 73542122

Following gene: 73542124

Centisome position: 70.21

GC content: 64.77

Gene sequence:

>951_bases
ATGACAGACAAGAACTATCCACGCGATCTCATCGGCTACGGTGCCCGGCCGCCGCACGCACGCTGGCCCGGCGGCGCGCG
CGTTGCACTGCAGTTCGTCCTCAACTACGAAGAAGGCGGCGAGAACTGCGTCCTGCATGGCGATGCCGCGTCCGAGCAGT
TCCTCTCCGAAATCGTCGGCGCGGCGGCTTATCCCGACCGCCACATGAGCATGGAGGGCATCTACGAATACGGCTCGCGC
GCGGGCGTCTGGCGCATCCTGCGCGAGTTCGAGAAGCGCGGCCTGCCGCTGACCATCTTCGGCGTGTCGATGGCGCTGCA
GCGCCATCCGGAACTCACGCGCGCGTTTGTCGAGCTGGGCCATGAGATTGCCTGCCACGGCTGGCGCTGGATCCACTACC
AGAACATCGACGAAGCCACCGAGCGCGAGCACATGCGCATCGGCATGGACATCATCAAGGAGTTGACCGGCTCGATGCCG
CTCGGCTGGTACACGGGCCGCGACAGTCCCAACACGCGCCGCCTTGTGGTCGAGCACGGCGGCTTGCTGTACGACTCGGA
CTACTACGGCGATGACCTGCCCTTCTGGACCGAGGTCGAAGTCACCGGCGGCGGGAAGAAGCCCCACCTGGTGGTGCCTT
ACACGCTTGATTCCAACGACATGCGCTTTGCCACGCCGCAAGGCTTCAACACGGGCGAGCAGTTCTTCCAGTACCTGAAG
GACGCGTTCGACGTGCTGTACGAAGAAGGCGACCCCAGCGGCCTGGACCAGCCCAAGATGCTGTCGATCGGCATGCATTG
CCGCCTGCTCGGCCGGCCGGGGCGCTTCCGTGCGCTGCAGCGCTTCCTCGACTACGTGCAGGGCCACGACAAGGTATGGA
TCAGCCGCCGCGTCGATATCGCCCGCCACTGGATCGAGACCCATCCCTACACTCCGCGCAACAAAGCATGA

Upstream 100 bases:

>100_bases
GCGCAACGCCGCCGCGAACACGCACGGCACGGAGTAACCGCGGTTCCCGGCAGCCTCCTCGCAAGACGGCGCTGCCGGTG
CCCTGAAGCAGAAACGAACC

Downstream 100 bases:

>100_bases
GCCAGACCTACACCATCGCCCAACTCAACGCCATGCCCACTGCCGAATTCGTGCAGGTGCTGGGTGGCCTGTATGAACAC
TCGCCGTGGTTCGCGGAAAC

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: Urate Catabolism Protein; Polysaccharide Deacetylase Family Protein; Chitin Deacetylase; Xylanase/Chitin Deacetylase; Polysaccharide Deacetylase Family; Chitooligosaccharide Deacetylase; Chitooligosaccharide Deacetylase Protein; Polysaccharide Deacetylase Protein Pda4B; Carbohydrate Esterase Family 4 Domain Protein; Chitinase; Deacetylase Protein; Allantoinase; Uricase; Hydrolase; Deacetylase

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MTDKNYPRDLIGYGARPPHARWPGGARVALQFVLNYEEGGENCVLHGDAASEQFLSEIVGAAAYPDRHMSMEGIYEYGSR
AGVWRILREFEKRGLPLTIFGVSMALQRHPELTRAFVELGHEIACHGWRWIHYQNIDEATEREHMRIGMDIIKELTGSMP
LGWYTGRDSPNTRRLVVEHGGLLYDSDYYGDDLPFWTEVEVTGGGKKPHLVVPYTLDSNDMRFATPQGFNTGEQFFQYLK
DAFDVLYEEGDPSGLDQPKMLSIGMHCRLLGRPGRFRALQRFLDYVQGHDKVWISRRVDIARHWIETHPYTPRNKA

Sequences:

>Translated_316_residues
MTDKNYPRDLIGYGARPPHARWPGGARVALQFVLNYEEGGENCVLHGDAASEQFLSEIVGAAAYPDRHMSMEGIYEYGSR
AGVWRILREFEKRGLPLTIFGVSMALQRHPELTRAFVELGHEIACHGWRWIHYQNIDEATEREHMRIGMDIIKELTGSMP
LGWYTGRDSPNTRRLVVEHGGLLYDSDYYGDDLPFWTEVEVTGGGKKPHLVVPYTLDSNDMRFATPQGFNTGEQFFQYLK
DAFDVLYEEGDPSGLDQPKMLSIGMHCRLLGRPGRFRALQRFLDYVQGHDKVWISRRVDIARHWIETHPYTPRNKA
>Mature_315_residues
TDKNYPRDLIGYGARPPHARWPGGARVALQFVLNYEEGGENCVLHGDAASEQFLSEIVGAAAYPDRHMSMEGIYEYGSRA
GVWRILREFEKRGLPLTIFGVSMALQRHPELTRAFVELGHEIACHGWRWIHYQNIDEATEREHMRIGMDIIKELTGSMPL
GWYTGRDSPNTRRLVVEHGGLLYDSDYYGDDLPFWTEVEVTGGGKKPHLVVPYTLDSNDMRFATPQGFNTGEQFFQYLKD
AFDVLYEEGDPSGLDQPKMLSIGMHCRLLGRPGRFRALQRFLDYVQGHDKVWISRRVDIARHWIETHPYTPRNKA

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36289; Mature: 36158

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDKNYPRDLIGYGARPPHARWPGGARVALQFVLNYEEGGENCVLHGDAASEQFLSEIVG
CCCCCCCHHHHCCCCCCCCCCCCCCHHEEEEEEEECCCCCCEEEEECCHHHHHHHHHHHH
AAAYPDRHMSMEGIYEYGSRAGVWRILREFEKRGLPLTIFGVSMALQRHPELTRAFVELG
HHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHCHHHHHHHHHHC
HEIACHGWRWIHYQNIDEATEREHMRIGMDIIKELTGSMPLGWYTGRDSPNTRRLVVEHG
CCEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEEECC
GLLYDSDYYGDDLPFWTEVEVTGGGKKPHLVVPYTLDSNDMRFATPQGFNTGEQFFQYLK
CEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCEEECCCCCCCHHHHHHHHH
DAFDVLYEEGDPSGLDQPKMLSIGMHCRLLGRPGRFRALQRFLDYVQGHDKVWISRRVDI
HHHHHHHCCCCCCCCCCCCEEEECCEEEEECCCHHHHHHHHHHHHHCCCCEEEEHHHHHH
ARHWIETHPYTPRNKA
HHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TDKNYPRDLIGYGARPPHARWPGGARVALQFVLNYEEGGENCVLHGDAASEQFLSEIVG
CCCCCCHHHHCCCCCCCCCCCCCCHHEEEEEEEECCCCCCEEEEECCHHHHHHHHHHHH
AAAYPDRHMSMEGIYEYGSRAGVWRILREFEKRGLPLTIFGVSMALQRHPELTRAFVELG
HHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHCHHHHHHHHHHC
HEIACHGWRWIHYQNIDEATEREHMRIGMDIIKELTGSMPLGWYTGRDSPNTRRLVVEHG
CCEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEEECC
GLLYDSDYYGDDLPFWTEVEVTGGGKKPHLVVPYTLDSNDMRFATPQGFNTGEQFFQYLK
CEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCEEECCCCCCCHHHHHHHHH
DAFDVLYEEGDPSGLDQPKMLSIGMHCRLLGRPGRFRALQRFLDYVQGHDKVWISRRVDI
HHHHHHHCCCCCCCCCCCCEEEECCEEEEECCCHHHHHHHHHHHHHCCCCEEEEHHHHHH
ARHWIETHPYTPRNKA
HHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA