Click here to switch to the map view.

The map label for this gene is cvpA [H]

Identifier: 73541986

GI number: 73541986

Start: 2537161

End: 2537676

Strand: Reverse

Name: cvpA [H]

Synonym: Reut_A2300

Alternate gene names: 73541986

Gene position: 2537676-2537161 (Counterclockwise)

Preceding gene: 73541987

Following gene: 73541985

Centisome position: 66.67

GC content: 66.47

Gene sequence:

>516_bases
ATGCGGCCGCCTGCAACGATGCAGCCGACTTTCTTCGACTACGCTGTCGTCTTCATCCTGCTTGCTTCCGGCCTGATCGG
CGTGCTGCGCGGACTGGTCCGCGAGGTGCTGTCGCTGATCGGCTGGGTGGTGGCGTTCTGGGTTGCCTACCGGTTTGGTG
GCGTGGCCGCCGGATGGATGCCGGAATCGCTGCCCGGCGGCGAGATCGCGCGCCACGCGCTGGGCTTCGTGACCTTGCTG
ATCGGCACGGTGATCGGCGCGGCGCTGGCGGGCACGGTGGTCGGCCAGCTGCTGGAAAGCACCGGCCTGAAGCCGGCGGA
CCGCGGACTCGGCCTGGTGTTCGGCCTGCTGCGCGGCGCGCTGATCGTGATGCTGCTGGTCACGCTGGCCGGACTGACGA
AATTGCCGGAAGAGGAATTCTGGCGCGACGCGTTGAGCCGCCCCTATGTGATGCAGGCTATGGAATCGCTGAAACCATGG
CTGCCACCGGAGCTGGCGAAGTACGTCAAGACATGA

Upstream 100 bases:

>100_bases
CCTTCAACGACCGTGATGCCGCCGACGCCGCCGACAAGCGCGTACGCGCGACCGGGCTCGCGTCGAAGGTGGTGGAACAG
TAAGCCTGCGTGGCCGCGCG

Downstream 100 bases:

>100_bases
CACTGAGGCCCGGCACCGATGCCTGGCCGGTACGAAACGCAGGCCCTGTCCTCAGGACCGGGCTGCGCCCCTGATTCAAA
GCCTTTCCTGGGAGCATGGC

Product: colicin V production protein

Products: NA

Alternate protein names: Protein dedE; Pur regulon 18 kDa protein [H]

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MRPPATMQPTFFDYAVVFILLASGLIGVLRGLVREVLSLIGWVVAFWVAYRFGGVAAGWMPESLPGGEIARHALGFVTLL
IGTVIGAALAGTVVGQLLESTGLKPADRGLGLVFGLLRGALIVMLLVTLAGLTKLPEEEFWRDALSRPYVMQAMESLKPW
LPPELAKYVKT

Sequences:

>Translated_171_residues
MRPPATMQPTFFDYAVVFILLASGLIGVLRGLVREVLSLIGWVVAFWVAYRFGGVAAGWMPESLPGGEIARHALGFVTLL
IGTVIGAALAGTVVGQLLESTGLKPADRGLGLVFGLLRGALIVMLLVTLAGLTKLPEEEFWRDALSRPYVMQAMESLKPW
LPPELAKYVKT
>Mature_171_residues
MRPPATMQPTFFDYAVVFILLASGLIGVLRGLVREVLSLIGWVVAFWVAYRFGGVAAGWMPESLPGGEIARHALGFVTLL
IGTVIGAALAGTVVGQLLESTGLKPADRGLGLVFGLLRGALIVMLLVTLAGLTKLPEEEFWRDALSRPYVMQAMESLKPW
LPPELAKYVKT

Specific function: Required for colicin V production from plasmid IncFI ColV3-K30 [H]

COG id: COG1286

COG function: function code R; Uncharacterized membrane protein, required for colicin V production

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788652, Length=133, Percent_Identity=38.3458646616541, Blast_Score=87, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003825 [H]

Pfam domain/function: PF02674 Colicin_V [H]

EC number: NA

Molecular weight: Translated: 18421; Mature: 18421

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS01307 MOTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPPATMQPTFFDYAVVFILLASGLIGVLRGLVREVLSLIGWVVAFWVAYRFGGVAAGWM
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC
PESLPGGEIARHALGFVTLLIGTVIGAALAGTVVGQLLESTGLKPADRGLGLVFGLLRGA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LIVMLLVTLAGLTKLPEEEFWRDALSRPYVMQAMESLKPWLPPELAKYVKT
HHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHCC
>Mature Secondary Structure
MRPPATMQPTFFDYAVVFILLASGLIGVLRGLVREVLSLIGWVVAFWVAYRFGGVAAGWM
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC
PESLPGGEIARHALGFVTLLIGTVIGAALAGTVVGQLLESTGLKPADRGLGLVFGLLRGA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LIVMLLVTLAGLTKLPEEEFWRDALSRPYVMQAMESLKPWLPPELAKYVKT
HHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3040734; 2991286; 9205837; 9278503; 2542219 [H]