| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is yjcG [C]
Identifier: 73541915
GI number: 73541915
Start: 2457409
End: 2459460
Strand: Reverse
Name: yjcG [C]
Synonym: Reut_A2228
Alternate gene names: 73541915
Gene position: 2459460-2457409 (Counterclockwise)
Preceding gene: 73541916
Following gene: 73541914
Centisome position: 64.61
GC content: 63.01
Gene sequence:
>2052_bases ATGCCCGACGCCCAGTCGCGTTTCCGCCGCCGGCTGATGTTGTACTACGGCCTGTTCACGCTGGGTCTGTTCGGCTTCGT CGGCATGATGGGGCTGCTGGAGAAATCCAATGCCGATGCGCTGTGGCTCGGCTATGTCTTTCTCTTCGTCACCATCGCGA TCTACGCCTGTATCGGGCTGATCTGCCGTACGTCCGACCTCAACGAATACTACGTCGCCGCGCGGCGCGTGCCGGCGATG TTCAATGGCATGGCGATCGCGGCGGACTGGATGAGCGCCGCGTCGTTCATCGGCCTGGCCGGCATTCTGTTCGCTTCCGG CTATGAGGGGCTGGCGTATGTGATGGGATGGACCGGCGGCTATTGCCTGGTGGCGTTCCTGCTCGCGCCATACCTGCGCA AGTACGGCGGCTACACCATTCCCGATTTTCTCGCGGCACGCTATGGCAACGGCAAGCCGGGCGGCAACCTCCCTGTGCGC GCCATTGCGGTGCTTGCGGCATCGTTGTGTTCGTTTGTCTATCTGGTCGCGCAGATCCAGGGGGTGGGCCTTGTCGTGAC ACGCTTCATCGGCGTCGAGTTCGCGGTCGGCATCTTCTTCGGGCTGGCCGGCATCCTGGTTTGTTCGTTCCTGGGCGGCA TGCGCGCCGTCACGTGGACCCAGGTCGCGCAGTACATCATGATGATCGTCGCGTTCCTGGTAACGGTCTCGATGATTGCG TGGAAGCATCATCATGAAGTCGTGCCGCAACTGAGCTACGGGCCGCTGCTTTCGCAGCTGGACCAGCGCGAACGGCAGCT TGAGCGCGAACCGGCCGAGTTGGCCGTGCGCGATTTCTACCGGCAGCAGGCCATCCAGATGCAGGAGCGCATCGCCCGTC TGCCCCAGTCGTTTGCCGAAGAACGCGACGCGCTCGACGTGCGCCTGCGCGACTTGCGCGCTCGCAATGCGCCGCTGCGG GAAATCAAGGCATTGGAGCGAGAACGGATCGAGTTCCCCGCCGACGCGGCTGCCGCGCAACTGCAGTGGAACCAGATGCG TGAAGATGCGCTCGCACGCAGCAAGCCTTCCACGCCATCGACGGAGCCTTATCCTTCGGCCTCCGAGCAGGAGCGTGGCA CCAAGCGCCTGAATTTCGTGCTGCTGGTGTTCTGCCTGATGGTGGGGACCGCCAGCCTCCCGCACATCCTCACGCGCCTG TACACAACACCATCGGTGAAGGAAACGCGCAACTCCGTCGCGTGGGCGCTGTTTTGTATCGCCTTGCTTTACGTGTCGGC CCCCACGCTGGCGGCGCTGGTCAAGTACGAATTCTTCCAGCACGTGGTCGGCACGCCTTACGCTGAACTGCCGCAGTGGG TCGTGCAGTGGCGCAAGGTCGATCCACCGGTGTTCGCGCTGCGTGACGTCAACGCCGATGGCATCGTGCAGTGGGCCGAA ATCCTGTTGCAACCCGACATGATCGTGCTGGCCGCACCTGAAATTGCGGGGTTGCCTTACGTAATATCCGGACTGATCGC CGCCGGCGCGCTGGCGGCTGCACTATCGACGGCGGACGGCCTGCTGTTGACCATCGCCAATGCGCTGTCGCACGATGTCT TCTATCACATGGTCGACCGCCAGGCGAGCCACCAGCGGCGCGTAACGACGGCAAAGATCGTACTGCTCGGCGTAGCGCTG TTCGCCTCGTACGTCACATCGCTGCGTCCCGGCAACATCCTGTTCCTGGTGGGCGCGGCCTTCTCGCTGGCGGCATCAAG CTTCTTTCCGGTGCTGGTGCTCGGCATCTTCTGGCGCCGCACGACGGCCGCTGGCGCGGTCGCGGGGATGGCGGCGGGCT TGGGCATTTCGGTCTACTACATCTTCGTCAACTATCCTTTCTTCACGCGGATGACGGGTATCTTTGGTGACCGGTGGTTT GGCGTCGATCCCATCGCGTCAGGTGCCTTTGGCGTTCCTGCGGGTTTCGCTGCAGCCATCCTGGTCAGTCTGGTCACACC GAGGAATGCGCCTGTCATCAACAGGCTGGTGAACTACTTGCGGAAGGGGTAG
Upstream 100 bases:
>100_bases GGTCCATTCGGTAACGGCTCGTCCGACAGAACCCGCCGCCGCGTGAATCGCGCCGGCGGGTTCTTTACTCTAGATTTCCC TCACAGCCAGATCCTTGCCT
Downstream 100 bases:
>100_bases GGGGTGGCCAATGAAACACTGGACGCGTCGCCGCGCTCTGCTATAATCGCGGACTTCCCGGAGAGATGGATGAGTGGTTT AAGTCGCACGCCTGGAAAGC
Product: Na+/solute symporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 683; Mature: 682
Protein sequence:
>683_residues MPDAQSRFRRRLMLYYGLFTLGLFGFVGMMGLLEKSNADALWLGYVFLFVTIAIYACIGLICRTSDLNEYYVAARRVPAM FNGMAIAADWMSAASFIGLAGILFASGYEGLAYVMGWTGGYCLVAFLLAPYLRKYGGYTIPDFLAARYGNGKPGGNLPVR AIAVLAASLCSFVYLVAQIQGVGLVVTRFIGVEFAVGIFFGLAGILVCSFLGGMRAVTWTQVAQYIMMIVAFLVTVSMIA WKHHHEVVPQLSYGPLLSQLDQRERQLEREPAELAVRDFYRQQAIQMQERIARLPQSFAEERDALDVRLRDLRARNAPLR EIKALERERIEFPADAAAAQLQWNQMREDALARSKPSTPSTEPYPSASEQERGTKRLNFVLLVFCLMVGTASLPHILTRL YTTPSVKETRNSVAWALFCIALLYVSAPTLAALVKYEFFQHVVGTPYAELPQWVVQWRKVDPPVFALRDVNADGIVQWAE ILLQPDMIVLAAPEIAGLPYVISGLIAAGALAAALSTADGLLLTIANALSHDVFYHMVDRQASHQRRVTTAKIVLLGVAL FASYVTSLRPGNILFLVGAAFSLAASSFFPVLVLGIFWRRTTAAGAVAGMAAGLGISVYYIFVNYPFFTRMTGIFGDRWF GVDPIASGAFGVPAGFAAAILVSLVTPRNAPVINRLVNYLRKG
Sequences:
>Translated_683_residues MPDAQSRFRRRLMLYYGLFTLGLFGFVGMMGLLEKSNADALWLGYVFLFVTIAIYACIGLICRTSDLNEYYVAARRVPAM FNGMAIAADWMSAASFIGLAGILFASGYEGLAYVMGWTGGYCLVAFLLAPYLRKYGGYTIPDFLAARYGNGKPGGNLPVR AIAVLAASLCSFVYLVAQIQGVGLVVTRFIGVEFAVGIFFGLAGILVCSFLGGMRAVTWTQVAQYIMMIVAFLVTVSMIA WKHHHEVVPQLSYGPLLSQLDQRERQLEREPAELAVRDFYRQQAIQMQERIARLPQSFAEERDALDVRLRDLRARNAPLR EIKALERERIEFPADAAAAQLQWNQMREDALARSKPSTPSTEPYPSASEQERGTKRLNFVLLVFCLMVGTASLPHILTRL YTTPSVKETRNSVAWALFCIALLYVSAPTLAALVKYEFFQHVVGTPYAELPQWVVQWRKVDPPVFALRDVNADGIVQWAE ILLQPDMIVLAAPEIAGLPYVISGLIAAGALAAALSTADGLLLTIANALSHDVFYHMVDRQASHQRRVTTAKIVLLGVAL FASYVTSLRPGNILFLVGAAFSLAASSFFPVLVLGIFWRRTTAAGAVAGMAAGLGISVYYIFVNYPFFTRMTGIFGDRWF GVDPIASGAFGVPAGFAAAILVSLVTPRNAPVINRLVNYLRKG >Mature_682_residues PDAQSRFRRRLMLYYGLFTLGLFGFVGMMGLLEKSNADALWLGYVFLFVTIAIYACIGLICRTSDLNEYYVAARRVPAMF NGMAIAADWMSAASFIGLAGILFASGYEGLAYVMGWTGGYCLVAFLLAPYLRKYGGYTIPDFLAARYGNGKPGGNLPVRA IAVLAASLCSFVYLVAQIQGVGLVVTRFIGVEFAVGIFFGLAGILVCSFLGGMRAVTWTQVAQYIMMIVAFLVTVSMIAW KHHHEVVPQLSYGPLLSQLDQRERQLEREPAELAVRDFYRQQAIQMQERIARLPQSFAEERDALDVRLRDLRARNAPLRE IKALERERIEFPADAAAAQLQWNQMREDALARSKPSTPSTEPYPSASEQERGTKRLNFVLLVFCLMVGTASLPHILTRLY TTPSVKETRNSVAWALFCIALLYVSAPTLAALVKYEFFQHVVGTPYAELPQWVVQWRKVDPPVFALRDVNADGIVQWAEI LLQPDMIVLAAPEIAGLPYVISGLIAAGALAAALSTADGLLLTIANALSHDVFYHMVDRQASHQRRVTTAKIVLLGVALF ASYVTSLRPGNILFLVGAAFSLAASSFFPVLVLGIFWRRTTAAGAVAGMAAGLGISVYYIFVNYPFFTRMTGIFGDRWFG VDPIASGAFGVPAGFAAAILVSLVTPRNAPVINRLVNYLRKG
Specific function: Unknown
COG id: COG4147
COG function: function code R; Predicted symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Escherichia coli, GI1790503, Length=169, Percent_Identity=33.1360946745562, Blast_Score=102, Evalue=8e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001734 - InterPro: IPR019899 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 75015; Mature: 74884
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: PS00018 EF_HAND_1 ; PS50283 NA_SOLUT_SYMP_3 ; PS00267 TACHYKININ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDAQSRFRRRLMLYYGLFTLGLFGFVGMMGLLEKSNADALWLGYVFLFVTIAIYACIGL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH ICRTSDLNEYYVAARRVPAMFNGMAIAADWMSAASFIGLAGILFASGYEGLAYVMGWTGG HHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCH YCLVAFLLAPYLRKYGGYTIPDFLAARYGNGKPGGNLPVRAIAVLAASLCSFVYLVAQIQ HHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC GVGLVVTRFIGVEFAVGIFFGLAGILVCSFLGGMRAVTWTQVAQYIMMIVAFLVTVSMIA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH WKHHHEVVPQLSYGPLLSQLDQRERQLEREPAELAVRDFYRQQAIQMQERIARLPQSFAE HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERDALDVRLRDLRARNAPLREIKALERERIEFPADAAAAQLQWNQMREDALARSKPSTPS HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC TEPYPSASEQERGTKRLNFVLLVFCLMVGTASLPHILTRLYTTPSVKETRNSVAWALFCI CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ALLYVSAPTLAALVKYEFFQHVVGTPYAELPQWVVQWRKVDPPVFALRDVNADGIVQWAE HHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHH ILLQPDMIVLAAPEIAGLPYVISGLIAAGALAAALSTADGLLLTIANALSHDVFYHMVDR HHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH QASHQRRVTTAKIVLLGVALFASYVTSLRPGNILFLVGAAFSLAASSFFPVLVLGIFWRR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH TTAAGAVAGMAAGLGISVYYIFVNYPFFTRMTGIFGDRWFGVDPIASGAFGVPAGFAAAI HHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH LVSLVTPRNAPVINRLVNYLRKG HHHHHCCCCCHHHHHHHHHHHCC >Mature Secondary Structure PDAQSRFRRRLMLYYGLFTLGLFGFVGMMGLLEKSNADALWLGYVFLFVTIAIYACIGL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH ICRTSDLNEYYVAARRVPAMFNGMAIAADWMSAASFIGLAGILFASGYEGLAYVMGWTGG HHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCH YCLVAFLLAPYLRKYGGYTIPDFLAARYGNGKPGGNLPVRAIAVLAASLCSFVYLVAQIQ HHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC GVGLVVTRFIGVEFAVGIFFGLAGILVCSFLGGMRAVTWTQVAQYIMMIVAFLVTVSMIA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH WKHHHEVVPQLSYGPLLSQLDQRERQLEREPAELAVRDFYRQQAIQMQERIARLPQSFAE HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERDALDVRLRDLRARNAPLREIKALERERIEFPADAAAAQLQWNQMREDALARSKPSTPS HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC TEPYPSASEQERGTKRLNFVLLVFCLMVGTASLPHILTRLYTTPSVKETRNSVAWALFCI CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ALLYVSAPTLAALVKYEFFQHVVGTPYAELPQWVVQWRKVDPPVFALRDVNADGIVQWAE HHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHH ILLQPDMIVLAAPEIAGLPYVISGLIAAGALAAALSTADGLLLTIANALSHDVFYHMVDR HHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH QASHQRRVTTAKIVLLGVALFASYVTSLRPGNILFLVGAAFSLAASSFFPVLVLGIFWRR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH TTAAGAVAGMAAGLGISVYYIFVNYPFFTRMTGIFGDRWFGVDPIASGAFGVPAGFAAAI HHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH LVSLVTPRNAPVINRLVNYLRKG HHHHHCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1356967 [H]