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The map label for this gene is yfiB [H]

Identifier: 73541910

GI number: 73541910

Start: 2454051

End: 2454611

Strand: Direct

Name: yfiB [H]

Synonym: Reut_A2223

Alternate gene names: 73541910

Gene position: 2454051-2454611 (Clockwise)

Preceding gene: 73541909

Following gene: 73541913

Centisome position: 64.47

GC content: 67.74

Gene sequence:

>561_bases
ATGACGCCTGCCTACCGTTCCGCTGCGGCAAGCCAGTTGCCGCATACCGGCCCGCGGGATACCCGCGGGCTGGCGGCGGG
CGCACTGCTGGCGGCTCTGGCAGCGATGGTTCTGGCTTTGTCGGGCTGCAAGACCGCCCCTCCGGCCCAGGGCGGCCTGA
CACCGGCACAGGTAGCCGTGCTGCAGCAGGAAGGCTTTACGGAGACAGACGTCGGCTGGGAACTCGGCCGTCCGCTCAAA
GTCCTGTTTGGCTTCGACGAAGATGCCATCCCTCCCGATCGGATTGCCGACATCCGGCGCCTCGGCGGCGTGCTGCTAGG
CGTGGGCATCGACCATGTACGCGTGGATGGCCACACCGATCACACCGGCAGCACCGAATACAACCTGCGGCTTTCGCTGC
GGCGCGCGGAAGCCGTAGCCAGGGTACTGGTCACTGCCGGTTTCGAACCGGCGAACATTGAACTGCGCGGCATGGGCAAG
GGCCGGCCGGTGGCAGACAACCGCACCGCCGCCGGTCGCGCGGAGAATCGGCGCGCCTCCATCGTGGTGACGGTGGAGTA
A

Upstream 100 bases:

>100_bases
TGCTGCATGCGGCAGACGCGGCCATGTACGGCGCCAAGCGCCGATGCGGCGGGACCTGGCAGAGTGCCGAGCCACGCCTG
GAGGCCAGCCGGGACCAGCG

Downstream 100 bases:

>100_bases
CCGCGCGGGACACATCGCGGCAACGACTGCCGGCAACGCCGACAGCCTCAGTCGCCGAAGGGATTGGACGCGCGGTTCTC
GATGGAGTCAGACAGGTCGA

Product: OmpA/MotB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MTPAYRSAAASQLPHTGPRDTRGLAAGALLAALAAMVLALSGCKTAPPAQGGLTPAQVAVLQQEGFTETDVGWELGRPLK
VLFGFDEDAIPPDRIADIRRLGGVLLGVGIDHVRVDGHTDHTGSTEYNLRLSLRRAEAVARVLVTAGFEPANIELRGMGK
GRPVADNRTAAGRAENRRASIVVTVE

Sequences:

>Translated_186_residues
MTPAYRSAAASQLPHTGPRDTRGLAAGALLAALAAMVLALSGCKTAPPAQGGLTPAQVAVLQQEGFTETDVGWELGRPLK
VLFGFDEDAIPPDRIADIRRLGGVLLGVGIDHVRVDGHTDHTGSTEYNLRLSLRRAEAVARVLVTAGFEPANIELRGMGK
GRPVADNRTAAGRAENRRASIVVTVE
>Mature_185_residues
TPAYRSAAASQLPHTGPRDTRGLAAGALLAALAAMVLALSGCKTAPPAQGGLTPAQVAVLQQEGFTETDVGWELGRPLKV
LFGFDEDAIPPDRIADIRRLGGVLLGVGIDHVRVDGHTDHTGSTEYNLRLSLRRAEAVARVLVTAGFEPANIELRGMGKG
RPVADNRTAAGRAENRRASIVVTVE

Specific function: Unknown

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1788957, Length=158, Percent_Identity=41.1392405063291, Blast_Score=123, Evalue=7e-30,
Organism=Escherichia coli, GI48994946, Length=110, Percent_Identity=35.4545454545455, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 19522; Mature: 19390

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPAYRSAAASQLPHTGPRDTRGLAAGALLAALAAMVLALSGCKTAPPAQGGLTPAQVAV
CCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
LQQEGFTETDVGWELGRPLKVLFGFDEDAIPPDRIADIRRLGGVLLGVGIDHVRVDGHTD
HHHCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCEEEECCCCEEEECCCCC
HTGSTEYNLRLSLRRAEAVARVLVTAGFEPANIELRGMGKGRPVADNRTAAGRAENRRAS
CCCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEE
IVVTVE
EEEEEC
>Mature Secondary Structure 
TPAYRSAAASQLPHTGPRDTRGLAAGALLAALAAMVLALSGCKTAPPAQGGLTPAQVAV
CCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
LQQEGFTETDVGWELGRPLKVLFGFDEDAIPPDRIADIRRLGGVLLGVGIDHVRVDGHTD
HHHCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCEEEECCCCEEEECCCCC
HTGSTEYNLRLSLRRAEAVARVLVTAGFEPANIELRGMGKGRPVADNRTAAGRAENRRAS
CCCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEE
IVVTVE
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 6357787; 9205837; 9278503; 6298574 [H]