| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is phaA [H]
Identifier: 73541826
GI number: 73541826
Start: 2357468
End: 2359207
Strand: Reverse
Name: phaA [H]
Synonym: Reut_A2138
Alternate gene names: 73541826
Gene position: 2359207-2357468 (Counterclockwise)
Preceding gene: 73541827
Following gene: 73541825
Centisome position: 61.98
GC content: 65.34
Gene sequence:
>1740_bases ATGACAACAGCCGTGGGTACGAGAACGCTGGCGAAGACGACAAAGAAGGCGAAGAAGCCGGCAGCCAGTGCTGTCGCTCC GGAGGCAATTGTTGACAGCGCGCCGGCCATGACGGGACCGAACCCGTTCGTGGGGCTGCGCCCCGAAGATATGGTCAGCA CCGCGCAGCAGATCGGCGCGCAGTGCGTGCAGGAACCGACCTTGCTGCTGCAGCAGCAGACCAAGCTCGCGCAGGACCTG TTCGCGGTCGTGGACGGCTCGGCGCCGCCGCCGTGCACGCGTGACCGCCGCTTCGGCGATCCGGCATGGCAGGATAACCC GGTCTATCGCATGGCCCTGCAGGGATATCAGGCCTGGCGCGATGCGCTGACCGGCTTCGTCACCGGCTCGGTCATGGACG GTCGCAGCAAGGAACGCGCGCAGTACTTCACCGACCTGCTGATCGACGCCGTGGCGCCGACCAATACGCTACTGGGGAAT CCGGCTGCATTGCGGAAGACGTTCGAGTCGGGTGGTCTGAACCTGGTCAGCGGCCTGGTCAACCTGTTGACCGATACGCT GACGAACCAGGGCATGCCGTCCCAGGTGGACAAGAGCGCGTTCCGTATCGGCAAGGATCTGGCCGCCACGCCAGGCGCGG TGGTTTTCCGCAACGATGTCCTGGAGCTGATCCAGTACACGCCGACCACGGCAAACGTGCATGCCCGTCCGCAGCTCATC GTGCCGCCGCAGGTCAACAAGTTCTATGTGTTTGACCTGTCGCAGGGCAAGAGCATGGTCGAGTACCTGGTGCGCAATGA GATGCAGGTGTTCATGGTGAGCTGGCGCAATCCCACCACGTTGCACCGCGACTGGAACCTCGACACCTATGTCGGTGCGC TGATCGAAGCGATCCACGCGATCCGCGACATCACTGGCAGCCCCGACGTGAACCTGCATGGCGCGTGCTCGGGCGCGATG ACGATGTCCGCGCTCATGGGGTACTGCGCAGCGCGCGGCGAAAAGCTCGTGAATGCCGCCACGCTGATGGTGTCCGTGTT CGGCCTCGACTCGCAGTCCCAGCTCGGACTGTTTGCCACGCCGGAAGCCATCGATGCCGCGCGGCAGGGCAGCCAGGCGC GCGGTGTGCTGGATGGCGGGGAACTCGGGCGCGTGTTCGCCTGGATGCGGCCCAATGACCTGGTGTGGAACTACTGGGTC AACAACTACCTGCTGGGCAAGGCGCCGCCGGCGTTCGACATCCTCTACTGGAACAACGACACCACGCGCCTGCCCGCCGG CCTGCACGGCCAGTTGCTGGACATGCTGACGCTGAACCAGCTGTCGACACCGGGCGCGCTGCGCGTGCTTGGCCAGCCGA TCGACCTTTCGGCTGTTGATTGCGACAAGTATGTGCTTGCCGGCATGACCGACCACATCACGCCGTGGAAGGGCGTGTAC CGCTCGGTGCGCGCGTTCGGCGGCAAGACCGAGTTCGTGCTCAGCTCCAGCGGTCATGTGCAGAGCCTCATCAACCCGCC GGGAAATGCCAAGGCGAAGTTCTTCCTGAACGACGCGCAGATGGCGGACCCGGAAGCGTGGCTCGAGGGTGCCACGGTCA CCCCGTCGTCCTGGTGGGAGCACTGGAGCGAGTGGCTGAAAACGCGTTCTGGCCCCCTGAACGCCGCGCCGTCCCGCCTG GGCAGCGACCGCCATGCGCCATGCGCCGACGCGCCGGGACGCTATGTGACCGAGGCGTAA
Upstream 100 bases:
>100_bases ATCGAAGGCGAGGGCAAGCCCGCGCTGGTGGCTGAAGCGCTTGCGCTGCTGGTCGCCTGAGGATCGAACAAGGTACGAAC AAGAAGACGAGGGTAGTAGC
Downstream 100 bases:
>100_bases GCCCGGCCACCGATTTCTGTAACGCCAACTGTAATCTGTAAGGAGAGTAAAAAATGGAAGCCACCAATGCCGCAGCCGCT GCGTCCCGCAAGCTGTTCGA
Product: Alpha/beta hydrolase fold:Poly-beta-hydroxybutyrate polymerase, N-terminal
Products: NA
Alternate protein names: PHA polymerase 1; PHA synthase 1; Polyhydroxyalkanoic acid synthase 1 [H]
Number of amino acids: Translated: 579; Mature: 578
Protein sequence:
>579_residues MTTAVGTRTLAKTTKKAKKPAASAVAPEAIVDSAPAMTGPNPFVGLRPEDMVSTAQQIGAQCVQEPTLLLQQQTKLAQDL FAVVDGSAPPPCTRDRRFGDPAWQDNPVYRMALQGYQAWRDALTGFVTGSVMDGRSKERAQYFTDLLIDAVAPTNTLLGN PAALRKTFESGGLNLVSGLVNLLTDTLTNQGMPSQVDKSAFRIGKDLAATPGAVVFRNDVLELIQYTPTTANVHARPQLI VPPQVNKFYVFDLSQGKSMVEYLVRNEMQVFMVSWRNPTTLHRDWNLDTYVGALIEAIHAIRDITGSPDVNLHGACSGAM TMSALMGYCAARGEKLVNAATLMVSVFGLDSQSQLGLFATPEAIDAARQGSQARGVLDGGELGRVFAWMRPNDLVWNYWV NNYLLGKAPPAFDILYWNNDTTRLPAGLHGQLLDMLTLNQLSTPGALRVLGQPIDLSAVDCDKYVLAGMTDHITPWKGVY RSVRAFGGKTEFVLSSSGHVQSLINPPGNAKAKFFLNDAQMADPEAWLEGATVTPSSWWEHWSEWLKTRSGPLNAAPSRL GSDRHAPCADAPGRYVTEA
Sequences:
>Translated_579_residues MTTAVGTRTLAKTTKKAKKPAASAVAPEAIVDSAPAMTGPNPFVGLRPEDMVSTAQQIGAQCVQEPTLLLQQQTKLAQDL FAVVDGSAPPPCTRDRRFGDPAWQDNPVYRMALQGYQAWRDALTGFVTGSVMDGRSKERAQYFTDLLIDAVAPTNTLLGN PAALRKTFESGGLNLVSGLVNLLTDTLTNQGMPSQVDKSAFRIGKDLAATPGAVVFRNDVLELIQYTPTTANVHARPQLI VPPQVNKFYVFDLSQGKSMVEYLVRNEMQVFMVSWRNPTTLHRDWNLDTYVGALIEAIHAIRDITGSPDVNLHGACSGAM TMSALMGYCAARGEKLVNAATLMVSVFGLDSQSQLGLFATPEAIDAARQGSQARGVLDGGELGRVFAWMRPNDLVWNYWV NNYLLGKAPPAFDILYWNNDTTRLPAGLHGQLLDMLTLNQLSTPGALRVLGQPIDLSAVDCDKYVLAGMTDHITPWKGVY RSVRAFGGKTEFVLSSSGHVQSLINPPGNAKAKFFLNDAQMADPEAWLEGATVTPSSWWEHWSEWLKTRSGPLNAAPSRL GSDRHAPCADAPGRYVTEA >Mature_578_residues TTAVGTRTLAKTTKKAKKPAASAVAPEAIVDSAPAMTGPNPFVGLRPEDMVSTAQQIGAQCVQEPTLLLQQQTKLAQDLF AVVDGSAPPPCTRDRRFGDPAWQDNPVYRMALQGYQAWRDALTGFVTGSVMDGRSKERAQYFTDLLIDAVAPTNTLLGNP AALRKTFESGGLNLVSGLVNLLTDTLTNQGMPSQVDKSAFRIGKDLAATPGAVVFRNDVLELIQYTPTTANVHARPQLIV PPQVNKFYVFDLSQGKSMVEYLVRNEMQVFMVSWRNPTTLHRDWNLDTYVGALIEAIHAIRDITGSPDVNLHGACSGAMT MSALMGYCAARGEKLVNAATLMVSVFGLDSQSQLGLFATPEAIDAARQGSQARGVLDGGELGRVFAWMRPNDLVWNYWVN NYLLGKAPPAFDILYWNNDTTRLPAGLHGQLLDMLTLNQLSTPGALRVLGQPIDLSAVDCDKYVLAGMTDHITPWKGVYR SVRAFGGKTEFVLSSSGHVQSLINPPGNAKAKFFLNDAQMADPEAWLEGATVTPSSWWEHWSEWLKTRSGPLNAAPSRLG SDRHAPCADAPGRYVTEA
Specific function: P.oleovorans accumulates poly(3-hydroxyalkanoates) after growth on medium chain length hydrocarbons. Large amounts of this polyester are synthesized when cells are grown under nitrogen- limiting conditions. When nitrogen is resupplied in the medium, the a
COG id: COG3243
COG function: function code I; Poly(3-hydroxyalkanoate) synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PHA/PHB synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR011287 - InterPro: IPR010941 [H]
Pfam domain/function: PF00561 Abhydrolase_1; PF07167 PhaC_N [H]
EC number: NA
Molecular weight: Translated: 62849; Mature: 62718
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAVGTRTLAKTTKKAKKPAASAVAPEAIVDSAPAMTGPNPFVGLRPEDMVSTAQQIGA CCCCCCHHHHHHHHHHHHCCHHHHCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH QCVQEPTLLLQQQTKLAQDLFAVVDGSAPPPCTRDRRFGDPAWQDNPVYRMALQGYQAWR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH DALTGFVTGSVMDGRSKERAQYFTDLLIDAVAPTNTLLGNPAALRKTFESGGLNLVSGLV HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHCCCHHHHHHHH NLLTDTLTNQGMPSQVDKSAFRIGKDLAATPGAVVFRNDVLELIQYTPTTANVHARPQLI HHHHHHHHCCCCCHHHHHHHHHHCCHHCCCCCCEEEHHHHHHHHHCCCCCCCCCCCCEEE VPPQVNKFYVFDLSQGKSMVEYLVRNEMQVFMVSWRNPTTLHRDWNLDTYVGALIEAIHA ECCCCCEEEEEECCCCHHHHHHHHHCCEEEEEEECCCCCEEEECCCHHHHHHHHHHHHHH IRDITGSPDVNLHGACSGAMTMSALMGYCAARGEKLVNAATLMVSVFGLDSQSQLGLFAT HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEEC PEAIDAARQGSQARGVLDGGELGRVFAWMRPNDLVWNYWVNNYLLGKAPPAFDILYWNND CHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCEEECCCCCCEEEEEECCC TTRLPAGLHGQLLDMLTLNQLSTPGALRVLGQPIDLSAVDCDKYVLAGMTDHITPWKGVY CCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCEECCCCHHHHHCCCCCCCCHHHHH RSVRAFGGKTEFVLSSSGHVQSLINPPGNAKAKFFLNDAQMADPEAWLEGATVTPSSWWE HHHHHCCCCEEEEEECCCCHHHHCCCCCCCEEEEEECCCCCCCHHHHHCCCCCCCHHHHH HWSEWLKTRSGPLNAAPSRLGSDRHAPCADAPGRYVTEA HHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTAVGTRTLAKTTKKAKKPAASAVAPEAIVDSAPAMTGPNPFVGLRPEDMVSTAQQIGA CCCCCHHHHHHHHHHHHCCHHHHCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH QCVQEPTLLLQQQTKLAQDLFAVVDGSAPPPCTRDRRFGDPAWQDNPVYRMALQGYQAWR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH DALTGFVTGSVMDGRSKERAQYFTDLLIDAVAPTNTLLGNPAALRKTFESGGLNLVSGLV HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHCCCHHHHHHHH NLLTDTLTNQGMPSQVDKSAFRIGKDLAATPGAVVFRNDVLELIQYTPTTANVHARPQLI HHHHHHHHCCCCCHHHHHHHHHHCCHHCCCCCCEEEHHHHHHHHHCCCCCCCCCCCCEEE VPPQVNKFYVFDLSQGKSMVEYLVRNEMQVFMVSWRNPTTLHRDWNLDTYVGALIEAIHA ECCCCCEEEEEECCCCHHHHHHHHHCCEEEEEEECCCCCEEEECCCHHHHHHHHHHHHHH IRDITGSPDVNLHGACSGAMTMSALMGYCAARGEKLVNAATLMVSVFGLDSQSQLGLFAT HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEEC PEAIDAARQGSQARGVLDGGELGRVFAWMRPNDLVWNYWVNNYLLGKAPPAFDILYWNND CHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCEEECCCCCCEEEEEECCC TTRLPAGLHGQLLDMLTLNQLSTPGALRVLGQPIDLSAVDCDKYVLAGMTDHITPWKGVY CCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCEECCCCHHHHHCCCCCCCCHHHHH RSVRAFGGKTEFVLSSSGHVQSLINPPGNAKAKFFLNDAQMADPEAWLEGATVTPSSWWE HHHHHCCCCEEEEEECCCCHHHHCCCCCCCEEEEEECCCCCCCHHHHHCCCCCCCHHHHH HWSEWLKTRSGPLNAAPSRLGSDRHAPCADAPGRYVTEA HHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1989978 [H]