| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is yheS [H]
Identifier: 73541619
GI number: 73541619
Start: 2117502
End: 2119433
Strand: Direct
Name: yheS [H]
Synonym: Reut_A1930
Alternate gene names: 73541619
Gene position: 2117502-2119433 (Clockwise)
Preceding gene: 73541608
Following gene: 73541624
Centisome position: 55.63
GC content: 66.56
Gene sequence:
>1932_bases GTGATCCGAATCGACCAGCTTGTCCTCCAGCGCGGCACCAAGGTGCTGTTCGACCACACCAGCGTGACGCTCAACCCGGG CGAGCGCGTGGGCCTCGTCGGCGCCAACGGCAGCGGCAAGTCCACGCTGTTCGCCATGCTGCGCGGCGAACTGCATGCGG ATGGCGGCGACGTGACGGTGCCTGCCCAATGGCGCATCGCGCATGTGGCGCAAGAGACGCCGGCGGTGGCGCGTAGCGCG GTCGAATACGTGATCGACGGCGATACACGCCTGCGAGAGATCGAAGCCGCCATTGCCGAGGCGCAGGCAGTCGGCGACGG CAGCGCGGAAGGCGAAGCGCACGCGGCCTTTGCCGACGCCGACGGCTACACCGCCCCGGCGCGCGCCGAGGCGCTGCTGT TGGGCCTCGGTTTCACGCTGCCGCAGGTGTCGCAGCCGGTATCGTCGTTCTCGGGCGGATGGCGCATGCGCCTGAACCTG GCCCAGGCCCTGATGTGCCCGTCGGACCTGCTGCTGCTCGATGAACCGACCAATCACCTGGACCTCGACGCCATCGTCTG GCTCGAAGACTGGCTCGCGCGCTACCCCGGCACGCTGGTCATGATTTCGCACGACCGTGAATTCCTGGACGCGATCTGCA ACGTCACGGTCCATATCGAGAATCAGCAGTTGCGCCGCTACGGCGGCAACTACACGCTGTTCGAGACGCTGCGCCTGCAG CAGATGGCGCAGCAGCAGGCGGCCTATACCCGCCAGCAAAAGGAAATCGCGCACCTGGAATCGTTCATCACGCGCTTCAA GGCCAAGGCGACCAAGGCGCGCCAGGCGCAAAGCCGCGTCAAGGCACTCGAGAAGATGGAACGGCTGGCGCCAGTGCACG TCGCCGCGGGCTTCGCCTTCGAATTCCGCGAGCCCGATGCGGCGCCGAACCCGATGATGGTGCTGGACGGCGTCGACTGC GGCTATGCCGAGGCCGATCCGCCGGCGACCATCCTGCACAAGCTGGCGCTGTCGATCCAGAACGGCCAGCGCATCGGCCT GCTCGGCGCCAACGGGCAGGGCAAGTCGACGCTGGTCAAGACGCTGGCCGGCACGCAGGATCCGCTGACCGGCACGCTGC GCCTGGGCAAGGGCCTGCAGATCGGCTACTTCGCCCAGCACCAGCTGGAAACGCTGCGTGACCACGAATCTCCGCTGCAG CACCTGGCGCGACTGGCGCCGGACACCCGCGAGCAGGAACTGCGCGATTTCCTCGGCAGCTTCAATTTCCGCGGCGATAT GGCCACCGCGCCGATCGAGCCGTTCTCGGGGGGCGAAAAAGCCCGCCTGGCGCTGTCGCTGATCGTCTGGCAGAAGCCCA ACCTGCTGCTGCTCGACGAACCGACCAACCACCTGGACCTCGACACGCGCGAGGCGCTGACCATGGCGCTGGCGCAGTTC GAAGGCACGCTGATCCTGGTTTCGCACGACCGTCACCTGCTGCGCGCTACGGCCGACCAGTTCATGCTGGTCGCCGATGG CACCATCAAACCGTTCGACGGCGACCTCGACGACTATCGCGACTGGCTGCTGCAGCAGGCCGCGGCCAAGCGCAACGCCG CCGTGGCCGCGCACCAGGGGGAAACCGGCGGCAACGCCGCAGCGGTCAACCGCAAGGACCAGCGCCGCGCCGAAGCGGAC GAGCGCCAGCGGCTGGCGCAACTGCGCAAGCCGCTGACCAAGGAACTGGAAAAGGTGGAAAAGCGCATGACGGTGCTGCA GACCGCCAAGGCCGAGATCGACCAGTTCATGGCCGATGAGACCAGCTATGCCGAGGCCAACAAGTCAAAGCTGATGGAGA TGCTCAAGCGCCAGGGCGAAGTCAACGGCGAACTGGAAACGCTCGAAGAGAAATGGCTGGAGCTGCAGGAGCAGATCGAA CAGATCGAGTGA
Upstream 100 bases:
>100_bases CTACAATGCCGCCCAGCGCCTCATCTCGGGCTGCTGTCCGCGCTTTCTCGCGCTTTTCCGCTGTTTTTTATCCCCGCTTA CCGACGCTCCTGCCTTACCC
Downstream 100 bases:
>100_bases AGGGGTTCGAGTCCGCTACCTCGTATCCACCCATCGAATGTCGTGGCTGCGAACAAAAACCGGCGCTCAAGGCGCCGGTT TTTCTATCCGATCAACGGAA
Product: ABC transporter related
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 643; Mature: 643
Protein sequence:
>643_residues MIRIDQLVLQRGTKVLFDHTSVTLNPGERVGLVGANGSGKSTLFAMLRGELHADGGDVTVPAQWRIAHVAQETPAVARSA VEYVIDGDTRLREIEAAIAEAQAVGDGSAEGEAHAAFADADGYTAPARAEALLLGLGFTLPQVSQPVSSFSGGWRMRLNL AQALMCPSDLLLLDEPTNHLDLDAIVWLEDWLARYPGTLVMISHDREFLDAICNVTVHIENQQLRRYGGNYTLFETLRLQ QMAQQQAAYTRQQKEIAHLESFITRFKAKATKARQAQSRVKALEKMERLAPVHVAAGFAFEFREPDAAPNPMMVLDGVDC GYAEADPPATILHKLALSIQNGQRIGLLGANGQGKSTLVKTLAGTQDPLTGTLRLGKGLQIGYFAQHQLETLRDHESPLQ HLARLAPDTREQELRDFLGSFNFRGDMATAPIEPFSGGEKARLALSLIVWQKPNLLLLDEPTNHLDLDTREALTMALAQF EGTLILVSHDRHLLRATADQFMLVADGTIKPFDGDLDDYRDWLLQQAAAKRNAAVAAHQGETGGNAAAVNRKDQRRAEAD ERQRLAQLRKPLTKELEKVEKRMTVLQTAKAEIDQFMADETSYAEANKSKLMEMLKRQGEVNGELETLEEKWLELQEQIE QIE
Sequences:
>Translated_643_residues MIRIDQLVLQRGTKVLFDHTSVTLNPGERVGLVGANGSGKSTLFAMLRGELHADGGDVTVPAQWRIAHVAQETPAVARSA VEYVIDGDTRLREIEAAIAEAQAVGDGSAEGEAHAAFADADGYTAPARAEALLLGLGFTLPQVSQPVSSFSGGWRMRLNL AQALMCPSDLLLLDEPTNHLDLDAIVWLEDWLARYPGTLVMISHDREFLDAICNVTVHIENQQLRRYGGNYTLFETLRLQ QMAQQQAAYTRQQKEIAHLESFITRFKAKATKARQAQSRVKALEKMERLAPVHVAAGFAFEFREPDAAPNPMMVLDGVDC GYAEADPPATILHKLALSIQNGQRIGLLGANGQGKSTLVKTLAGTQDPLTGTLRLGKGLQIGYFAQHQLETLRDHESPLQ HLARLAPDTREQELRDFLGSFNFRGDMATAPIEPFSGGEKARLALSLIVWQKPNLLLLDEPTNHLDLDTREALTMALAQF EGTLILVSHDRHLLRATADQFMLVADGTIKPFDGDLDDYRDWLLQQAAAKRNAAVAAHQGETGGNAAAVNRKDQRRAEAD ERQRLAQLRKPLTKELEKVEKRMTVLQTAKAEIDQFMADETSYAEANKSKLMEMLKRQGEVNGELETLEEKWLELQEQIE QIE >Mature_643_residues MIRIDQLVLQRGTKVLFDHTSVTLNPGERVGLVGANGSGKSTLFAMLRGELHADGGDVTVPAQWRIAHVAQETPAVARSA VEYVIDGDTRLREIEAAIAEAQAVGDGSAEGEAHAAFADADGYTAPARAEALLLGLGFTLPQVSQPVSSFSGGWRMRLNL AQALMCPSDLLLLDEPTNHLDLDAIVWLEDWLARYPGTLVMISHDREFLDAICNVTVHIENQQLRRYGGNYTLFETLRLQ QMAQQQAAYTRQQKEIAHLESFITRFKAKATKARQAQSRVKALEKMERLAPVHVAAGFAFEFREPDAAPNPMMVLDGVDC GYAEADPPATILHKLALSIQNGQRIGLLGANGQGKSTLVKTLAGTQDPLTGTLRLGKGLQIGYFAQHQLETLRDHESPLQ HLARLAPDTREQELRDFLGSFNFRGDMATAPIEPFSGGEKARLALSLIVWQKPNLLLLDEPTNHLDLDTREALTMALAQF EGTLILVSHDRHLLRATADQFMLVADGTIKPFDGDLDDYRDWLLQQAAAKRNAAVAAHQGETGGNAAAVNRKDQRRAEAD ERQRLAQLRKPLTKELEKVEKRMTVLQTAKAEIDQFMADETSYAEANKSKLMEMLKRQGEVNGELETLEEKWLELQEQIE QIE
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI148612853, Length=536, Percent_Identity=39.9253731343284, Blast_Score=372, Evalue=1e-103, Organism=Homo sapiens, GI10947137, Length=532, Percent_Identity=36.2781954887218, Blast_Score=324, Evalue=2e-88, Organism=Homo sapiens, GI27881506, Length=532, Percent_Identity=36.2781954887218, Blast_Score=323, Evalue=2e-88, Organism=Homo sapiens, GI69354671, Length=545, Percent_Identity=33.0275229357798, Blast_Score=260, Evalue=3e-69, Organism=Homo sapiens, GI10947135, Length=545, Percent_Identity=33.0275229357798, Blast_Score=260, Evalue=3e-69, Organism=Escherichia coli, GI1789751, Length=642, Percent_Identity=53.1152647975078, Blast_Score=685, Evalue=0.0, Organism=Escherichia coli, GI1787041, Length=528, Percent_Identity=35.4166666666667, Blast_Score=327, Evalue=2e-90, Organism=Escherichia coli, GI2367384, Length=525, Percent_Identity=29.1428571428571, Blast_Score=212, Evalue=5e-56, Organism=Escherichia coli, GI1787182, Length=601, Percent_Identity=29.6173044925125, Blast_Score=211, Evalue=1e-55, Organism=Escherichia coli, GI1788165, Length=180, Percent_Identity=33.3333333333333, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI1787164, Length=217, Percent_Identity=31.7972350230415, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI1788225, Length=209, Percent_Identity=25.3588516746411, Blast_Score=66, Evalue=6e-12, Organism=Escherichia coli, GI1787758, Length=190, Percent_Identity=25.7894736842105, Blast_Score=62, Evalue=8e-11, Organism=Caenorhabditis elegans, GI17553372, Length=538, Percent_Identity=37.1747211895911, Blast_Score=342, Evalue=3e-94, Organism=Caenorhabditis elegans, GI17555318, Length=540, Percent_Identity=34.8148148148148, Blast_Score=325, Evalue=5e-89, Organism=Caenorhabditis elegans, GI17559834, Length=554, Percent_Identity=33.5740072202166, Blast_Score=306, Evalue=2e-83, Organism=Caenorhabditis elegans, GI17565586, Length=245, Percent_Identity=26.9387755102041, Blast_Score=71, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6321121, Length=557, Percent_Identity=35.7271095152603, Blast_Score=336, Evalue=9e-93, Organism=Saccharomyces cerevisiae, GI6320874, Length=531, Percent_Identity=33.1450094161959, Blast_Score=293, Evalue=7e-80, Organism=Saccharomyces cerevisiae, GI6325030, Length=390, Percent_Identity=29.2307692307692, Blast_Score=150, Evalue=5e-37, Organism=Saccharomyces cerevisiae, GI6323278, Length=406, Percent_Identity=28.5714285714286, Blast_Score=144, Evalue=3e-35, Organism=Saccharomyces cerevisiae, GI6324314, Length=403, Percent_Identity=26.7990074441687, Blast_Score=141, Evalue=4e-34, Organism=Drosophila melanogaster, GI24666836, Length=536, Percent_Identity=38.2462686567164, Blast_Score=369, Evalue=1e-102, Organism=Drosophila melanogaster, GI24642252, Length=523, Percent_Identity=37.6673040152964, Blast_Score=340, Evalue=1e-93, Organism=Drosophila melanogaster, GI18859989, Length=523, Percent_Identity=37.6673040152964, Blast_Score=340, Evalue=1e-93, Organism=Drosophila melanogaster, GI24641342, Length=543, Percent_Identity=33.3333333333333, Blast_Score=310, Evalue=3e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 71094; Mature: 71094
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU ; PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRIDQLVLQRGTKVLFDHTSVTLNPGERVGLVGANGSGKSTLFAMLRGELHADGGDVTV CCCHHHHHHHCCCEEEEECCEEEECCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEE PAQWRIAHVAQETPAVARSAVEYVIDGDTRLREIEAAIAEAQAVGDGSAEGEAHAAFADA CCCHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECC DGYTAPARAEALLLGLGFTLPQVSQPVSSFSGGWRMRLNLAQALMCPSDLLLLDEPTNHL CCCCCCHHHHEEEEECCCCCHHHHHHHHHCCCCEEEEEEHHHHHHCCCCEEEEECCCCCC DLDAIVWLEDWLARYPGTLVMISHDREFLDAICNVTVHIENQQLRRYGGNYTLFETLRLQ CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCEEEEECCHHHHHCCCCEEHHHHHHHH QMAQQQAAYTRQQKEIAHLESFITRFKAKATKARQAQSRVKALEKMERLAPVHVAAGFAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCEEE EFREPDAAPNPMMVLDGVDCGYAEADPPATILHKLALSIQNGQRIGLLGANGQGKSTLVK EECCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHH TLAGTQDPLTGTLRLGKGLQIGYFAQHQLETLRDHESPLQHLARLAPDTREQELRDFLGS HHCCCCCCCCEEEECCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHC FNFRGDMATAPIEPFSGGEKARLALSLIVWQKPNLLLLDEPTNHLDLDTREALTMALAQF CCCCCCCCCCCCCCCCCCCHHEEEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHH EGTLILVSHDRHLLRATADQFMLVADGTIKPFDGDLDDYRDWLLQQAAAKRNAAVAAHQG CCEEEEEECCCHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECC ETGGNAAAVNRKDQRRAEADERQRLAQLRKPLTKELEKVEKRMTVLQTAKAEIDQFMADE CCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TSYAEANKSKLMEMLKRQGEVNGELETLEEKWLELQEQIEQIE HHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIRIDQLVLQRGTKVLFDHTSVTLNPGERVGLVGANGSGKSTLFAMLRGELHADGGDVTV CCCHHHHHHHCCCEEEEECCEEEECCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEE PAQWRIAHVAQETPAVARSAVEYVIDGDTRLREIEAAIAEAQAVGDGSAEGEAHAAFADA CCCHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECC DGYTAPARAEALLLGLGFTLPQVSQPVSSFSGGWRMRLNLAQALMCPSDLLLLDEPTNHL CCCCCCHHHHEEEEECCCCCHHHHHHHHHCCCCEEEEEEHHHHHHCCCCEEEEECCCCCC DLDAIVWLEDWLARYPGTLVMISHDREFLDAICNVTVHIENQQLRRYGGNYTLFETLRLQ CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCEEEEECCHHHHHCCCCEEHHHHHHHH QMAQQQAAYTRQQKEIAHLESFITRFKAKATKARQAQSRVKALEKMERLAPVHVAAGFAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCEEE EFREPDAAPNPMMVLDGVDCGYAEADPPATILHKLALSIQNGQRIGLLGANGQGKSTLVK EECCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHH TLAGTQDPLTGTLRLGKGLQIGYFAQHQLETLRDHESPLQHLARLAPDTREQELRDFLGS HHCCCCCCCCEEEECCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHC FNFRGDMATAPIEPFSGGEKARLALSLIVWQKPNLLLLDEPTNHLDLDTREALTMALAQF CCCCCCCCCCCCCCCCCCCHHEEEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHH EGTLILVSHDRHLLRATADQFMLVADGTIKPFDGDLDDYRDWLLQQAAAKRNAAVAAHQG CCEEEEEECCCHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECC ETGGNAAAVNRKDQRRAEADERQRLAQLRKPLTKELEKVEKRMTVLQTAKAEIDQFMADE CCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TSYAEANKSKLMEMLKRQGEVNGELETLEEKWLELQEQIEQIE HHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]