| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is yfcB [C]
Identifier: 73541585
GI number: 73541585
Start: 2078750
End: 2079643
Strand: Direct
Name: yfcB [C]
Synonym: Reut_A1896
Alternate gene names: 73541585
Gene position: 2078750-2079643 (Clockwise)
Preceding gene: 73541584
Following gene: 73541586
Centisome position: 54.61
GC content: 67.79
Gene sequence:
>894_bases ATGGCAACCCCCTCCCCGCTGCGCACCGTGCGCGACCTGCTGCGCCTGGCGGTGTCGCGCTTCACCGCCGCGCGCCTCTC GTTCGGCCACGGCAGCGCCAATGCCTATGACGAAGCCGCCTACCTGGTGCTGCATACGCTGAACCTGCCGCTCGATACGC TCGACCCGTTCCTCGACGCGCGCCTGTTGCCCGAGGAAATTGACGCGGTGATGCGCGTCATCGACCGCCGCGTCAACGAA CGCGTGCCGGCCGCCTACATCACGCACGAGGCCTATATGCACGGCCTGCGCTTCTACGTCGATTCGCGCGTGATCGTGCC GCGCAGCTTCATCGGCGAACTGCTGCAGGAAGGGCTGGAGCCGTGGATCGGCGAAACCAGCCAGGTCGGGCCGGTGCTGG AGCTTTGCACGGGTTCCGGCTGCCTGCCGATCATTGCGGCCCATGTCTGGCCCAATGCGCAGATCGACGCCGTCGACATC TCGCCCGACGCGCTCGCCGTGGCCCGCCGCAACGTGGCCGACTACAAGATGCAGGACCGCATCCACCTGTTCGAGGGCGA CCTGTACGCGCCGCTGCCGGCAGGGGCCACGTACGACGTGATTCTGACCAACCCGCCGTACGTCAACGAATCGTCGATGC AGGCGCTGCCGCCCGAATACCTGGCCGAGCCGCGCGTTGCGCTGGCCGGCGGTGACGACGGCATGGACGTGGTGCGCCGG ATCATCGCCGGCGCCAAGGCGCGGCTGAACCCGGGCGGCGTACTGGTCGTGGAGATCGGCAACGAGCACGCCAATGTGGA AGCGGCGTTCCCGAACCTCGAAATCGTCTGGCTGCCCGTGAGCGCGGGCGACGAGCAGGTGTTCCTGCTGACTTACGATG CCCTGTCCGGCTAA
Upstream 100 bases:
>100_bases TATCGATCCGCTCAAGAACGTCTATCGCGGCGTGCTCGAACGGCTCATTGCCTGATCGCCTGCCGATCGCTCCCCCCATC GACCACAGGACTCCACGACC
Downstream 100 bases:
>100_bases TCGGCCATCCGTAGTACGGGGCGCGGCCGGCTGCTGCGCCCCGGGTTCCTGAAGTCCTGAATCTGCAGCACCCATAACAA GAACAATGACCGGAGACGAC
Product: N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MATPSPLRTVRDLLRLAVSRFTAARLSFGHGSANAYDEAAYLVLHTLNLPLDTLDPFLDARLLPEEIDAVMRVIDRRVNE RVPAAYITHEAYMHGLRFYVDSRVIVPRSFIGELLQEGLEPWIGETSQVGPVLELCTGSGCLPIIAAHVWPNAQIDAVDI SPDALAVARRNVADYKMQDRIHLFEGDLYAPLPAGATYDVILTNPPYVNESSMQALPPEYLAEPRVALAGGDDGMDVVRR IIAGAKARLNPGGVLVVEIGNEHANVEAAFPNLEIVWLPVSAGDEQVFLLTYDALSG
Sequences:
>Translated_297_residues MATPSPLRTVRDLLRLAVSRFTAARLSFGHGSANAYDEAAYLVLHTLNLPLDTLDPFLDARLLPEEIDAVMRVIDRRVNE RVPAAYITHEAYMHGLRFYVDSRVIVPRSFIGELLQEGLEPWIGETSQVGPVLELCTGSGCLPIIAAHVWPNAQIDAVDI SPDALAVARRNVADYKMQDRIHLFEGDLYAPLPAGATYDVILTNPPYVNESSMQALPPEYLAEPRVALAGGDDGMDVVRR IIAGAKARLNPGGVLVVEIGNEHANVEAAFPNLEIVWLPVSAGDEQVFLLTYDALSG >Mature_296_residues ATPSPLRTVRDLLRLAVSRFTAARLSFGHGSANAYDEAAYLVLHTLNLPLDTLDPFLDARLLPEEIDAVMRVIDRRVNER VPAAYITHEAYMHGLRFYVDSRVIVPRSFIGELLQEGLEPWIGETSQVGPVLELCTGSGCLPIIAAHVWPNAQIDAVDIS PDALAVARRNVADYKMQDRIHLFEGDLYAPLPAGATYDVILTNPPYVNESSMQALPPEYLAEPRVALAGGDDGMDVVRRI IAGAKARLNPGGVLVVEIGNEHANVEAAFPNLEIVWLPVSAGDEQVFLLTYDALSG
Specific function: Unknown
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI7705409, Length=252, Percent_Identity=28.968253968254, Blast_Score=89, Evalue=5e-18, Organism=Escherichia coli, GI87082085, Length=289, Percent_Identity=44.2906574394464, Blast_Score=249, Evalue=2e-67, Organism=Escherichia coli, GI1787463, Length=258, Percent_Identity=27.5193798449612, Blast_Score=84, Evalue=1e-17, Organism=Drosophila melanogaster, GI24582226, Length=240, Percent_Identity=28.3333333333333, Blast_Score=82, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR017127 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 32402; Mature: 32271
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPSPLRTVRDLLRLAVSRFTAARLSFGHGSANAYDEAAYLVLHTLNLPLDTLDPFLDA CCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHEEEEEEECCCCHHHHHHHHHH RLLPEEIDAVMRVIDRRVNERVPAAYITHEAYMHGLRFYVDSRVIVPRSFIGELLQEGLE CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHH PWIGETSQVGPVLELCTGSGCLPIIAAHVWPNAQIDAVDISPDALAVARRNVADYKMQDR HHCCCCCCCCHHHHHHCCCCCHHHHEECCCCCCEEEEEECCCHHHHHHHHCHHHHHHHCC IHLFEGDLYAPLPAGATYDVILTNPPYVNESSMQALPPEYLAEPRVALAGGDDGMDVVRR EEEECCCEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCEEEECCCCCHHHHHH IIAGAKARLNPGGVLVVEIGNEHANVEAAFPNLEIVWLPVSAGDEQVFLLTYDALSG HHHCCCCEECCCCEEEEEECCCCCCEEEECCCEEEEEEEECCCCCEEEEEEECCCCC >Mature Secondary Structure ATPSPLRTVRDLLRLAVSRFTAARLSFGHGSANAYDEAAYLVLHTLNLPLDTLDPFLDA CCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHEEEEEEECCCCHHHHHHHHHH RLLPEEIDAVMRVIDRRVNERVPAAYITHEAYMHGLRFYVDSRVIVPRSFIGELLQEGLE CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHH PWIGETSQVGPVLELCTGSGCLPIIAAHVWPNAQIDAVDISPDALAVARRNVADYKMQDR HHCCCCCCCCHHHHHHCCCCCHHHHEECCCCCCEEEEEECCCHHHHHHHHCHHHHHHHCC IHLFEGDLYAPLPAGATYDVILTNPPYVNESSMQALPPEYLAEPRVALAGGDDGMDVVRR EEEECCCEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCEEEECCCCCHHHHHH IIAGAKARLNPGGVLVVEIGNEHANVEAAFPNLEIVWLPVSAGDEQVFLLTYDALSG HHHCCCCEECCCCEEEEEECCCCCCEEEECCCEEEEEEEECCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]