| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is mii [H]
Identifier: 73541500
GI number: 73541500
Start: 1980778
End: 1981971
Strand: Direct
Name: mii [H]
Synonym: Reut_A1811
Alternate gene names: 73541500
Gene position: 1980778-1981971 (Clockwise)
Preceding gene: 161611260
Following gene: 73541501
Centisome position: 52.04
GC content: 66.58
Gene sequence:
>1194_bases ATGGCCCACGTACCCCAGATCAAGATTCCCGCCACCTACATTCGCGGTGGCACCAGCAAGGGCGTGTTCTTCCGCCTGCA GGACCTGCCCGAGACGGCGCAGGTTCCCGGCAAGGCACGCGACGCGCTGCTGATGCGCGTGATTGGCAGCCCTGACCCGT ACGGCAAGCAGATCGACGGCATGGGGGCTGCGACGTCGAGCACCAGCAAGACGGTGATCGTGTCGAAGAGCAGCCGCCCG GACCACGACGTCGACTACCTGTTCGGCCAGGTCTCGATCGACCAGCCGTTCGTCGACTGGAGCGGCAACTGCGGCAACCT GTCCGCCGCAGTCGGCCCGTTCGCGATCAGCGGCGGCCTCGTCGATGCGTCGCGCGTGCCGCAGAATGGCACGGCCGTCG TGCGCATCTGGCAGGCGAACATCGGCAAGACCATCATCGCCCACGTGCCCATCACCAACGGTGAAGTGCAGGAAACCGGC GATTTCGAACTCGACGGCGTGACCTTCCCCGCCGCTGAAGTCCAGCTCGAATTCATGGACCCGGCCGCCGACGAAGAAGG CGACGGCGGCGGTGCGATGTTCCCGACGGGCAATCTCGTCGATGATCTCGAAGTGCCTGGCGTGGGCACATTCAAGGCGA CCATGATCAACGCCGGCATTCCGACGATCTTCGTCAACGCGGAAGCCATCGGCTACACCGGCACCGAACTGCAGGAAGCC ATCAACGGCGATCCGAAGGCGCTGGCGATGTTCGAGACGATCCGTGCCTACGGCGCCGTGCGCATGGGCCTGATCAAGAG CGTCGATGAGGCCGCCAAGCGCCAGCACACGCCGAAGGTCGCCTTCGTCGCGAAGCCGAAGGACTATGTCGCTTCCAGCG GCAAGCCGGTCGGCGCCGGCGACGTGGACCTCCTCGTGCGTGCGCTGTCGATGGGCAAGCTGCACCACGCGATGATGGGC ACGGCCGCCGTGGCGATTGGCACCGCTGCAGCCATCCCGGGTACGCTGGTCAACCTGGCGGCCGGTGGCGGCGAACGCAA TGCGGTGCGCTTTGGCCATCCGTCGGGCACGCTGCGCGTGGGTGCGGAAGCGAGCCAGTCCAACGGCGACTGGACCGTCA CCAAGGCCATCATGAGCCGCAGCGCACGCGTGCTGATGGAAGGCTGGGTGCGCGTGCCGGGCGACGCGTTCTGA
Upstream 100 bases:
>100_bases CTTCCTTGAATCCGCGAAAGCGGCTGCTTAAGGTAGCGAGATAAGCGGGCGGTGCGGCAACGTACCGCCCGCTGCAGTTT TGACCAGGACAAAGACTTCC
Downstream 100 bases:
>100_bases TTGGAAAGCGCCGGGGTCCCGGCGCGCTCCTGACCTTGCCGCCGGTGGCAATACTTCCGCCGGCCATCCGGACCGCCGCA ATGCATATGCGGATTTCTAT
Product: methylitaconate delta2-delta3-isomerase
Products: NA
Alternate protein names: (R)-3-methylitaconate isomerase; 3-methylitaconate delta-isomerase [H]
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MAHVPQIKIPATYIRGGTSKGVFFRLQDLPETAQVPGKARDALLMRVIGSPDPYGKQIDGMGAATSSTSKTVIVSKSSRP DHDVDYLFGQVSIDQPFVDWSGNCGNLSAAVGPFAISGGLVDASRVPQNGTAVVRIWQANIGKTIIAHVPITNGEVQETG DFELDGVTFPAAEVQLEFMDPAADEEGDGGGAMFPTGNLVDDLEVPGVGTFKATMINAGIPTIFVNAEAIGYTGTELQEA INGDPKALAMFETIRAYGAVRMGLIKSVDEAAKRQHTPKVAFVAKPKDYVASSGKPVGAGDVDLLVRALSMGKLHHAMMG TAAVAIGTAAAIPGTLVNLAAGGGERNAVRFGHPSGTLRVGAEASQSNGDWTVTKAIMSRSARVLMEGWVRVPGDAF
Sequences:
>Translated_397_residues MAHVPQIKIPATYIRGGTSKGVFFRLQDLPETAQVPGKARDALLMRVIGSPDPYGKQIDGMGAATSSTSKTVIVSKSSRP DHDVDYLFGQVSIDQPFVDWSGNCGNLSAAVGPFAISGGLVDASRVPQNGTAVVRIWQANIGKTIIAHVPITNGEVQETG DFELDGVTFPAAEVQLEFMDPAADEEGDGGGAMFPTGNLVDDLEVPGVGTFKATMINAGIPTIFVNAEAIGYTGTELQEA INGDPKALAMFETIRAYGAVRMGLIKSVDEAAKRQHTPKVAFVAKPKDYVASSGKPVGAGDVDLLVRALSMGKLHHAMMG TAAVAIGTAAAIPGTLVNLAAGGGERNAVRFGHPSGTLRVGAEASQSNGDWTVTKAIMSRSARVLMEGWVRVPGDAF >Mature_396_residues AHVPQIKIPATYIRGGTSKGVFFRLQDLPETAQVPGKARDALLMRVIGSPDPYGKQIDGMGAATSSTSKTVIVSKSSRPD HDVDYLFGQVSIDQPFVDWSGNCGNLSAAVGPFAISGGLVDASRVPQNGTAVVRIWQANIGKTIIAHVPITNGEVQETGD FELDGVTFPAAEVQLEFMDPAADEEGDGGGAMFPTGNLVDDLEVPGVGTFKATMINAGIPTIFVNAEAIGYTGTELQEAI NGDPKALAMFETIRAYGAVRMGLIKSVDEAAKRQHTPKVAFVAKPKDYVASSGKPVGAGDVDLLVRALSMGKLHHAMMGT AAVAIGTAAAIPGTLVNLAAGGGERNAVRFGHPSGTLRVGAEASQSNGDWTVTKAIMSRSARVLMEGWVRVPGDAF
Specific function: Catalyzes the reversible isomerization of (R)-3- methylitaconate to 2,3-dimethylmaleate. Has very low isomerase activity with itaconate [H]
COG id: COG2828
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786985, Length=387, Percent_Identity=34.625322997416, Blast_Score=177, Evalue=1e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007400 [H]
Pfam domain/function: PF04303 PrpF [H]
EC number: =5.3.3.6 [H]
Molecular weight: Translated: 41373; Mature: 41242
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHVPQIKIPATYIRGGTSKGVFFRLQDLPETAQVPGKARDALLMRVIGSPDPYGKQIDG CCCCCCEECCHHEECCCCCCCEEEEEECCCCHHCCCCCHHHHHHHHHHCCCCCCCCCCCC MGAATSSTSKTVIVSKSSRPDHDVDYLFGQVSIDQPFVDWSGNCGNLSAAVGPFAISGGL CCCCCCCCCEEEEEECCCCCCCCHHEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCC VDASRVPQNGTAVVRIWQANIGKTIIAHVPITNGEVQETGDFELDGVTFPAAEVQLEFMD EEHHCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCEEECCEECCHHEEEEEEEC PAADEEGDGGGAMFPTGNLVDDLEVPGVGTFKATMINAGIPTIFVNAEAIGYTGTELQEA CCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECEECCCCCHHHHHH INGDPKALAMFETIRAYGAVRMGLIKSVDEAAKRQHTPKVAFVAKPKDYVASSGKPVGAG HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCCCCC DVDLLVRALSMGKLHHAMMGTAAVAIGTAAAIPGTLVNLAAGGGERNAVRFGHPSGTLRV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCCEEE GAEASQSNGDWTVTKAIMSRSARVLMEGWVRVPGDAF CCCCCCCCCCEEEHHHHHHHHHHEEECCCEECCCCCC >Mature Secondary Structure AHVPQIKIPATYIRGGTSKGVFFRLQDLPETAQVPGKARDALLMRVIGSPDPYGKQIDG CCCCCEECCHHEECCCCCCCEEEEEECCCCHHCCCCCHHHHHHHHHHCCCCCCCCCCCC MGAATSSTSKTVIVSKSSRPDHDVDYLFGQVSIDQPFVDWSGNCGNLSAAVGPFAISGGL CCCCCCCCCEEEEEECCCCCCCCHHEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCC VDASRVPQNGTAVVRIWQANIGKTIIAHVPITNGEVQETGDFELDGVTFPAAEVQLEFMD EEHHCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCEEECCEECCHHEEEEEEEC PAADEEGDGGGAMFPTGNLVDDLEVPGVGTFKATMINAGIPTIFVNAEAIGYTGTELQEA CCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECEECCCCCHHHHHH INGDPKALAMFETIRAYGAVRMGLIKSVDEAAKRQHTPKVAFVAKPKDYVASSGKPVGAG HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCCCCC DVDLLVRALSMGKLHHAMMGTAAVAIGTAAAIPGTLVNLAAGGGERNAVRFGHPSGTLRV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCCEEE GAEASQSNGDWTVTKAIMSRSARVLMEGWVRVPGDAF CCCCCCCCCCEEEHHHHHHHHHHEEECCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA