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The map label for this gene is yagI [H]

Identifier: 73541360

GI number: 73541360

Start: 1802450

End: 1803274

Strand: Direct

Name: yagI [H]

Synonym: Reut_A1670

Alternate gene names: 73541360

Gene position: 1802450-1803274 (Clockwise)

Preceding gene: 73541356

Following gene: 73541363

Centisome position: 47.35

GC content: 66.3

Gene sequence:

>825_bases
ATGCCAAATGGATCACATAATCCGATGACCTTGCCAACCGCTGCGAGCGCGGACGCCGAAGGCGAAGCCCGCCTTGTCAG
CGCCCTTGCGCGTGGCATTTCGATCCTCAACTGCTTTTCGCCGACCGTGCAGGAGCTGAGCAGCCGCGAACTCATGGAGC
GGACCGGTCTGGCCAAGCCGACCCTTTTTCGGTTGCTCGATACCCTCTGCGAGCTGGGCCTGCTGCATTACTCGGAGCGC
TTGTCGCGCTACGTGCCGGGCGTCGGACTCGTCAACATGGCCGCGCCCGCGCTCGCGCGCATGACGGTGCGCCAACTCGC
GCGCCCGTTGATGCAGGAACTGGCCGACCATATCGAGGGTCAGGTCGAACTGATGGTCGGCTACGGGCACACGCTGACCT
ACGTGGAGATCGCCCAAGGCCTGCGCAGCCGTGTATTCCGGCCGGAAGTCGGCACCCGCGTGTCGATGTCGCGGACGGCG
TCGGGCCGCGCCTACCTGTCAATGATGGGTGAGAGGGAACGGAACGCTTACCTGGAACAACTCCGCGCCACCGATCCGCA
GCGCGCGACGTGGCTGCAGGGCCGGCTGGAAGAGGCCCTGCACGACCTTGACGAGCACGGCTTCTGCCGTGGCCACCGCG
ATCTGCATCGGGAAATCGAGGCGATTGCCGTGCCCATGCGCGCCCGGCGCGATGGCGAAGCCTGGCTGGTCGCCGCCTCC
GTGCCTGTATTCAGCCAGCAGAGCAAGCAACTGTTCGAAGACGTCGGGCCGCGGCTGGTCAGCCTGGTGCGCAACGTGGA
GGGGTCGCTGGGGGCAGCGGGGTAA

Upstream 100 bases:

>100_bases
TGTAAATCTAAAGACGCTCGATTTGACTTCGGGAAAAACGAAGGGCACCATCCAGGTTTTGAGACGCTGGTATCGAAAAA
CCCGAGAAGCAGCCGTTTAT

Downstream 100 bases:

>100_bases
TGTGAAACAAAGGCGGCGCGCAAGGGCAATCCGGCGGCCGCCTGAAGTCCACGCCTCAGTTGCCCGAAAACACCGGCTTG
CGCTTTTCCAGGAAGGCCTG

Product: regulatory protein, IclR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MPNGSHNPMTLPTAASADAEGEARLVSALARGISILNCFSPTVQELSSRELMERTGLAKPTLFRLLDTLCELGLLHYSER
LSRYVPGVGLVNMAAPALARMTVRQLARPLMQELADHIEGQVELMVGYGHTLTYVEIAQGLRSRVFRPEVGTRVSMSRTA
SGRAYLSMMGERERNAYLEQLRATDPQRATWLQGRLEEALHDLDEHGFCRGHRDLHREIEAIAVPMRARRDGEAWLVAAS
VPVFSQQSKQLFEDVGPRLVSLVRNVEGSLGAAG

Sequences:

>Translated_274_residues
MPNGSHNPMTLPTAASADAEGEARLVSALARGISILNCFSPTVQELSSRELMERTGLAKPTLFRLLDTLCELGLLHYSER
LSRYVPGVGLVNMAAPALARMTVRQLARPLMQELADHIEGQVELMVGYGHTLTYVEIAQGLRSRVFRPEVGTRVSMSRTA
SGRAYLSMMGERERNAYLEQLRATDPQRATWLQGRLEEALHDLDEHGFCRGHRDLHREIEAIAVPMRARRDGEAWLVAAS
VPVFSQQSKQLFEDVGPRLVSLVRNVEGSLGAAG
>Mature_273_residues
PNGSHNPMTLPTAASADAEGEARLVSALARGISILNCFSPTVQELSSRELMERTGLAKPTLFRLLDTLCELGLLHYSERL
SRYVPGVGLVNMAAPALARMTVRQLARPLMQELADHIEGQVELMVGYGHTLTYVEIAQGLRSRVFRPEVGTRVSMSRTAS
GRAYLSMMGERERNAYLEQLRATDPQRATWLQGRLEEALHDLDEHGFCRGHRDLHREIEAIAVPMRARRDGEAWLVAASV
PVFSQQSKQLFEDVGPRLVSLVRNVEGSLGAAG

Specific function: Unknown

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 iclR-ED (iclR effector binding) domain [H]

Homologues:

Organism=Escherichia coli, GI1786468, Length=204, Percent_Identity=26.9607843137255, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014757
- InterPro:   IPR005471
- InterPro:   IPR011991 [H]

Pfam domain/function: PF09339 HTH_IclR; PF01614 IclR [H]

EC number: NA

Molecular weight: Translated: 30271; Mature: 30140

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNGSHNPMTLPTAASADAEGEARLVSALARGISILNCFSPTVQELSSRELMERTGLAKP
CCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCH
TLFRLLDTLCELGLLHYSERLSRYVPGVGLVNMAAPALARMTVRQLARPLMQELADHIEG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QVELMVGYGHTLTYVEIAQGLRSRVFRPEVGTRVSMSRTASGRAYLSMMGERERNAYLEQ
EEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCEEHHHCCCCHHHHHHHHHHHHHHHHHH
LRATDPQRATWLQGRLEEALHDLDEHGFCRGHRDLHREIEAIAVPMRARRDGEAWLVAAS
HHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
VPVFSQQSKQLFEDVGPRLVSLVRNVEGSLGAAG
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PNGSHNPMTLPTAASADAEGEARLVSALARGISILNCFSPTVQELSSRELMERTGLAKP
CCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCH
TLFRLLDTLCELGLLHYSERLSRYVPGVGLVNMAAPALARMTVRQLARPLMQELADHIEG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QVELMVGYGHTLTYVEIAQGLRSRVFRPEVGTRVSMSRTASGRAYLSMMGERERNAYLEQ
EEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCEEHHHCCCCHHHHHHHHHHHHHHHHHH
LRATDPQRATWLQGRLEEALHDLDEHGFCRGHRDLHREIEAIAVPMRARRDGEAWLVAAS
HHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
VPVFSQQSKQLFEDVGPRLVSLVRNVEGSLGAAG
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]