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The map label for this gene is uxuR [H]

Identifier: 73541122

GI number: 73541122

Start: 1544760

End: 1545497

Strand: Reverse

Name: uxuR [H]

Synonym: Reut_A1428

Alternate gene names: 73541122

Gene position: 1545497-1544760 (Counterclockwise)

Preceding gene: 73541124

Following gene: 73541121

Centisome position: 40.6

GC content: 68.7

Gene sequence:

>738_bases
GTGTTCCAGAAAGTACCTGCCCGCGCCCTGACCGACAACGTCGCCGAGCAACTGCTCGACAAGATCCAGAGCGGCGCTTT
CGCACGGGGCGACAAGCTGCCGACCGAAGCCGTACTGTCCGAAGAATTCGGCGTCAGCCGCACCGTTATCCGCGAAGCGA
TCTCGCGGCTCAAGTACGAAGGCGTAGTCGAGTCGCGCCAGGGCAGCGGCGTGTTCGTGACCGAACAGGCCGGTATCCGC
CCGCTGCGGATCGACTACACCGACACCGGTACGCTCGACTCGGTGCTGCAGATCGTCGAACTGCGCCGTGCCATCGAGGC
CGAGGTGGCCGCGCAGGCGGCACGCCGCCGCACCGATGCCACCATGACGGCGATCGACACCGCGCTGGCCCGCCTTGACG
CGGAAGTGGCCGAGGGGGGCGACGGCGTCGCGGCCGACGTGGCCTTCCACCGCGCGATTGCCACGGCCACGGGCAATCCC
TATTTCCTGAAAACGCTGGAGTTCCTGAGCCAGTACCTGGAAGCCGCCACGCGCGTGACGCGGACCAACGAAGCGCGCCG
CGCCGACTTCACGCGCCAGGTGCGCGAGGAACACCAGGCTATCGTCGCCGCGATTCGCGCCGGCGACGCGCTGGCCGCGC
GCAATGCCGCGCAGAACCACATGTACAACGCCGCCCGCCGCCTGTCCCAGCTCGGCCAGGACGAAGCGGACGACGAGCGT
CCCGGCACCGCCAGCTAA

Upstream 100 bases:

>100_bases
CCGGTCTAGTGCGGCAAGCACCAAATCAGGGTTTACGCTCAGTACCATATCACCATTAAATTTGTATGATGACCTGACTA
CCGTATAACCCGATGATGCC

Downstream 100 bases:

>100_bases
GCCGGCGCCGCCCTATCGATTGACCTGCCTTACCTGCATCAGGAGTTTTCTATGTCCCGGAATATCGGCGTAATCGGCCT
TGGCGCCATGGGCAACGGTG

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MFQKVPARALTDNVAEQLLDKIQSGAFARGDKLPTEAVLSEEFGVSRTVIREAISRLKYEGVVESRQGSGVFVTEQAGIR
PLRIDYTDTGTLDSVLQIVELRRAIEAEVAAQAARRRTDATMTAIDTALARLDAEVAEGGDGVAADVAFHRAIATATGNP
YFLKTLEFLSQYLEAATRVTRTNEARRADFTRQVREEHQAIVAAIRAGDALAARNAAQNHMYNAARRLSQLGQDEADDER
PGTAS

Sequences:

>Translated_245_residues
MFQKVPARALTDNVAEQLLDKIQSGAFARGDKLPTEAVLSEEFGVSRTVIREAISRLKYEGVVESRQGSGVFVTEQAGIR
PLRIDYTDTGTLDSVLQIVELRRAIEAEVAAQAARRRTDATMTAIDTALARLDAEVAEGGDGVAADVAFHRAIATATGNP
YFLKTLEFLSQYLEAATRVTRTNEARRADFTRQVREEHQAIVAAIRAGDALAARNAAQNHMYNAARRLSQLGQDEADDER
PGTAS
>Mature_245_residues
MFQKVPARALTDNVAEQLLDKIQSGAFARGDKLPTEAVLSEEFGVSRTVIREAISRLKYEGVVESRQGSGVFVTEQAGIR
PLRIDYTDTGTLDSVLQIVELRRAIEAEVAAQAARRRTDATMTAIDTALARLDAEVAEGGDGVAADVAFHRAIATATGNP
YFLKTLEFLSQYLEAATRVTRTNEARRADFTRQVREEHQAIVAAIRAGDALAARNAAQNHMYNAARRLSQLGQDEADDER
PGTAS

Specific function: Repressor for the uxuRBA operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790032, Length=240, Percent_Identity=34.1666666666667, Blast_Score=108, Evalue=2e-25,
Organism=Escherichia coli, GI48994955, Length=231, Percent_Identity=30.3030303030303, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1790780, Length=214, Percent_Identity=28.0373831775701, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1789621, Length=235, Percent_Identity=28.0851063829787, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI87082208, Length=225, Percent_Identity=29.3333333333333, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1786303, Length=226, Percent_Identity=30.0884955752212, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI48994961, Length=220, Percent_Identity=30.4545454545455, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1789353, Length=234, Percent_Identity=26.4957264957265, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 26661; Mature: 26661

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQKVPARALTDNVAEQLLDKIQSGAFARGDKLPTEAVLSEEFGVSRTVIREAISRLKYE
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHH
GVVESRQGSGVFVTEQAGIRPLRIDYTDTGTLDSVLQIVELRRAIEAEVAAQAARRRTDA
HHHHCCCCCCEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMTAIDTALARLDAEVAEGGDGVAADVAFHRAIATATGNPYFLKTLEFLSQYLEAATRVT
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
RTNEARRADFTRQVREEHQAIVAAIRAGDALAARNAAQNHMYNAARRLSQLGQDEADDER
HCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PGTAS
CCCCC
>Mature Secondary Structure
MFQKVPARALTDNVAEQLLDKIQSGAFARGDKLPTEAVLSEEFGVSRTVIREAISRLKYE
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHH
GVVESRQGSGVFVTEQAGIRPLRIDYTDTGTLDSVLQIVELRRAIEAEVAAQAARRRTDA
HHHHCCCCCCEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMTAIDTALARLDAEVAEGGDGVAADVAFHRAIATATGNPYFLKTLEFLSQYLEAATRVT
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
RTNEARRADFTRQVREEHQAIVAAIRAGDALAARNAAQNHMYNAARRLSQLGQDEADDER
HCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PGTAS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]