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The map label for this gene is ygbL [H]

Identifier: 73541119

GI number: 73541119

Start: 1541850

End: 1542503

Strand: Reverse

Name: ygbL [H]

Synonym: Reut_A1425

Alternate gene names: 73541119

Gene position: 1542503-1541850 (Counterclockwise)

Preceding gene: 73541120

Following gene: 73541118

Centisome position: 40.52

GC content: 65.44

Gene sequence:

>654_bases
ATGAGCCAGGAAAGCAAGCTGCGCGAAGAGATCTGCCGCATCGGCGCTAGCCTGTACCAGCGCGGCTATACCGTTGGCTC
GGCCGGCAATATCAGCGCGCGGCTTGATGACGGCTGGCTGATCACGCCGACCGACGCGTGCCTCGGCATGATGGATCCGG
CTGCCGTGGCGAAGGTATCCGCAGATGGCAACTGGGTGTCCGGCGACAAGCCGTCGAAGACGCTGACGCTGCACCGTGCC
ATCTACGACCACAATGCCGAGGCGAAGGCAGTCGTGCACACGCACTCGACGCATCTTGTCGCATTGACGCTGGCCGGCGT
GTGGCAGCCCGACGATATCGTGCCGCCGCTCACGCCTTACTACGTGATGAAGGTCGGTCATATCCCGATGATCCCGTACC
ACCGGCCGGGCGATCCGGCCGTGGCGGCGCGTGTCGCCTCGCTTGCCAACAAGGTGCGCGGCGTGATGCTCGAGCGACTC
GGTCCCGTGGTGTGGGAATCCAGCGTCTCGCGCGCAGCGTTCGCGCTCGAAGAGCTGGAAGAGACCGCGAAGCTCTGGAT
GATGATGAAAGACATGCCGGGCTTCGCGGCCCGCGCCGCGCTCGGCGAGAGCGCTCTGGCTGAACTACGGGAGACCTTCC
AGGCCCGCTGGTAG

Upstream 100 bases:

>100_bases
TCACGCTCGATGCGCAGCCCCTCGCGCTAGCGTTGAAATCGGGCAACTTCGGCGGCGAGGACTTCTTCGCCGAAGCGCTC
GCGCAACTCGGAGGCCAGTG

Downstream 100 bases:

>100_bases
ACCATCGCAGCAGTACCCCACTAATACAGACGCGATCCCGTGCGCAGCAGCCACAAGGCTGCCGCGCGGAGAACACGCGC
GCCCTCGAAACCCGAACCGG

Product: putative aldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MSQESKLREEICRIGASLYQRGYTVGSAGNISARLDDGWLITPTDACLGMMDPAAVAKVSADGNWVSGDKPSKTLTLHRA
IYDHNAEAKAVVHTHSTHLVALTLAGVWQPDDIVPPLTPYYVMKVGHIPMIPYHRPGDPAVAARVASLANKVRGVMLERL
GPVVWESSVSRAAFALEELEETAKLWMMMKDMPGFAARAALGESALAELRETFQARW

Sequences:

>Translated_217_residues
MSQESKLREEICRIGASLYQRGYTVGSAGNISARLDDGWLITPTDACLGMMDPAAVAKVSADGNWVSGDKPSKTLTLHRA
IYDHNAEAKAVVHTHSTHLVALTLAGVWQPDDIVPPLTPYYVMKVGHIPMIPYHRPGDPAVAARVASLANKVRGVMLERL
GPVVWESSVSRAAFALEELEETAKLWMMMKDMPGFAARAALGESALAELRETFQARW
>Mature_216_residues
SQESKLREEICRIGASLYQRGYTVGSAGNISARLDDGWLITPTDACLGMMDPAAVAKVSADGNWVSGDKPSKTLTLHRAI
YDHNAEAKAVVHTHSTHLVALTLAGVWQPDDIVPPLTPYYVMKVGHIPMIPYHRPGDPAVAARVASLANKVRGVMLERLG
PVVWESSVSRAAFALEELEETAKLWMMMKDMPGFAARAALGESALAELRETFQARW

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family. AraD/FucA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789094, Length=191, Percent_Identity=49.2146596858639, Blast_Score=194, Evalue=5e-51,
Organism=Escherichia coli, GI1789164, Length=187, Percent_Identity=26.7379679144385, Blast_Score=75, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: NA

Molecular weight: Translated: 23666; Mature: 23535

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQESKLREEICRIGASLYQRGYTVGSAGNISARLDDGWLITPTDACLGMMDPAAVAKVS
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEECCHHHHHCCCCCHHHEEEC
ADGNWVSGDKPSKTLTLHRAIYDHNAEAKAVVHTHSTHLVALTLAGVWQPDDIVPPLTPY
CCCCCCCCCCCCHHEEHHHHHHCCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCCHH
YVMKVGHIPMIPYHRPGDPAVAARVASLANKVRGVMLERLGPVVWESSVSRAAFALEELE
HHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
ETAKLWMMMKDMPGFAARAALGESALAELRETFQARW
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SQESKLREEICRIGASLYQRGYTVGSAGNISARLDDGWLITPTDACLGMMDPAAVAKVS
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEECCHHHHHCCCCCHHHEEEC
ADGNWVSGDKPSKTLTLHRAIYDHNAEAKAVVHTHSTHLVALTLAGVWQPDDIVPPLTPY
CCCCCCCCCCCCHHEEHHHHHHCCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCCHH
YVMKVGHIPMIPYHRPGDPAVAARVASLANKVRGVMLERLGPVVWESSVSRAAFALEELE
HHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
ETAKLWMMMKDMPGFAARAALGESALAELRETFQARW
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10986240; 9278503 [H]