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The map label for this gene is yiaM [C]

Identifier: 73540959

GI number: 73540959

Start: 1350419

End: 1351021

Strand: Direct

Name: yiaM [C]

Synonym: Reut_A1264

Alternate gene names: 73540959

Gene position: 1350419-1351021 (Clockwise)

Preceding gene: 73540958

Following gene: 73540960

Centisome position: 35.48

GC content: 63.35

Gene sequence:

>603_bases
ATGGAGCAACAAGAGCAGGCACGGCGTGACGCCGTGCCGCAACACGTCGTCGATTCCGCGGTCATCCCGCAGGCGGCAGA
CGAGGCGCAAGACGCCGACTTCCGGGTGTCACCCCGCGTCGAGGACTGGATCGGCGTGATCGTGATGGTGCTGCTGGTCT
GCATCACCTTCGCCAATGTGGTGGTCCGTTACTTCACCGACGAATCGTTCGCATGGACCGAGGAATTCTCGGTCTTTCTG
ATGATCGTGCTCGCGTTAGTGGCCGGCAGTGCGGCCGTGGCGCGCGATCGGAATATCCGTATCGAATTTTTTTTCGAGCG
TGGCAGCGAGGCACGGCAGAAACGGCTGGCCATCCTGTCGGCGCTGGCGGTCGCCGTGATGTTTATCGCGTTGGCAGTAT
TGGGGGCGCGCATTACGTGGGATGAATACACCTTTGGCGAAACGTCCCCAGGCATCGGCGTACCGAGTTGGTGGTACTCG
GTCTGGTTGCCCGTGCTGTCGGCCGCGATCGCGCTGCGCGCGTTCGGGCTGATGGCGCGCAACGTGCGCGCGCTCAAGGG
GCTGCATGCCGCCCGCAACGAACAAGCGGGGCGCAAGCCATGA

Upstream 100 bases:

>100_bases
TAATCCGCCATGTTTTCTGATTAAGTCTTTACATACAAAATAAGCTGCGGTGGCCGATCAGCCTGATTCGCCCGAGCAGC
CCGGACCGGAGGCCGGGGAG

Downstream 100 bases:

>100_bases
CACTGGTCGCCATCATCCTGTTCGTGGTCTTTATCGGCCTGATGCTGCTGGGCGTGCCCATCGGCGTGTCGCTGGGCCTT
GGCGGGCTTGTCGCCATCGG

Product: tripartite ATP-independent periplasmic transporter DctQ

Products: NA

Alternate protein names: TRAP Transporter Subunit DctQ; TRAP Transporter Small Transmembrane Protein; Integral Membrane Protein; Tripartite ATP-Independent Periplasmic; DctQ1 Protein; TRAP Transporter DctQ Subunit; Tripartite ATP-Independent Periplasmic Transporter

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MEQQEQARRDAVPQHVVDSAVIPQAADEAQDADFRVSPRVEDWIGVIVMVLLVCITFANVVVRYFTDESFAWTEEFSVFL
MIVLALVAGSAAVARDRNIRIEFFFERGSEARQKRLAILSALAVAVMFIALAVLGARITWDEYTFGETSPGIGVPSWWYS
VWLPVLSAAIALRAFGLMARNVRALKGLHAARNEQAGRKP

Sequences:

>Translated_200_residues
MEQQEQARRDAVPQHVVDSAVIPQAADEAQDADFRVSPRVEDWIGVIVMVLLVCITFANVVVRYFTDESFAWTEEFSVFL
MIVLALVAGSAAVARDRNIRIEFFFERGSEARQKRLAILSALAVAVMFIALAVLGARITWDEYTFGETSPGIGVPSWWYS
VWLPVLSAAIALRAFGLMARNVRALKGLHAARNEQAGRKP
>Mature_200_residues
MEQQEQARRDAVPQHVVDSAVIPQAADEAQDADFRVSPRVEDWIGVIVMVLLVCITFANVVVRYFTDESFAWTEEFSVFL
MIVLALVAGSAAVARDRNIRIEFFFERGSEARQKRLAILSALAVAVMFIALAVLGARITWDEYTFGETSPGIGVPSWWYS
VWLPVLSAAIALRAFGLMARNVRALKGLHAARNEQAGRKP

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22226; Mature: 22226

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQQEQARRDAVPQHVVDSAVIPQAADEAQDADFRVSPRVEDWIGVIVMVLLVCITFANV
CCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHH
VVRYFTDESFAWTEEFSVFLMIVLALVAGSAAVARDRNIRIEFFFERGSEARQKRLAILS
HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEECCCHHHHHHHHHHHH
ALAVAVMFIALAVLGARITWDEYTFGETSPGIGVPSWWYSVWLPVLSAAIALRAFGLMAR
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NVRALKGLHAARNEQAGRKP
HHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEQQEQARRDAVPQHVVDSAVIPQAADEAQDADFRVSPRVEDWIGVIVMVLLVCITFANV
CCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHH
VVRYFTDESFAWTEEFSVFLMIVLALVAGSAAVARDRNIRIEFFFERGSEARQKRLAILS
HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEECCCHHHHHHHHHHHH
ALAVAVMFIALAVLGARITWDEYTFGETSPGIGVPSWWYSVWLPVLSAAIALRAFGLMAR
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NVRALKGLHAARNEQAGRKP
HHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA