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The map label for this gene is 73540871

Identifier: 73540871

GI number: 73540871

Start: 1258663

End: 1259754

Strand: Direct

Name: 73540871

Synonym: Reut_A1174

Alternate gene names: NA

Gene position: 1258663-1259754 (Clockwise)

Preceding gene: 73540870

Following gene: 73540872

Centisome position: 33.07

GC content: 59.34

Gene sequence:

>1092_bases
ATGTTTCTGGGGTATCGCAATAAGTGGCTGTGTGCCAGGGCCGCGGCGGTGGCGATCATGTTGCTAGTGGCGGCGGTCGC
GCATGCGCAGGGCAGTATCACCCTTTATGGGCGAGTTGCAGGCGGCGTCGACTATATGAACAAGATCGCCACCGGAAATG
GGCAAACCGCCGATTTGCTGCGTTACGGCAGCAATCAATGGGGGGTAAGCCTGTGGGGGCTCCGGGCCAAGGAGGACCTG
GGTGACGGTCTCAGTGCGGTGATGAACCTGGAGAGCGCATTCTCATCGGGTGACGGGCAGGGAGCGGGCGTGGGCCTCTT
CAGTCGCTATGCTGTTGTCGGGCTTTCCAGCAGCACATACGGAACCCTGTGGCTTGGTCGCGCCATGGGCTTGCCTGACT
CGGAGGGCTGGACCGTCGATCCGATGGGTATGCAGGCCATCAGCATTGGCACACTTCAAAATGGCAGAAGTTGGGGGTCC
CGTGGTAATGCCATCACCTACGCTTCACCGGACTGGGGAGGACTCTCGTTCCGGGCGCAGGCCGGCCTCAATGGTGTCGC
AGGAAATTTCAACGCCGGCAGGCAGTTGGCTGGTAGTTTGAGCTACGACAACGGCCCCATTTTGATCAAGGCGATTTATG
AAGAAATTCGAGATGCCAAAGGGGAATTTACCAATCTATACACTGCCTCACGCCTTTATGAGGCCGGCGCCGCGTATGTG
GTAGGCGGCTTGAAACTGTTCGGGGGCTATAGTCTTACTCGCTCCGGCGGCGCAACGGTGGCAGACGCTGACAATCCCAT
GGCCGCCAATAAGCAGCAACAGTTTTGGCTTGGCGCGAACTACCAGGTATCGCCAGCGCTGACGTTGATCGGTGGTGCAT
ACAGGGCAATCCGGAACAACTCTGCCGGCAACGGAACCCTGCTTGCACTCGGCGCAAACTACTTCTTCTCAAAGCGCACC
CTGTTGTACGGGACGGTCGGTACCGTCATGAACGGCGGAAATGCGGCGTTCTCCGTCGAGGCTGGCAGCAACCGGCCTCT
GGCGGGTGCAAGTCAGCAGGGTGTCTATACGGGCATCGTGCACCGGTTCTGA

Upstream 100 bases:

>100_bases
GCTATTGCCTCTTTTCTGCCATGACGAGATTCTGCGGCGCGCAGCATGGGACCATTTTCAAAGCTAATTCAGGAAATTGA
AGCAGGTAGTGGAGGGACAG

Downstream 100 bases:

>100_bases
CTTGAAGGCGTGCGGCTCCCGCGGCGTCCCGTTCGTGCGCAGGACACGCGTCTTGGCGGGGCTGGAATTGGCGCATAGGA
TGTCGATGTCGAGTTCCCAG

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MFLGYRNKWLCARAAAVAIMLLVAAVAHAQGSITLYGRVAGGVDYMNKIATGNGQTADLLRYGSNQWGVSLWGLRAKEDL
GDGLSAVMNLESAFSSGDGQGAGVGLFSRYAVVGLSSSTYGTLWLGRAMGLPDSEGWTVDPMGMQAISIGTLQNGRSWGS
RGNAITYASPDWGGLSFRAQAGLNGVAGNFNAGRQLAGSLSYDNGPILIKAIYEEIRDAKGEFTNLYTASRLYEAGAAYV
VGGLKLFGGYSLTRSGGATVADADNPMAANKQQQFWLGANYQVSPALTLIGGAYRAIRNNSAGNGTLLALGANYFFSKRT
LLYGTVGTVMNGGNAAFSVEAGSNRPLAGASQQGVYTGIVHRF

Sequences:

>Translated_363_residues
MFLGYRNKWLCARAAAVAIMLLVAAVAHAQGSITLYGRVAGGVDYMNKIATGNGQTADLLRYGSNQWGVSLWGLRAKEDL
GDGLSAVMNLESAFSSGDGQGAGVGLFSRYAVVGLSSSTYGTLWLGRAMGLPDSEGWTVDPMGMQAISIGTLQNGRSWGS
RGNAITYASPDWGGLSFRAQAGLNGVAGNFNAGRQLAGSLSYDNGPILIKAIYEEIRDAKGEFTNLYTASRLYEAGAAYV
VGGLKLFGGYSLTRSGGATVADADNPMAANKQQQFWLGANYQVSPALTLIGGAYRAIRNNSAGNGTLLALGANYFFSKRT
LLYGTVGTVMNGGNAAFSVEAGSNRPLAGASQQGVYTGIVHRF
>Mature_363_residues
MFLGYRNKWLCARAAAVAIMLLVAAVAHAQGSITLYGRVAGGVDYMNKIATGNGQTADLLRYGSNQWGVSLWGLRAKEDL
GDGLSAVMNLESAFSSGDGQGAGVGLFSRYAVVGLSSSTYGTLWLGRAMGLPDSEGWTVDPMGMQAISIGTLQNGRSWGS
RGNAITYASPDWGGLSFRAQAGLNGVAGNFNAGRQLAGSLSYDNGPILIKAIYEEIRDAKGEFTNLYTASRLYEAGAAYV
VGGLKLFGGYSLTRSGGATVADADNPMAANKQQQFWLGANYQVSPALTLIGGAYRAIRNNSAGNGTLLALGANYFFSKRT
LLYGTVGTVMNGGNAAFSVEAGSNRPLAGASQQGVYTGIVHRF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 37893; Mature: 37893

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLGYRNKWLCARAAAVAIMLLVAAVAHAQGSITLYGRVAGGVDYMNKIATGNGQTADLL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHCCCCCCHHHHH
RYGSNQWGVSLWGLRAKEDLGDGLSAVMNLESAFSSGDGQGAGVGLFSRYAVVGLSSSTY
HCCCCCCCEEEEEECCHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEEEECCCCC
GTLWLGRAMGLPDSEGWTVDPMGMQAISIGTLQNGRSWGSRGNAITYASPDWGGLSFRAQ
EEEEEHHCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCCCEEEEEC
AGLNGVAGNFNAGRQLAGSLSYDNGPILIKAIYEEIRDAKGEFTNLYTASRLYEAGAAYV
CCCCCCCCCCCCCHHHCCCCCCCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEE
VGGLKLFGGYSLTRSGGATVADADNPMAANKQQQFWLGANYQVSPALTLIGGAYRAIRNN
EECEEEECCEEEECCCCCEEECCCCCCCCCCCCEEEECCCEEECCHHEEHHHHHHHHHCC
SAGNGTLLALGANYFFSKRTLLYGTVGTVMNGGNAAFSVEAGSNRPLAGASQQGVYTGIV
CCCCCEEEEEECCEEEECCEEEEEEHHHEECCCCEEEEEECCCCCCCCCCCCCCCEEHHE
HRF
ECC
>Mature Secondary Structure
MFLGYRNKWLCARAAAVAIMLLVAAVAHAQGSITLYGRVAGGVDYMNKIATGNGQTADLL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHCCCCCCHHHHH
RYGSNQWGVSLWGLRAKEDLGDGLSAVMNLESAFSSGDGQGAGVGLFSRYAVVGLSSSTY
HCCCCCCCEEEEEECCHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEEEECCCCC
GTLWLGRAMGLPDSEGWTVDPMGMQAISIGTLQNGRSWGSRGNAITYASPDWGGLSFRAQ
EEEEEHHCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCCCEEEEEC
AGLNGVAGNFNAGRQLAGSLSYDNGPILIKAIYEEIRDAKGEFTNLYTASRLYEAGAAYV
CCCCCCCCCCCCCHHHCCCCCCCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEE
VGGLKLFGGYSLTRSGGATVADADNPMAANKQQQFWLGANYQVSPALTLIGGAYRAIRNN
EECEEEECCEEEECCCCCEEECCCCCCCCCCCCEEEECCCEEECCHHEEHHHHHHHHHCC
SAGNGTLLALGANYFFSKRTLLYGTVGTVMNGGNAAFSVEAGSNRPLAGASQQGVYTGIV
CCCCCEEEEEECCEEEECCEEEEEEHHHEECCCCEEEEEECCCCCCCCCCCCCCCEEHHE
HRF
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]