| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is 73540823
Identifier: 73540823
GI number: 73540823
Start: 1213090
End: 1213740
Strand: Reverse
Name: 73540823
Synonym: Reut_A1121
Alternate gene names: NA
Gene position: 1213740-1213090 (Counterclockwise)
Preceding gene: 73540829
Following gene: 73540822
Centisome position: 31.89
GC content: 72.5
Gene sequence:
>651_bases ATGAGCCTGACCCTGCCCTCCCGGCGCTTCGCCCCGGCGCGCCACGCCATGACCGCACTGGCCGTGCTTGCCGCGCTGGC AGGCACCGCCCATGCGCAGAACGGCCCGCTGTCCCTGGCAGCCCCGACCGCGCCGCCTTCGGGCCCGCGCTCGGCAGATC CCGGCATGGACAAGGCCGAACGCGCCGCCGCCGGCAAACGCTACGACGAAGCCATCTCCGGCTTCGACCGCGTGCTGGCC GCCAATCCGCGCAACGCGCAGGCCCGTTTCGAACGTGCCTGGGCCATGGCCCAGGCCGGACGCGAGGACCAGGCAATCCA GGCGTTCGCCGAGATGGCGCAGGACTTTCCGGAGCTGCCCGAGCCGCACAACAACCTGGCGCTGCTCTACGCAAAGCGCG GCGACCTGAAGCGCGCCGAGGCCGAACTGCTGCTGGCCACGGAGGTGAAGCCGGACTTCGCCATCGGGTACACCAACCTT GGCGACGTCTACCGCCGCCTGGCCGAGCAGTCCTATGCCGAAGCGCTGCGCCGCAACCCCGGCGATACGCGCGCCGGCGC TGCAATGCGGCAGTTGCGGCCGGCCGGAAGCCAGCCGAAGCCAGCCATCCCGTCGGTGACCGCCCCGGCCAGTGCTCCCG CCGCGCGCTGA
Upstream 100 bases:
>100_bases ACGGCTGCCCGGCACGCACACGGTGCCGCGGCGCGCACGTGCGTCGTGCCGGCGGTGGCGCTTTGCTAGAATGCCGCGGA GTATAACGGACCCATTCTCG
Downstream 100 bases:
>100_bases TACCCGCCACCAGACATTGCCTGTTCCGCTGCCGGGCTGCCAAGGCCCGGCAATCACCAATCTACCGGAGCTTCAGTCAT GATCCGTTCCCGCCGCATCC
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Family Protein; Signal Peptide Protein; Tpr Repeat-Containing Protein; Tetratricopeptide TPR_1 Repeat-Containing Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Repeat Protein; TPR Domain-Containing Protein; Exported Protein
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MSLTLPSRRFAPARHAMTALAVLAALAGTAHAQNGPLSLAAPTAPPSGPRSADPGMDKAERAAAGKRYDEAISGFDRVLA ANPRNAQARFERAWAMAQAGREDQAIQAFAEMAQDFPELPEPHNNLALLYAKRGDLKRAEAELLLATEVKPDFAIGYTNL GDVYRRLAEQSYAEALRRNPGDTRAGAAMRQLRPAGSQPKPAIPSVTAPASAPAAR
Sequences:
>Translated_216_residues MSLTLPSRRFAPARHAMTALAVLAALAGTAHAQNGPLSLAAPTAPPSGPRSADPGMDKAERAAAGKRYDEAISGFDRVLA ANPRNAQARFERAWAMAQAGREDQAIQAFAEMAQDFPELPEPHNNLALLYAKRGDLKRAEAELLLATEVKPDFAIGYTNL GDVYRRLAEQSYAEALRRNPGDTRAGAAMRQLRPAGSQPKPAIPSVTAPASAPAAR >Mature_215_residues SLTLPSRRFAPARHAMTALAVLAALAGTAHAQNGPLSLAAPTAPPSGPRSADPGMDKAERAAAGKRYDEAISGFDRVLAA NPRNAQARFERAWAMAQAGREDQAIQAFAEMAQDFPELPEPHNNLALLYAKRGDLKRAEAELLLATEVKPDFAIGYTNLG DVYRRLAEQSYAEALRRNPGDTRAGAAMRQLRPAGSQPKPAIPSVTAPASAPAAR
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22932; Mature: 22801
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTLPSRRFAPARHAMTALAVLAALAGTAHAQNGPLSLAAPTAPPSGPRSADPGMDKAE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCHHH RAAAGKRYDEAISGFDRVLAANPRNAQARFERAWAMAQAGREDQAIQAFAEMAQDFPELP HHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC EPHNNLALLYAKRGDLKRAEAELLLATEVKPDFAIGYTNLGDVYRRLAEQSYAEALRRNP CCCCCEEEEEECCCCCHHHHHHHHHEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCC GDTRAGAAMRQLRPAGSQPKPAIPSVTAPASAPAAR CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SLTLPSRRFAPARHAMTALAVLAALAGTAHAQNGPLSLAAPTAPPSGPRSADPGMDKAE CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCHHH RAAAGKRYDEAISGFDRVLAANPRNAQARFERAWAMAQAGREDQAIQAFAEMAQDFPELP HHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC EPHNNLALLYAKRGDLKRAEAELLLATEVKPDFAIGYTNLGDVYRRLAEQSYAEALRRNP CCCCCEEEEEECCCCCHHHHHHHHHEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCC GDTRAGAAMRQLRPAGSQPKPAIPSVTAPASAPAAR CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA