| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is amiC [H]
Identifier: 73540689
GI number: 73540689
Start: 1074351
End: 1075607
Strand: Direct
Name: amiC [H]
Synonym: Reut_A0986
Alternate gene names: 73540689
Gene position: 1074351-1075607 (Clockwise)
Preceding gene: 73540688
Following gene: 73540690
Centisome position: 28.22
GC content: 61.58
Gene sequence:
>1257_bases ATGAAACGACGTGACATGCTGAAGCTGTCGGCGGTAGCCGCCGCGGCGATGATCAGCGCCAGCCCGCTGGCGATGGCGCA GTCCAAGGAACCGATCAAGGTCGGCATCCTCCATTCGCTGTCGGGCACCATGGCCATTTCGGAGACGTCGCTCAAGGACG TGGCCCTGATGACCATCGACGAGATCAACAAGAGCGGCGGCGTGCTCGGCCGCAAGCTCGAGCCCGTGGTCGTGGATCCG GCATCAAACTGGCCGCTGTTCGCCGAGAAGGCGCGCCAGCTGATTACCAAGGACAAGGTCGCTGTCACGTTCGGCTGCTG GACTTCGGTGTCGCGCAAGTCGGTGCTGCCGGTCTACGAGGAACTGAACTCGCTGCTGTTCTACCCCGTGCAGTATGAAG GCGAGGAGATGTCCAAGAACGTCTTCTACACCGGCGCGGCGCCCAACCAGCAGGCCATCCCGGCGGTCGAGTACCTGATG AGCAAGGAAGGTGGCGGCGCGAAGCGCTTCTTCCTGCTTGGCACCGACTACGTCTACCCGCGCACCACCAACAAGATCCT GCGCGCGTTCCTGAAGAGCAAGGGCGTGGCGGACAAGGATATCGAAGAGGTCTACACGCCGTTCGGCCACAGCGACTACC AGACCATCGTCGCGAATATCAAGAAGTTCTCGCAGGGCGGAAAAACGGCTGTGATCTCGACCATCAACGGTGACTCCAAC GTGCCGTTCTACAAGGAGCTCGGCAACGCCGGCCTGAAGGCCAAGGACGTGCCGGTGGTGGCCTTCTCGGTGGGTGAGGA AGAACTGCGCGGCATCGACACCAAGCCGCTGGTCGGCCACCTGGCCGCATGGAACTACTTCATGTCGGTCAAGAACCCCG AGAACGAAGCGTTCAAGAAGCAATGGGCGGCATGGGTCAAGGCGAACAACCTTCCTGGTGGCGACAAGCGCGTGACCAAT GACCCGATGGAAGCCACTTACGTCGGCATCCACATGTGGGCGCAGGCCGTGAAGAAGGCCGGCACGACCGATCCGGACAA GGTCCGCGCGGCCATGTATGGCCAGACTTTCAAGGCACCGGACGGCTTCACGCTGACCATGGGCGACAACCATCATCTGT ACAAGCCGGTGATGATTGGCGAGGTTAAGGGCGACGGCCAGTTCACGGTGGTGTGGAAGACCGCGAAGCCGATCCGCGCG CAGCCTTGGAGCCCGTTCATCTCCGGCAATGAAGGCAAGCCGGACAAGGTGATGTAA
Upstream 100 bases:
>100_bases GTCGTCTTCCGCCGTCTCGGTACGCCATGGCACGCTAGTTGCAGATGCATCACCCGGGGTGCGTTGAGTCCCGTAACCAA ACGACAAACTGGGAGCTGCA
Downstream 100 bases:
>100_bases GGCAGCCAGTCGCTGCACCCCTGGCAGGCGCGCTCCGCCGGCTGACCGTTGCCGGCTGGCGGTGGTGCGCGCCTGACCGG GCCTGGGGGGGTCCCCGAAA
Product: twin-arginine translocation pathway signal
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MKRRDMLKLSAVAAAAMISASPLAMAQSKEPIKVGILHSLSGTMAISETSLKDVALMTIDEINKSGGVLGRKLEPVVVDP ASNWPLFAEKARQLITKDKVAVTFGCWTSVSRKSVLPVYEELNSLLFYPVQYEGEEMSKNVFYTGAAPNQQAIPAVEYLM SKEGGGAKRFFLLGTDYVYPRTTNKILRAFLKSKGVADKDIEEVYTPFGHSDYQTIVANIKKFSQGGKTAVISTINGDSN VPFYKELGNAGLKAKDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFMSVKNPENEAFKKQWAAWVKANNLPGGDKRVTN DPMEATYVGIHMWAQAVKKAGTTDPDKVRAAMYGQTFKAPDGFTLTMGDNHHLYKPVMIGEVKGDGQFTVVWKTAKPIRA QPWSPFISGNEGKPDKVM
Sequences:
>Translated_418_residues MKRRDMLKLSAVAAAAMISASPLAMAQSKEPIKVGILHSLSGTMAISETSLKDVALMTIDEINKSGGVLGRKLEPVVVDP ASNWPLFAEKARQLITKDKVAVTFGCWTSVSRKSVLPVYEELNSLLFYPVQYEGEEMSKNVFYTGAAPNQQAIPAVEYLM SKEGGGAKRFFLLGTDYVYPRTTNKILRAFLKSKGVADKDIEEVYTPFGHSDYQTIVANIKKFSQGGKTAVISTINGDSN VPFYKELGNAGLKAKDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFMSVKNPENEAFKKQWAAWVKANNLPGGDKRVTN DPMEATYVGIHMWAQAVKKAGTTDPDKVRAAMYGQTFKAPDGFTLTMGDNHHLYKPVMIGEVKGDGQFTVVWKTAKPIRA QPWSPFISGNEGKPDKVM >Mature_418_residues MKRRDMLKLSAVAAAAMISASPLAMAQSKEPIKVGILHSLSGTMAISETSLKDVALMTIDEINKSGGVLGRKLEPVVVDP ASNWPLFAEKARQLITKDKVAVTFGCWTSVSRKSVLPVYEELNSLLFYPVQYEGEEMSKNVFYTGAAPNQQAIPAVEYLM SKEGGGAKRFFLLGTDYVYPRTTNKILRAFLKSKGVADKDIEEVYTPFGHSDYQTIVANIKKFSQGGKTAVISTINGDSN VPFYKELGNAGLKAKDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFMSVKNPENEAFKKQWAAWVKANNLPGGDKRVTN DPMEATYVGIHMWAQAVKKAGTTDPDKVRAAMYGQTFKAPDGFTLTMGDNHHLYKPVMIGEVKGDGQFTVVWKTAKPIRA QPWSPFISGNEGKPDKVM
Specific function: Negatively regulates the expression of the aliphatic amidase operon. AmiC functions by inhibiting the action of AmiR at the protein level. It exhibits protein kinase activity [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000709 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45827; Mature: 45827
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRRDMLKLSAVAAAAMISASPLAMAQSKEPIKVGILHSLSGTMAISETSLKDVALMTID CCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEEEECCCCCEEEECCCCCCEEEEEHH EINKSGGVLGRKLEPVVVDPASNWPLFAEKARQLITKDKVAVTFGCWTSVSRKSVLPVYE HHCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHH ELNSLLFYPVQYEGEEMSKNVFYTGAAPNQQAIPAVEYLMSKEGGGAKRFFLLGTDYVYP HCCCCEEEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCEECC RTTNKILRAFLKSKGVADKDIEEVYTPFGHSDYQTIVANIKKFSQGGKTAVISTINGDSN CCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCC VPFYKELGNAGLKAKDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFMSVKNPENEAFKK CCHHHHHCCCCCCCCCCCEEEEECCHHHHHCCCCCCHHHHHHHHHEEEEECCCCHHHHHH QWAAWVKANNLPGGDKRVTNDPMEATYVGIHMWAQAVKKAGTTDPDKVRAAMYGQTFKAP HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEECCC DGFTLTMGDNHHLYKPVMIGEVKGDGQFTVVWKTAKPIRAQPWSPFISGNEGKPDKVM CCEEEEECCCCEEECCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKRRDMLKLSAVAAAAMISASPLAMAQSKEPIKVGILHSLSGTMAISETSLKDVALMTID CCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEEEECCCCCEEEECCCCCCEEEEEHH EINKSGGVLGRKLEPVVVDPASNWPLFAEKARQLITKDKVAVTFGCWTSVSRKSVLPVYE HHCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHH ELNSLLFYPVQYEGEEMSKNVFYTGAAPNQQAIPAVEYLMSKEGGGAKRFFLLGTDYVYP HCCCCEEEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCEECC RTTNKILRAFLKSKGVADKDIEEVYTPFGHSDYQTIVANIKKFSQGGKTAVISTINGDSN CCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCC VPFYKELGNAGLKAKDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFMSVKNPENEAFKK CCHHHHHCCCCCCCCCCCEEEEECCHHHHHCCCCCCHHHHHHHHHEEEEECCCCHHHHHH QWAAWVKANNLPGGDKRVTNDPMEATYVGIHMWAQAVKKAGTTDPDKVRAAMYGQTFKAP HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEECCC DGFTLTMGDNHHLYKPVMIGEVKGDGQFTVVWKTAKPIRAQPWSPFISGNEGKPDKVM CCEEEEECCCCEEECCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1907262; 10984043; 1762155; 7813419; 10508151; 10708652 [H]