Click here to switch to the map view.

The map label for this gene is cyoA [H]

Identifier: 73540685

GI number: 73540685

Start: 1070058

End: 1071029

Strand: Direct

Name: cyoA [H]

Synonym: Reut_A0982

Alternate gene names: 73540685

Gene position: 1070058-1071029 (Clockwise)

Preceding gene: 73540684

Following gene: 73540686

Centisome position: 28.11

GC content: 61.21

Gene sequence:

>972_bases
ATGAAGAAACCCATACTGCCGCGGTGGACGCGGTCTCTGCCAGGCCTCGGCCTGCTCTTGCTGCTCGCCGGCTGCAACAT
GACGCTGCTCGACCCGAAAGGGCAGGTAGGCGTCGACATCAAAGGCATCATCCTGATCGCCACCTGGCTCATGCTGCTGG
TGGTAGTGCCGGTGATCGTCCTGACGCTGGTGTTTGCCTGGAAGTACCGTGCCAGCAACAGTTCGGCGCGCTATGAACCC
GACTGGTCGCACTCGACCGCCATTGAAGTCGTGGTGTGGCTGATTCCCTGCCTGATCATCATCGCGCTCGGCATCATCAC
GTGGAAGTCTTCGCACGACCTGGACCCGTACAAGCCGCTGGAATCCAAGCAGAAGCCGATCACCGTCGAGGCGGTCGCGA
TGAACTGGAAGTGGCTGTTCATCTATCCGGAACTGAAGATCGCGACGGTCAACCAGATCGCGTTCCCCGTGGGCACACCG
GTGAACTTCAAGATCACGTCCGATTCGATCATGAATTCGTTCTTCATCCCGCAACTGGGCAGCCAGGTTTACGCCATGGC
CGGGATGGAGACCAAGCTGCACCTGATTGCCAATGAAGCCGGAACGTATGACGGCATGTCCGCCAACTACAGCGGTGGCG
GTTTCTCGGGCATGAAGTTCAAGGCGACCGCCATGTCGAACTTCGAGTTCGACGCATGGGTTGCCAAGGTGCGCGCTTCC
GAACGTCAGCTCGCCAGCGCGGACTACAAGGTCCTCGTCAAGCCGAGCGAAGCGGAACCGGTGGCCTACTACGGCAAGGT
CGAAGACGGCCTGTTCACCGGCATCCTGCACCAGTACATGGGCAACGACGGCCACGCCATGGCCCGCGAGGGTTTTGATG
GCGGCCCGATCTGCACGTCGCGTAACACGCTCGGCGAAGAGCGGGTGTCCATGGCCACGCCGGCCAAGCCGGCGCTGGGC
GCGCAATCCTAG

Upstream 100 bases:

>100_bases
CGTCCTTCCGGTTTTCCCTCAGCCCAACGCCTCTTGCTTCCGGCATCAGGCGGTGAAGCCACGCTTTGCCCAAGCGCGGC
CTAACCAAACCAGTCGTGAC

Downstream 100 bases:

>100_bases
GAGCAATGATGTTTGGCAAATTGAGTTTGTCGGCGATTCCGTTTCATGAGCCGATCATCATGGTCGTACTGGCCGGCGTC
GCCCTCGGCGGCGCTGCGCT

Product: cytochrome o ubiquinol oxidase subunit II

Products: NA

Alternate protein names: Cytochrome o subunit 2; Cytochrome o ubiquinol oxidase subunit 2; Oxidase BO(3) subunit 2; Ubiquinol oxidase polypeptide II [H]

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MKKPILPRWTRSLPGLGLLLLLAGCNMTLLDPKGQVGVDIKGIILIATWLMLLVVVPVIVLTLVFAWKYRASNSSARYEP
DWSHSTAIEVVVWLIPCLIIIALGIITWKSSHDLDPYKPLESKQKPITVEAVAMNWKWLFIYPELKIATVNQIAFPVGTP
VNFKITSDSIMNSFFIPQLGSQVYAMAGMETKLHLIANEAGTYDGMSANYSGGGFSGMKFKATAMSNFEFDAWVAKVRAS
ERQLASADYKVLVKPSEAEPVAYYGKVEDGLFTGILHQYMGNDGHAMAREGFDGGPICTSRNTLGEERVSMATPAKPALG
AQS

Sequences:

>Translated_323_residues
MKKPILPRWTRSLPGLGLLLLLAGCNMTLLDPKGQVGVDIKGIILIATWLMLLVVVPVIVLTLVFAWKYRASNSSARYEP
DWSHSTAIEVVVWLIPCLIIIALGIITWKSSHDLDPYKPLESKQKPITVEAVAMNWKWLFIYPELKIATVNQIAFPVGTP
VNFKITSDSIMNSFFIPQLGSQVYAMAGMETKLHLIANEAGTYDGMSANYSGGGFSGMKFKATAMSNFEFDAWVAKVRAS
ERQLASADYKVLVKPSEAEPVAYYGKVEDGLFTGILHQYMGNDGHAMAREGFDGGPICTSRNTLGEERVSMATPAKPALG
AQS
>Mature_323_residues
MKKPILPRWTRSLPGLGLLLLLAGCNMTLLDPKGQVGVDIKGIILIATWLMLLVVVPVIVLTLVFAWKYRASNSSARYEP
DWSHSTAIEVVVWLIPCLIIIALGIITWKSSHDLDPYKPLESKQKPITVEAVAMNWKWLFIYPELKIATVNQIAFPVGTP
VNFKITSDSIMNSFFIPQLGSQVYAMAGMETKLHLIANEAGTYDGMSANYSGGGFSGMKFKATAMSNFEFDAWVAKVRAS
ERQLASADYKVLVKPSEAEPVAYYGKVEDGLFTGILHQYMGNDGHAMAREGFDGGPICTSRNTLGEERVSMATPAKPALG
AQS

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=303, Percent_Identity=53.7953795379538, Blast_Score=336, Evalue=1e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012141
- InterPro:   IPR010514
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- InterPro:   IPR006333 [H]

Pfam domain/function: PF00116 COX2; PF06481 COX_ARM [H]

EC number: 1.10.3.-

Molecular weight: Translated: 35380; Mature: 35380

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPILPRWTRSLPGLGLLLLLAGCNMTLLDPKGQVGVDIKGIILIATWLMLLVVVPVIV
CCCCCCCHHHHCCCCHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LTLVFAWKYRASNSSARYEPDWSHSTAIEVVVWLIPCLIIIALGIITWKSSHDLDPYKPL
HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCC
ESKQKPITVEAVAMNWKWLFIYPELKIATVNQIAFPVGTPVNFKITSDSIMNSFFIPQLG
CCCCCCEEEEEEEEEEEEEEEECCEEEEEEEEEEECCCCCEEEEEECHHHHHHHCCHHHC
SQVYAMAGMETKLHLIANEAGTYDGMSANYSGGGFSGMKFKATAMSNFEFDAWVAKVRAS
CCEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHH
ERQLASADYKVLVKPSEAEPVAYYGKVEDGLFTGILHQYMGNDGHAMAREGFDGGPICTS
HHHHHCCCEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCEECC
RNTLGEERVSMATPAKPALGAQS
CCCCCHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKKPILPRWTRSLPGLGLLLLLAGCNMTLLDPKGQVGVDIKGIILIATWLMLLVVVPVIV
CCCCCCCHHHHCCCCHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LTLVFAWKYRASNSSARYEPDWSHSTAIEVVVWLIPCLIIIALGIITWKSSHDLDPYKPL
HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCC
ESKQKPITVEAVAMNWKWLFIYPELKIATVNQIAFPVGTPVNFKITSDSIMNSFFIPQLG
CCCCCCEEEEEEEEEEEEEEEECCEEEEEEEEEEECCCCCEEEEEECHHHHHHHCCHHHC
SQVYAMAGMETKLHLIANEAGTYDGMSANYSGGGFSGMKFKATAMSNFEFDAWVAKVRAS
CCEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHH
ERQLASADYKVLVKPSEAEPVAYYGKVEDGLFTGILHQYMGNDGHAMAREGFDGGPICTS
HHHHHCCCEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCEECC
RNTLGEERVSMATPAKPALGAQS
CCCCCHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]