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The map label for this gene is yeeY [H]

Identifier: 73540604

GI number: 73540604

Start: 983557

End: 984564

Strand: Reverse

Name: yeeY [H]

Synonym: Reut_A0901

Alternate gene names: 73540604

Gene position: 984564-983557 (Counterclockwise)

Preceding gene: 73540607

Following gene: 73540603

Centisome position: 25.87

GC content: 66.67

Gene sequence:

>1008_bases
TTGCTTACGATGCTAGGAAGTTTAGGCGCAGTGGCGTATATTAAACGGCATCGCCTTAGAAGCACTCGTTCAGAATTTCT
GAATATGCCACTCTCCCTCGAATCCCTCGAAGTCCTGGACGCCATCGAGCGCAAGGGAAGCTTCGCCGCCGCCGCCCACG
AGATGGGCAAAGTGCCGTCGGCACTGACCTACGTCGTACGCAAACTCGAAGAGGACCTCGACGTCCTGCTGTTCGACCGG
CGCCGGCACCGCGCAGAACTCACGCCGGCGGGCCGTGCGCTGCTCGACGAAGGCCGCCATCTGCTGCACGCCGCGGATGA
CCTGGCGCGCCGCGTGAAGCGCCTGGCCACCGGATGGGAAGCCACGCTCACGATCGTGGTCGACGACCTGATCAACTTCC
GCGCGCTGCTGCCCGTCGTCCAGGACTTCTACGCCGAGAACACGGCCACGCGTCTGCGCTTCGCCAAGGAAGTGCTAGGC
GGCTCGTGGGACGCGCTGGTCAGCAACCGTGCCGACCTGGTGATCGGCGGCGCCTATGACGCGCCGAGCACGCAGGGCTT
CCAGATCCGGGCGCTGGGCAGCATGCCGTTCGTCTTCGCCGTGGCCGCGCATCACCCGCTCGCGACCGAAGAAGGACCGC
TGACCACCATCCAGATCGCCAGGCACCGGATCGTGGCCGTGGGCGACACCTCGCGCAACCTGCCCGCGCGAACGCATGGT
GTGCTAGCCGGCCAGGACGTGCTGGTCGTGCCGACCATGCGCGACAAGCTCGAAGCGCAGATCCGCGGCCTTGGCTGCGG
CTGGCTGCCGGCGCCTATGGCACAGCCCCATATCGAGAGCGGCGTGCTGCAGGCCCGCGAGACCGTCGAGGTGCGCGCAC
CCGGCAACTTCAAGGTGGCCTGGCGCACCAGCAATCGCGGCAAGGCGCTGCAATGGTGGGCCGACAAGCTGGAAGACCCG
CGACTCGCACAGGCGCTGCTGCAGCAGCAACCCGAGCTGGGCGGTTAA

Upstream 100 bases:

>100_bases
ACCGCGTTCTTCAGACTTTCTGATTTCAATCATTTTGATGGCCCTCCTTGTGACCCTGGATTACCAGTACCAAGCGGCAG
AGTGCTGTGGGACTGGGCGT

Downstream 100 bases:

>100_bases
GGCGCGACTGAGCGGGAAATACACGCATGACAGTATCCGCCGGCCGCTACCGCGGCCGCTTCGCCCCCTCGCCCACCGGT
CCGCTGCACATGGGTTCGCT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MLTMLGSLGAVAYIKRHRLRSTRSEFLNMPLSLESLEVLDAIERKGSFAAAAHEMGKVPSALTYVVRKLEEDLDVLLFDR
RRHRAELTPAGRALLDEGRHLLHAADDLARRVKRLATGWEATLTIVVDDLINFRALLPVVQDFYAENTATRLRFAKEVLG
GSWDALVSNRADLVIGGAYDAPSTQGFQIRALGSMPFVFAVAAHHPLATEEGPLTTIQIARHRIVAVGDTSRNLPARTHG
VLAGQDVLVVPTMRDKLEAQIRGLGCGWLPAPMAQPHIESGVLQARETVEVRAPGNFKVAWRTSNRGKALQWWADKLEDP
RLAQALLQQQPELGG

Sequences:

>Translated_335_residues
MLTMLGSLGAVAYIKRHRLRSTRSEFLNMPLSLESLEVLDAIERKGSFAAAAHEMGKVPSALTYVVRKLEEDLDVLLFDR
RRHRAELTPAGRALLDEGRHLLHAADDLARRVKRLATGWEATLTIVVDDLINFRALLPVVQDFYAENTATRLRFAKEVLG
GSWDALVSNRADLVIGGAYDAPSTQGFQIRALGSMPFVFAVAAHHPLATEEGPLTTIQIARHRIVAVGDTSRNLPARTHG
VLAGQDVLVVPTMRDKLEAQIRGLGCGWLPAPMAQPHIESGVLQARETVEVRAPGNFKVAWRTSNRGKALQWWADKLEDP
RLAQALLQQQPELGG
>Mature_335_residues
MLTMLGSLGAVAYIKRHRLRSTRSEFLNMPLSLESLEVLDAIERKGSFAAAAHEMGKVPSALTYVVRKLEEDLDVLLFDR
RRHRAELTPAGRALLDEGRHLLHAADDLARRVKRLATGWEATLTIVVDDLINFRALLPVVQDFYAENTATRLRFAKEVLG
GSWDALVSNRADLVIGGAYDAPSTQGFQIRALGSMPFVFAVAAHHPLATEEGPLTTIQIARHRIVAVGDTSRNLPARTHG
VLAGQDVLVVPTMRDKLEAQIRGLGCGWLPAPMAQPHIESGVLQARETVEVRAPGNFKVAWRTSNRGKALQWWADKLEDP
RLAQALLQQQPELGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082024, Length=285, Percent_Identity=43.1578947368421, Blast_Score=242, Evalue=2e-65,
Organism=Escherichia coli, GI1789492, Length=285, Percent_Identity=42.1052631578947, Blast_Score=206, Evalue=2e-54,
Organism=Escherichia coli, GI1787949, Length=298, Percent_Identity=34.2281879194631, Blast_Score=169, Evalue=2e-43,
Organism=Escherichia coli, GI1786713, Length=303, Percent_Identity=30.6930693069307, Blast_Score=146, Evalue=2e-36,
Organism=Escherichia coli, GI1786508, Length=287, Percent_Identity=28.5714285714286, Blast_Score=137, Evalue=7e-34,
Organism=Escherichia coli, GI145693105, Length=183, Percent_Identity=25.1366120218579, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 36885; Mature: 36885

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTMLGSLGAVAYIKRHRLRSTRSEFLNMPLSLESLEVLDAIERKGSFAAAAHEMGKVPS
CCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHH
ALTYVVRKLEEDLDVLLFDRRRHRAELTPAGRALLDEGRHLLHAADDLARRVKRLATGWE
HHHHHHHHHHHHHHEEHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCH
ATLTIVVDDLINFRALLPVVQDFYAENTATRLRFAKEVLGGSWDALVSNRADLVIGGAYD
HEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHCCCCCEEEECCCC
APSTQGFQIRALGSMPFVFAVAAHHPLATEEGPLTTIQIARHRIVAVGDTSRNLPARTHG
CCCCCCEEEEEECCCCCEEHHHCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCHHCC
VLAGQDVLVVPTMRDKLEAQIRGLGCGWLPAPMAQPHIESGVLQARETVEVRAPGNFKVA
EECCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHEEEEECCCCEEEE
WRTSNRGKALQWWADKLEDPRLAQALLQQQPELGG
EEECCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLTMLGSLGAVAYIKRHRLRSTRSEFLNMPLSLESLEVLDAIERKGSFAAAAHEMGKVPS
CCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHH
ALTYVVRKLEEDLDVLLFDRRRHRAELTPAGRALLDEGRHLLHAADDLARRVKRLATGWE
HHHHHHHHHHHHHHEEHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCH
ATLTIVVDDLINFRALLPVVQDFYAENTATRLRFAKEVLGGSWDALVSNRADLVIGGAYD
HEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHCCCCCEEEECCCC
APSTQGFQIRALGSMPFVFAVAAHHPLATEEGPLTTIQIARHRIVAVGDTSRNLPARTHG
CCCCCCEEEEEECCCCCEEHHHCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCHHCC
VLAGQDVLVVPTMRDKLEAQIRGLGCGWLPAPMAQPHIESGVLQARETVEVRAPGNFKVA
EECCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHEEEEECCCCEEEE
WRTSNRGKALQWWADKLEDPRLAQALLQQQPELGG
EEECCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]