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The map label for this gene is yddE [C]

Identifier: 73540540

GI number: 73540540

Start: 904448

End: 905308

Strand: Reverse

Name: yddE [C]

Synonym: Reut_A0837

Alternate gene names: 73540540

Gene position: 905308-904448 (Counterclockwise)

Preceding gene: 73540541

Following gene: 73540539

Centisome position: 23.78

GC content: 67.13

Gene sequence:

>861_bases
ATGACCACCTACGCGTTTCGCCTGCTCAACGTCTTCGCCGAATCCACGTTCGGCGGCAACCCGCTGTGCGTCTTCGAGGA
TGCCCGCGGCATGGACGACGCCACCATGCAGGCACTGGCGCTGCAGTTCAACCTGTCCGAAACCACCTTCATCCTGCCGT
CGGACCGCGCACATGCGCAGGTGCGGATCTTCACGCCCGGCTATGAAATGCGCTTCGCCGGACATCCCACGCTTGGTACC
GCGCATGTGGTCCGCGACCTGGTCGCAAGCGGCGACCGACTGACGCTCGAATTCAAGGCCGGCGTGGTGCCCGTTGAGGC
GAGCGGCGATGTATGGACCTTCACCGCTCCACACGCGGGCCCGCCCAAGACCGTGGCGGTCAATCTGCCCGATGCGGAAA
TGGCCGCGCTGCTGGGACTCGACGCGCACGATCTGCTGACCTCGCCGATGTGGGTCGATACCGGCGCGGATCAGTTGCTC
GTGGCTGTCCGCACCACGGCTGCCGTGCGACGTGCGCAACCGGATACGGCGCGGCTGGCAGAGTGGCCGCAGAGCAGCCT
TGGCCGCAAGACGGCCTACGTGTTCGCGTTCGACCCGACTCAGCCGGGCCGCGTGCTCGCGCGGTACTTCTTCAGCAAGC
AAGGCGGTGGCGTCGCCGAAGACCCGGGCACGGGATCAGCGTGCGCCAACCTTGGCGGCTGGTTGCTTGCCAACGCCCAT
GCGCTGCCGGCCGAGTATGAGGTCGACCAGGGTGCCGCCGTGGATCGCCCCTGCACACTGCGACTTGCCGTTACGGCGAA
TGGCGCGATCCGTGTTGGCGGCCGCGTGATCGAGATCGGCCGCGGCACTGTCACGCTGTAG

Upstream 100 bases:

>100_bases
AGTGCCATTGAACTGGCCCGCCGTTTCACCAAGAAATTGTCCATGGCACCGCGGCGGCAGGTGGCTACACTGTGAAGCTA
CCGCGCCTCCGGATGCCGTC

Downstream 100 bases:

>100_bases
CGCCGGCCTTACCCTGCAAAGATCCCCCATGGACCCGCACACCATTACCACGCTTGCTGAGCTCGAAGCGTTGTATGCCA
GGCCGGCTGCACCGTCGCTC

Product: phenazine biosynthesis PhzC/PhzF protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MTTYAFRLLNVFAESTFGGNPLCVFEDARGMDDATMQALALQFNLSETTFILPSDRAHAQVRIFTPGYEMRFAGHPTLGT
AHVVRDLVASGDRLTLEFKAGVVPVEASGDVWTFTAPHAGPPKTVAVNLPDAEMAALLGLDAHDLLTSPMWVDTGADQLL
VAVRTTAAVRRAQPDTARLAEWPQSSLGRKTAYVFAFDPTQPGRVLARYFFSKQGGGVAEDPGTGSACANLGGWLLANAH
ALPAEYEVDQGAAVDRPCTLRLAVTANGAIRVGGRVIEIGRGTVTL

Sequences:

>Translated_286_residues
MTTYAFRLLNVFAESTFGGNPLCVFEDARGMDDATMQALALQFNLSETTFILPSDRAHAQVRIFTPGYEMRFAGHPTLGT
AHVVRDLVASGDRLTLEFKAGVVPVEASGDVWTFTAPHAGPPKTVAVNLPDAEMAALLGLDAHDLLTSPMWVDTGADQLL
VAVRTTAAVRRAQPDTARLAEWPQSSLGRKTAYVFAFDPTQPGRVLARYFFSKQGGGVAEDPGTGSACANLGGWLLANAH
ALPAEYEVDQGAAVDRPCTLRLAVTANGAIRVGGRVIEIGRGTVTL
>Mature_285_residues
TTYAFRLLNVFAESTFGGNPLCVFEDARGMDDATMQALALQFNLSETTFILPSDRAHAQVRIFTPGYEMRFAGHPTLGTA
HVVRDLVASGDRLTLEFKAGVVPVEASGDVWTFTAPHAGPPKTVAVNLPDAEMAALLGLDAHDLLTSPMWVDTGADQLLV
AVRTTAAVRRAQPDTARLAEWPQSSLGRKTAYVFAFDPTQPGRVLARYFFSKQGGGVAEDPGTGSACANLGGWLLANAHA
LPAEYEVDQGAAVDRPCTLRLAVTANGAIRVGGRVIEIGRGTVTL

Specific function: Unknown

COG id: COG0384

COG function: function code R; Predicted epimerase, PhzC/PhzF homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phzF family [H]

Homologues:

Organism=Escherichia coli, GI1787737, Length=279, Percent_Identity=26.5232974910394, Blast_Score=67, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6321818, Length=240, Percent_Identity=30, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003719 [H]

Pfam domain/function: PF02567 PhzC-PhzF [H]

EC number: NA

Molecular weight: Translated: 30398; Mature: 30267

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTYAFRLLNVFAESTFGGNPLCVFEDARGMDDATMQALALQFNLSETTFILPSDRAHAQ
CCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHEEEEEEEECCCEEEEEECCCCCEE
VRIFTPGYEMRFAGHPTLGTAHVVRDLVASGDRLTLEFKAGVVPVEASGDVWTFTAPHAG
EEEECCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCEEEEECCCCEEEEECCCCC
PPKTVAVNLPDAEMAALLGLDAHDLLTSPMWVDTGADQLLVAVRTTAAVRRAQPDTARLA
CCCEEEEECCCHHHHHHHCCCHHHHHCCCEEEECCCCCEEEEEHHHHHHHHCCCCHHHHH
EWPQSSLGRKTAYVFAFDPTQPGRVLARYFFSKQGGGVAEDPGTGSACANLGGWLLANAH
CCCHHHCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCEEEECCC
ALPAEYEVDQGAAVDRPCTLRLAVTANGAIRVGGRVIEIGRGTVTL
CCCCCCCCCCCCCCCCCEEEEEEEEECCEEEECCEEEEECCCEECC
>Mature Secondary Structure 
TTYAFRLLNVFAESTFGGNPLCVFEDARGMDDATMQALALQFNLSETTFILPSDRAHAQ
CHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHEEEEEEEECCCEEEEEECCCCCEE
VRIFTPGYEMRFAGHPTLGTAHVVRDLVASGDRLTLEFKAGVVPVEASGDVWTFTAPHAG
EEEECCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCEEEEECCCCEEEEECCCCC
PPKTVAVNLPDAEMAALLGLDAHDLLTSPMWVDTGADQLLVAVRTTAAVRRAQPDTARLA
CCCEEEEECCCHHHHHHHCCCHHHHHCCCEEEECCCCCEEEEEHHHHHHHHCCCCHHHHH
EWPQSSLGRKTAYVFAFDPTQPGRVLARYFFSKQGGGVAEDPGTGSACANLGGWLLANAH
CCCHHHCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCEEEECCC
ALPAEYEVDQGAAVDRPCTLRLAVTANGAIRVGGRVIEIGRGTVTL
CCCCCCCCCCCCCCCCCEEEEEEEEECCEEEECCEEEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]