Definition Ralstonia eutropha JMP134 chromosome 1, complete sequence.
Accession NC_007347
Length 3,806,533

Click here to switch to the map view.

The map label for this gene is ybcJ [C]

Identifier: 73540535

GI number: 73540535

Start: 899468

End: 899710

Strand: Reverse

Name: ybcJ [C]

Synonym: Reut_A0832

Alternate gene names: 73540535

Gene position: 899710-899468 (Counterclockwise)

Preceding gene: 73540536

Following gene: 73540534

Centisome position: 23.64

GC content: 65.43

Gene sequence:

>243_bases
ATGGCAAAGGCAGGCAAATCGAACGTGCAGGTCATCACGTTCGAGCTCGACGGCGAATTCATTGCGCTCAATGACCTGCT
CAAGCTGGCCGGCATATGCGACAGCGGCGGCGCCGGCAAGGCGCTGGTCGCGGCCGGCGAAGTCTCGGTGGACGGCGAGC
CCGAGTCGCGCAAGACTGCGAAAATCCGCGTCGGCCAGGTGGTGAGCCTGGCCGGCATCGACATCCGGGTGGTTGCCGCC
TGA

Upstream 100 bases:

>100_bases
TCGAGCGCCATGGCTACTTCGTCGCCGACCGCAACGATTCCCAGCCGGGCAAGCCGGTATTCAACCGCATCGTCGGGTTG
AAAGACAGCTGGGGCAAGTG

Downstream 100 bases:

>100_bases
TTGCCGGTGCACGGCAGCGGCGCGGCCACCGGGAAGAATGCAGCTTCACGGAAGGACGGAACGATGCCGATCGCATTCTG
GTGTGTCCTGGTGGCAGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 80; Mature: 79

Protein sequence:

>80_residues
MAKAGKSNVQVITFELDGEFIALNDLLKLAGICDSGGAGKALVAAGEVSVDGEPESRKTAKIRVGQVVSLAGIDIRVVAA

Sequences:

>Translated_80_residues
MAKAGKSNVQVITFELDGEFIALNDLLKLAGICDSGGAGKALVAAGEVSVDGEPESRKTAKIRVGQVVSLAGIDIRVVAA
>Mature_79_residues
AKAGKSNVQVITFELDGEFIALNDLLKLAGICDSGGAGKALVAAGEVSVDGEPESRKTAKIRVGQVVSLAGIDIRVVAA

Specific function: Unknown

COG id: COG2501

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8110; Mature: 7979

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKAGKSNVQVITFELDGEFIALNDLLKLAGICDSGGAGKALVAAGEVSVDGEPESRKTA
CCCCCCCCEEEEEEEECCCEEEHHHHHHHHCCCCCCCCCEEEEEECEEEECCCCCCCCEE
KIRVGQVVSLAGIDIRVVAA
EEEECEEEEECCCEEEEEEC
>Mature Secondary Structure 
AKAGKSNVQVITFELDGEFIALNDLLKLAGICDSGGAGKALVAAGEVSVDGEPESRKTA
CCCCCCCEEEEEEEECCCEEEHHHHHHHHCCCCCCCCCEEEEEECEEEECCCCCCCCEE
KIRVGQVVSLAGIDIRVVAA
EEEECEEEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA