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The map label for this gene is pal [H]

Identifier: 73540500

GI number: 73540500

Start: 866047

End: 866559

Strand: Direct

Name: pal [H]

Synonym: Reut_A0796

Alternate gene names: 73540500

Gene position: 866047-866559 (Clockwise)

Preceding gene: 73540499

Following gene: 73540501

Centisome position: 22.75

GC content: 64.72

Gene sequence:

>513_bases
ATGCCCCAACTGATGACTAAAACCCTTGCCGTCGCCGCCCTGCTGGCCCTAGGTGCCTGCAGCTCCGGCGTGAAGCTGGA
CGACGCCGCCAATGCCGGCGCCAACAAGGGCGGCACCGGTGCCGATGCCCGCACGGTGCAGCCGGTGGACGTTTCGCGTG
ACCCGCTGAACGATCCGAACAGCCCGCTGGCCAAGCGCAGCGTGTACTTCGACTTTGATAGCTACAGCGTCAAGCCCGAA
TACCAAAGCATGCTCGGCGAGCACGCCAAGTACCTGGGCTCGAACAAGGGCCGCAAGATCCTGATCCAGGGCAATACCGA
CGAACGCGGTACCAGCGAGTACAACCTTGCCCTGGGCCAGAAGCGTGCCGAAGCGGTGCGCCGTTCGCTGGCGACCATGG
GCGTGTCCGATAGCCAGATGGAGGCCGTGAGCCTGGGCAAGGAAAAGCCGAAGTCGACGGGCCACGACGAAGCCGCCTGG
GCCGAGAACCGCCGCGCCGACATCAACTACTGA

Upstream 100 bases:

>100_bases
ACGGGCGTACCCGGCAGGTTCTGTCTCTCCAGTCCGGCGATGTCCGCGAGCCGTCCTGGGGTCCTTTCATGCAATAACGC
AATAACAGGAGTCTCTCGCC

Downstream 100 bases:

>100_bases
TCTGATCCGCGTACAGGCCATCCATGAAAGCACGCGTTTCCACCCTGTTGTGGCTTGCCGCCGTTTCCGGTGCAGCCATG
CTGCCCCTTGCTCCGGCCCG

Product: OmpA/MotB

Products: NA

Alternate protein names: OMP P6; 15 kDa peptidoglycan-associated lipoprotein; PC protein [H]

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MPQLMTKTLAVAALLALGACSSGVKLDDAANAGANKGGTGADARTVQPVDVSRDPLNDPNSPLAKRSVYFDFDSYSVKPE
YQSMLGEHAKYLGSNKGRKILIQGNTDERGTSEYNLALGQKRAEAVRRSLATMGVSDSQMEAVSLGKEKPKSTGHDEAAW
AENRRADINY

Sequences:

>Translated_170_residues
MPQLMTKTLAVAALLALGACSSGVKLDDAANAGANKGGTGADARTVQPVDVSRDPLNDPNSPLAKRSVYFDFDSYSVKPE
YQSMLGEHAKYLGSNKGRKILIQGNTDERGTSEYNLALGQKRAEAVRRSLATMGVSDSQMEAVSLGKEKPKSTGHDEAAW
AENRRADINY
>Mature_169_residues
PQLMTKTLAVAALLALGACSSGVKLDDAANAGANKGGTGADARTVQPVDVSRDPLNDPNSPLAKRSVYFDFDSYSVKPEY
QSMLGEHAKYLGSNKGRKILIQGNTDERGTSEYNLALGQKRAEAVRRSLATMGVSDSQMEAVSLGKEKPKSTGHDEAAWA
ENRRADINY

Specific function: Thought to play a role in bacterial envelope integrity. Links the outer membrane to the peptidoglycan layer [H]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1786962, Length=168, Percent_Identity=40.4761904761905, Blast_Score=117, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 18192; Mature: 18061

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01068 OMPA_1 ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQLMTKTLAVAALLALGACSSGVKLDDAANAGANKGGTGADARTVQPVDVSRDPLNDPN
CCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SPLAKRSVYFDFDSYSVKPEYQSMLGEHAKYLGSNKGRKILIQGNTDERGTSEYNLALGQ
CCCHHCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHH
KRAEAVRRSLATMGVSDSQMEAVSLGKEKPKSTGHDEAAWAENRRADINY
HHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCC
>Mature Secondary Structure 
PQLMTKTLAVAALLALGACSSGVKLDDAANAGANKGGTGADARTVQPVDVSRDPLNDPN
CHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SPLAKRSVYFDFDSYSVKPEYQSMLGEHAKYLGSNKGRKILIQGNTDERGTSEYNLALGQ
CCCHHCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHH
KRAEAVRRSLATMGVSDSQMEAVSLGKEKPKSTGHDEAAWAENRRADINY
HHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2828309; 3257200; 7542800 [H]