| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is rhlE [H]
Identifier: 73540223
GI number: 73540223
Start: 562619
End: 564139
Strand: Direct
Name: rhlE [H]
Synonym: Reut_A0517
Alternate gene names: 73540223
Gene position: 562619-564139 (Clockwise)
Preceding gene: 73540207
Following gene: 73540224
Centisome position: 14.78
GC content: 69.1
Gene sequence:
>1521_bases ATGTCTTTCTCCGAACTCGGCTTGTCCGACAAGCTTGTGCGGGCCGTGGCCGAACAGGGCTACACCACCCCCACCCCCAT CCAGGCCCAGGCAATTCCCGCCATCCTCAAAGGTGGCGACCTGCTTGCCGGCGCGCAGACCGGTACCGGCAAGACGGCAG GCTTTACGCTGCCGATGCTGCAGCTGCTGTCCGAATCGGCGCCACAGCGCCAGGGCAAGCCGGCGGTGCGCGCACTGGTG CTGACGCCGACGCGTGAACTGGCCGCGCAGGTGGAAGAAAGCGTGCGCAACTACGGCAAGTACGTGCGGTTGCGCTCGAT GGTCATGTTCGGCGGCGTGGGCATCAACCCGCAGATCGAACAGCTGCGCCGTGGCGTGGAAATCGTCGTGGCAACGCCGG GCCGCCTGCTGGATCACGTGTCCCAGCGCACGATCGACCTTTCCAGCGTGGAACTGCTGGTACTCGATGAAGCCGACCGC ATGCTCGACATGGGCTTCATCCACGACATCCGCAAGATCCTCAACGTCCTGCCGCCCAAGCGTCAGAACCTGCTGTTCTC GGCAACGTTCTCGGATGATATTCGCGCGCTGGCGGACCGCCTGCTGAACAACCCGGCATCGATCGAGGTCGCGCGCCGCA ACACCACGGCCGAAACCGTGGCGCAGCGCGTCTACCCGGTGGACCGCGAACGCAAGCGCGAACTGCTCGCCCACCTGGTG CGCGAGCATGACTGGCACCAGGTGCTGGTCTTCACGCGGACCAAGCACGGCGCCAACCGGCTCGCCGAGCAGTTGACCAA GGACGGCCTGTCCGCGCTGGCGATCCACGGCAACAAGAGCCAGTCGGCGCGCACGCGCGCGCTGTCCGAGTTCAAGGCCG GCACGCTGCGGCTGCTGGTGGCCACCGATATCGCCGCGCGCGGCATCGACATCGACCAGTTGCCGCACGTGGTCAACTTC GACCTGCCCAACGTGCCGGAAGACTACGTGCACCGCATCGGCCGTACCGGCCGCGCCGGCGCAGAGGGTGAGGCGATCTC GCTGGTCTGCGTGGACGAGCATGGCCTGCTGCGCGACATCGAACGCCTGATCAAGCGCAAGCTCGAACAGACGGTGCTGA CGGGCTTCGAAGTCGATCCGACCATCGCGGCGGAGCCGATCCAGAAGGGTCGCCAGCAGCGAGGCGGCGGGCAGGGCGGT GGACAAGGTGGTGGACGTGGCCGTGCGCAGGCAAAGCCTGCGGCGCCAGCGGCAGCCAAGCCGTCGCAGGGCCAGCCGCG TCAGCGCCCGGCCCAGAACGCACCGCGTGGCGCCAGCCAGGCCGGGGGCGAGGCAGCCCGTGGCCACGGCGGCGCAAACC GCAACGCCGGCCAGGCTCAGCCGCGCAACCCGCAACGCAACGGCGGCGGCCAGGCGCGGCCTGCTCAGGACGCCACTGGC GCCCCGGCGCGCAACAACAACCGCCGCCCGGCCTCGCAGGCCGCACTGCTTGGCGGCGCGCGGGCTAAGCCGGCGCGCTG A
Upstream 100 bases:
>100_bases ATGCCGGTCCCCCGACTGGTTTTGTGTCAGATCACCCAGGCTGCCTGCAGGCTGGCGCGCCCAGCGCCCAGCGCGCAACG GACGGCCGAAGCATTCATTC
Downstream 100 bases:
>100_bases TCCGATCGGCTATCCAACCATGAGCGCGCATCAGGCATCCGGCGACAGCGACATCCCGTTCGCAGGGCTGACGCCAGAAC TGATCCTCGATGCGCTGGAT
Product: helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 506; Mature: 505
Protein sequence:
>506_residues MSFSELGLSDKLVRAVAEQGYTTPTPIQAQAIPAILKGGDLLAGAQTGTGKTAGFTLPMLQLLSESAPQRQGKPAVRALV LTPTRELAAQVEESVRNYGKYVRLRSMVMFGGVGINPQIEQLRRGVEIVVATPGRLLDHVSQRTIDLSSVELLVLDEADR MLDMGFIHDIRKILNVLPPKRQNLLFSATFSDDIRALADRLLNNPASIEVARRNTTAETVAQRVYPVDRERKRELLAHLV REHDWHQVLVFTRTKHGANRLAEQLTKDGLSALAIHGNKSQSARTRALSEFKAGTLRLLVATDIAARGIDIDQLPHVVNF DLPNVPEDYVHRIGRTGRAGAEGEAISLVCVDEHGLLRDIERLIKRKLEQTVLTGFEVDPTIAAEPIQKGRQQRGGGQGG GQGGGRGRAQAKPAAPAAAKPSQGQPRQRPAQNAPRGASQAGGEAARGHGGANRNAGQAQPRNPQRNGGGQARPAQDATG APARNNNRRPASQAALLGGARAKPAR
Sequences:
>Translated_506_residues MSFSELGLSDKLVRAVAEQGYTTPTPIQAQAIPAILKGGDLLAGAQTGTGKTAGFTLPMLQLLSESAPQRQGKPAVRALV LTPTRELAAQVEESVRNYGKYVRLRSMVMFGGVGINPQIEQLRRGVEIVVATPGRLLDHVSQRTIDLSSVELLVLDEADR MLDMGFIHDIRKILNVLPPKRQNLLFSATFSDDIRALADRLLNNPASIEVARRNTTAETVAQRVYPVDRERKRELLAHLV REHDWHQVLVFTRTKHGANRLAEQLTKDGLSALAIHGNKSQSARTRALSEFKAGTLRLLVATDIAARGIDIDQLPHVVNF DLPNVPEDYVHRIGRTGRAGAEGEAISLVCVDEHGLLRDIERLIKRKLEQTVLTGFEVDPTIAAEPIQKGRQQRGGGQGG GQGGGRGRAQAKPAAPAAAKPSQGQPRQRPAQNAPRGASQAGGEAARGHGGANRNAGQAQPRNPQRNGGGQARPAQDATG APARNNNRRPASQAALLGGARAKPAR >Mature_505_residues SFSELGLSDKLVRAVAEQGYTTPTPIQAQAIPAILKGGDLLAGAQTGTGKTAGFTLPMLQLLSESAPQRQGKPAVRALVL TPTRELAAQVEESVRNYGKYVRLRSMVMFGGVGINPQIEQLRRGVEIVVATPGRLLDHVSQRTIDLSSVELLVLDEADRM LDMGFIHDIRKILNVLPPKRQNLLFSATFSDDIRALADRLLNNPASIEVARRNTTAETVAQRVYPVDRERKRELLAHLVR EHDWHQVLVFTRTKHGANRLAEQLTKDGLSALAIHGNKSQSARTRALSEFKAGTLRLLVATDIAARGIDIDQLPHVVNFD LPNVPEDYVHRIGRTGRAGAEGEAISLVCVDEHGLLRDIERLIKRKLEQTVLTGFEVDPTIAAEPIQKGRQQRGGGQGGG QGGGRGRAQAKPAAPAAAKPSQGQPRQRPAQNAPRGASQAGGEAARGHGGANRNAGQAQPRNPQRNGGGQARPAQDATGA PARNNNRRPASQAALLGGARAKPAR
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI301171467, Length=380, Percent_Identity=41.8421052631579, Blast_Score=280, Evalue=2e-75, Organism=Homo sapiens, GI87196351, Length=380, Percent_Identity=41.8421052631579, Blast_Score=280, Evalue=2e-75, Organism=Homo sapiens, GI301171475, Length=380, Percent_Identity=41.8421052631579, Blast_Score=280, Evalue=3e-75, Organism=Homo sapiens, GI31542656, Length=384, Percent_Identity=41.40625, Blast_Score=277, Evalue=1e-74, Organism=Homo sapiens, GI41327773, Length=363, Percent_Identity=40.495867768595, Blast_Score=276, Evalue=5e-74, Organism=Homo sapiens, GI169881239, Length=380, Percent_Identity=41.3157894736842, Blast_Score=275, Evalue=7e-74, Organism=Homo sapiens, GI13514809, Length=380, Percent_Identity=41.3157894736842, Blast_Score=275, Evalue=7e-74, Organism=Homo sapiens, GI148613856, Length=370, Percent_Identity=38.9189189189189, Blast_Score=273, Evalue=3e-73, Organism=Homo sapiens, GI38201710, Length=370, Percent_Identity=38.9189189189189, Blast_Score=273, Evalue=3e-73, Organism=Homo sapiens, GI224593278, Length=386, Percent_Identity=41.4507772020725, Blast_Score=272, Evalue=5e-73, Organism=Homo sapiens, GI20149629, Length=368, Percent_Identity=40.2173913043478, Blast_Score=271, Evalue=1e-72, Organism=Homo sapiens, GI4758138, Length=383, Percent_Identity=38.1201044386423, Blast_Score=269, Evalue=5e-72, Organism=Homo sapiens, GI262231852, Length=392, Percent_Identity=38.5204081632653, Blast_Score=268, Evalue=1e-71, Organism=Homo sapiens, GI13518015, Length=392, Percent_Identity=38.5204081632653, Blast_Score=268, Evalue=1e-71, Organism=Homo sapiens, GI216548263, Length=392, Percent_Identity=38.5204081632653, Blast_Score=268, Evalue=1e-71, Organism=Homo sapiens, GI262118318, Length=357, Percent_Identity=40.6162464985994, Blast_Score=267, Evalue=2e-71, Organism=Homo sapiens, GI55749865, Length=340, Percent_Identity=40.8823529411765, Blast_Score=262, Evalue=6e-70, Organism=Homo sapiens, GI45446747, Length=366, Percent_Identity=38.5245901639344, Blast_Score=259, Evalue=5e-69, Organism=Homo sapiens, GI45446743, Length=366, Percent_Identity=38.5245901639344, Blast_Score=259, Evalue=5e-69, Organism=Homo sapiens, GI7661920, Length=370, Percent_Identity=35.9459459459459, Blast_Score=256, Evalue=5e-68, Organism=Homo sapiens, GI41327771, Length=394, Percent_Identity=37.5634517766497, Blast_Score=254, Evalue=2e-67, Organism=Homo sapiens, GI21071032, Length=376, Percent_Identity=38.563829787234, Blast_Score=253, Evalue=2e-67, Organism=Homo sapiens, GI222352149, Length=360, Percent_Identity=39.1666666666667, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI188035877, Length=371, Percent_Identity=37.466307277628, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI51094101, Length=370, Percent_Identity=37.8378378378378, Blast_Score=241, Evalue=9e-64, Organism=Homo sapiens, GI164419743, Length=370, Percent_Identity=37.8378378378378, Blast_Score=241, Evalue=9e-64, Organism=Homo sapiens, GI41327776, Length=368, Percent_Identity=36.9565217391304, Blast_Score=229, Evalue=3e-60, Organism=Homo sapiens, GI164664518, Length=360, Percent_Identity=35, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI4503529, Length=371, Percent_Identity=35.5795148247978, Blast_Score=216, Evalue=3e-56, Organism=Homo sapiens, GI38569505, Length=370, Percent_Identity=35.1351351351351, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI83700235, Length=371, Percent_Identity=35.3099730458221, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI38569503, Length=370, Percent_Identity=35.1351351351351, Blast_Score=213, Evalue=5e-55, Organism=Homo sapiens, GI13514831, Length=371, Percent_Identity=34.5013477088949, Blast_Score=208, Evalue=1e-53, Organism=Homo sapiens, GI21040371, Length=369, Percent_Identity=33.6043360433604, Blast_Score=205, Evalue=6e-53, Organism=Homo sapiens, GI50659095, Length=373, Percent_Identity=34.0482573726542, Blast_Score=205, Evalue=1e-52, Organism=Homo sapiens, GI17505907, Length=408, Percent_Identity=33.578431372549, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI38327634, Length=370, Percent_Identity=34.3243243243243, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI4758112, Length=366, Percent_Identity=32.7868852459016, Blast_Score=199, Evalue=6e-51, Organism=Homo sapiens, GI18375623, Length=366, Percent_Identity=32.7868852459016, Blast_Score=199, Evalue=6e-51, Organism=Homo sapiens, GI41327779, Length=353, Percent_Identity=35.4107648725212, Blast_Score=192, Evalue=8e-49, Organism=Homo sapiens, GI9506931, Length=400, Percent_Identity=32.75, Blast_Score=190, Evalue=3e-48, Organism=Homo sapiens, GI8922886, Length=389, Percent_Identity=34.9614395886889, Blast_Score=189, Evalue=7e-48, Organism=Homo sapiens, GI6005743, Length=389, Percent_Identity=34.7043701799486, Blast_Score=188, Evalue=8e-48, Organism=Homo sapiens, GI13129006, Length=373, Percent_Identity=32.171581769437, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI164419732, Length=373, Percent_Identity=34.3163538873995, Blast_Score=182, Evalue=7e-46, Organism=Homo sapiens, GI62241022, Length=372, Percent_Identity=34.6774193548387, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI4826686, Length=334, Percent_Identity=32.9341317365269, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI256223453, Length=359, Percent_Identity=31.4763231197772, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI62241024, Length=350, Percent_Identity=34.8571428571429, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI9966805, Length=319, Percent_Identity=31.6614420062696, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI256773275, Length=381, Percent_Identity=32.0209973753281, Blast_Score=153, Evalue=4e-37, Organism=Homo sapiens, GI154759257, Length=457, Percent_Identity=29.5404814004376, Blast_Score=152, Evalue=8e-37, Organism=Homo sapiens, GI20336298, Length=357, Percent_Identity=32.4929971988796, Blast_Score=149, Evalue=5e-36, Organism=Escherichia coli, GI1787016, Length=388, Percent_Identity=68.8144329896907, Blast_Score=560, Evalue=1e-161, Organism=Escherichia coli, GI87082221, Length=380, Percent_Identity=42.3684210526316, Blast_Score=295, Evalue=4e-81, Organism=Escherichia coli, GI1790214, Length=357, Percent_Identity=42.5770308123249, Blast_Score=271, Evalue=7e-74, Organism=Escherichia coli, GI1787605, Length=352, Percent_Identity=42.3295454545455, Blast_Score=250, Evalue=1e-67, Organism=Escherichia coli, GI1788930, Length=361, Percent_Identity=42.1052631578947, Blast_Score=249, Evalue=3e-67, Organism=Escherichia coli, GI48994977, Length=379, Percent_Identity=26.1213720316623, Blast_Score=77, Evalue=4e-15, Organism=Caenorhabditis elegans, GI71995514, Length=377, Percent_Identity=42.1750663129974, Blast_Score=282, Evalue=2e-76, Organism=Caenorhabditis elegans, GI17510309, Length=377, Percent_Identity=42.1750663129974, Blast_Score=282, Evalue=3e-76, Organism=Caenorhabditis elegans, GI17510307, Length=377, Percent_Identity=42.1750663129974, Blast_Score=282, Evalue=3e-76, Organism=Caenorhabditis elegans, GI32565321, Length=393, Percent_Identity=38.676844783715, Blast_Score=273, Evalue=2e-73, Organism=Caenorhabditis elegans, GI115533224, Length=400, Percent_Identity=39.25, Blast_Score=268, Evalue=6e-72, Organism=Caenorhabditis elegans, GI86570094, Length=353, Percent_Identity=39.6600566572238, Blast_Score=264, Evalue=1e-70, Organism=Caenorhabditis elegans, GI71995724, Length=370, Percent_Identity=37.8378378378378, Blast_Score=263, Evalue=2e-70, Organism=Caenorhabditis elegans, GI17507121, Length=370, Percent_Identity=37.5675675675676, Blast_Score=263, Evalue=2e-70, Organism=Caenorhabditis elegans, GI71995718, Length=379, Percent_Identity=39.8416886543536, Blast_Score=258, Evalue=7e-69, Organism=Caenorhabditis elegans, GI17555296, Length=378, Percent_Identity=38.6243386243386, Blast_Score=254, Evalue=8e-68, Organism=Caenorhabditis elegans, GI17537549, Length=377, Percent_Identity=38.1962864721485, Blast_Score=247, Evalue=1e-65, Organism=Caenorhabditis elegans, GI17510559, Length=401, Percent_Identity=36.6583541147132, Blast_Score=246, Evalue=2e-65, Organism=Caenorhabditis elegans, GI71987143, Length=370, Percent_Identity=34.8648648648649, Blast_Score=244, Evalue=5e-65, Organism=Caenorhabditis elegans, GI17507879, Length=384, Percent_Identity=36.71875, Blast_Score=235, Evalue=5e-62, Organism=Caenorhabditis elegans, GI17507945, Length=381, Percent_Identity=37.5328083989501, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI17507877, Length=390, Percent_Identity=35.3846153846154, Blast_Score=232, Evalue=3e-61, Organism=Caenorhabditis elegans, GI17552114, Length=369, Percent_Identity=33.8753387533875, Blast_Score=231, Evalue=6e-61, Organism=Caenorhabditis elegans, GI71999644, Length=360, Percent_Identity=34.7222222222222, Blast_Score=222, Evalue=4e-58, Organism=Caenorhabditis elegans, GI71999646, Length=360, Percent_Identity=34.7222222222222, Blast_Score=221, Evalue=1e-57, Organism=Caenorhabditis elegans, GI17552642, Length=354, Percent_Identity=36.7231638418079, Blast_Score=220, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17507881, Length=369, Percent_Identity=35.7723577235772, Blast_Score=216, Evalue=3e-56, Organism=Caenorhabditis elegans, GI115532546, Length=378, Percent_Identity=34.9206349206349, Blast_Score=215, Evalue=4e-56, Organism=Caenorhabditis elegans, GI115532548, Length=378, Percent_Identity=34.9206349206349, Blast_Score=215, Evalue=4e-56, Organism=Caenorhabditis elegans, GI17509811, Length=356, Percent_Identity=32.3033707865169, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI71990816, Length=354, Percent_Identity=35.0282485875706, Blast_Score=202, Evalue=4e-52, Organism=Caenorhabditis elegans, GI17505370, Length=358, Percent_Identity=34.3575418994413, Blast_Score=192, Evalue=4e-49, Organism=Caenorhabditis elegans, GI71982858, Length=351, Percent_Identity=31.0541310541311, Blast_Score=188, Evalue=6e-48, Organism=Caenorhabditis elegans, GI193208216, Length=400, Percent_Identity=30.75, Blast_Score=179, Evalue=4e-45, Organism=Caenorhabditis elegans, GI193206561, Length=361, Percent_Identity=31.8559556786704, Blast_Score=174, Evalue=7e-44, Organism=Caenorhabditis elegans, GI17556951, Length=369, Percent_Identity=30.0813008130081, Blast_Score=167, Evalue=1e-41, Organism=Caenorhabditis elegans, GI17508543, Length=392, Percent_Identity=30.1020408163265, Blast_Score=167, Evalue=1e-41, Organism=Caenorhabditis elegans, GI17536103, Length=397, Percent_Identity=31.2342569269521, Blast_Score=164, Evalue=7e-41, Organism=Caenorhabditis elegans, GI17536101, Length=396, Percent_Identity=31.0606060606061, Blast_Score=163, Evalue=3e-40, Organism=Caenorhabditis elegans, GI17536099, Length=396, Percent_Identity=31.0606060606061, Blast_Score=162, Evalue=4e-40, Organism=Caenorhabditis elegans, GI25148203, Length=425, Percent_Identity=26.1176470588235, Blast_Score=158, Evalue=8e-39, Organism=Caenorhabditis elegans, GI17507641, Length=387, Percent_Identity=29.1989664082687, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17553716, Length=368, Percent_Identity=27.1739130434783, Blast_Score=144, Evalue=8e-35, Organism=Caenorhabditis elegans, GI25148291, Length=326, Percent_Identity=28.5276073619632, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI32564046, Length=374, Percent_Identity=29.4117647058824, Blast_Score=139, Evalue=4e-33, Organism=Caenorhabditis elegans, GI71997889, Length=377, Percent_Identity=25.9946949602122, Blast_Score=122, Evalue=3e-28, Organism=Caenorhabditis elegans, GI25148205, Length=349, Percent_Identity=26.3610315186246, Blast_Score=117, Evalue=1e-26, Organism=Caenorhabditis elegans, GI71982862, Length=205, Percent_Identity=31.219512195122, Blast_Score=113, Evalue=3e-25, Organism=Caenorhabditis elegans, GI71987152, Length=106, Percent_Identity=39.622641509434, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17565430, Length=388, Percent_Identity=24.4845360824742, Blast_Score=89, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17557982, Length=383, Percent_Identity=23.4986945169713, Blast_Score=87, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6325138, Length=381, Percent_Identity=42.257217847769, Blast_Score=286, Evalue=8e-78, Organism=Saccharomyces cerevisiae, GI6324217, Length=359, Percent_Identity=41.7827298050139, Blast_Score=273, Evalue=5e-74, Organism=Saccharomyces cerevisiae, GI6324778, Length=409, Percent_Identity=37.6528117359413, Blast_Score=270, Evalue=6e-73, Organism=Saccharomyces cerevisiae, GI6321856, Length=370, Percent_Identity=40.5405405405405, Blast_Score=261, Evalue=2e-70, Organism=Saccharomyces cerevisiae, GI6320224, Length=371, Percent_Identity=35.3099730458221, Blast_Score=258, Evalue=1e-69, Organism=Saccharomyces cerevisiae, GI6321360, Length=364, Percent_Identity=41.2087912087912, Blast_Score=253, Evalue=6e-68, Organism=Saccharomyces cerevisiae, GI6320041, Length=361, Percent_Identity=37.3961218836565, Blast_Score=245, Evalue=1e-65, Organism=Saccharomyces cerevisiae, GI6323021, Length=365, Percent_Identity=38.0821917808219, Blast_Score=235, Evalue=1e-62, Organism=Saccharomyces cerevisiae, GI6323947, Length=366, Percent_Identity=35.2459016393443, Blast_Score=220, Evalue=5e-58, Organism=Saccharomyces cerevisiae, GI6322912, Length=371, Percent_Identity=36.1185983827493, Blast_Score=219, Evalue=7e-58, Organism=Saccharomyces cerevisiae, GI6322323, Length=371, Percent_Identity=36.1185983827493, Blast_Score=219, Evalue=7e-58, Organism=Saccharomyces cerevisiae, GI6322427, Length=379, Percent_Identity=34.0369393139842, Blast_Score=213, Evalue=5e-56, Organism=Saccharomyces cerevisiae, GI6320119, Length=369, Percent_Identity=35.230352303523, Blast_Score=208, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6319714, Length=377, Percent_Identity=32.3607427055703, Blast_Score=204, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6321963, Length=383, Percent_Identity=34.9869451697128, Blast_Score=203, Evalue=6e-53, Organism=Saccharomyces cerevisiae, GI6320449, Length=389, Percent_Identity=33.1619537275064, Blast_Score=202, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6324620, Length=361, Percent_Identity=34.0720221606648, Blast_Score=199, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6321111, Length=350, Percent_Identity=31.4285714285714, Blast_Score=174, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6320400, Length=397, Percent_Identity=30.9823677581864, Blast_Score=171, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6321267, Length=356, Percent_Identity=30.6179775280899, Blast_Score=164, Evalue=3e-41, Organism=Saccharomyces cerevisiae, GI6319618, Length=409, Percent_Identity=29.8288508557457, Blast_Score=162, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6320173, Length=219, Percent_Identity=36.5296803652968, Blast_Score=155, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6323306, Length=451, Percent_Identity=27.0509977827051, Blast_Score=152, Evalue=8e-38, Organism=Saccharomyces cerevisiae, GI6322876, Length=420, Percent_Identity=27.6190476190476, Blast_Score=136, Evalue=8e-33, Organism=Saccharomyces cerevisiae, GI6324366, Length=424, Percent_Identity=25.2358490566038, Blast_Score=125, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6321374, Length=199, Percent_Identity=29.1457286432161, Blast_Score=80, Evalue=5e-16, Organism=Drosophila melanogaster, GI24584399, Length=350, Percent_Identity=41.4285714285714, Blast_Score=280, Evalue=2e-75, Organism=Drosophila melanogaster, GI24642151, Length=365, Percent_Identity=40, Blast_Score=277, Evalue=1e-74, Organism=Drosophila melanogaster, GI17985987, Length=389, Percent_Identity=41.6452442159383, Blast_Score=273, Evalue=2e-73, Organism=Drosophila melanogaster, GI21355075, Length=365, Percent_Identity=38.3561643835616, Blast_Score=272, Evalue=4e-73, Organism=Drosophila melanogaster, GI18857967, Length=376, Percent_Identity=38.2978723404255, Blast_Score=272, Evalue=5e-73, Organism=Drosophila melanogaster, GI28574962, Length=387, Percent_Identity=38.7596899224806, Blast_Score=271, Evalue=9e-73, Organism=Drosophila melanogaster, GI24644479, Length=353, Percent_Identity=40.7932011331445, Blast_Score=271, Evalue=1e-72, Organism=Drosophila melanogaster, GI281361218, Length=353, Percent_Identity=40.7932011331445, Blast_Score=270, Evalue=2e-72, Organism=Drosophila melanogaster, GI24644481, Length=353, Percent_Identity=40.7932011331445, Blast_Score=270, Evalue=2e-72, Organism=Drosophila melanogaster, GI24644483, Length=353, Percent_Identity=40.7932011331445, Blast_Score=270, Evalue=2e-72, Organism=Drosophila melanogaster, GI24644487, Length=353, Percent_Identity=40.7932011331445, Blast_Score=270, Evalue=2e-72, Organism=Drosophila melanogaster, GI45551833, Length=353, Percent_Identity=40.7932011331445, Blast_Score=270, Evalue=2e-72, Organism=Drosophila melanogaster, GI24644485, Length=353, Percent_Identity=40.7932011331445, Blast_Score=270, Evalue=2e-72, Organism=Drosophila melanogaster, GI24585582, Length=384, Percent_Identity=38.8020833333333, Blast_Score=267, Evalue=2e-71, Organism=Drosophila melanogaster, GI24662330, Length=352, Percent_Identity=41.4772727272727, Blast_Score=266, Evalue=2e-71, Organism=Drosophila melanogaster, GI24584994, Length=393, Percent_Identity=37.6590330788804, Blast_Score=259, Evalue=4e-69, Organism=Drosophila melanogaster, GI17977678, Length=375, Percent_Identity=37.8666666666667, Blast_Score=257, Evalue=1e-68, Organism=Drosophila melanogaster, GI24645031, Length=370, Percent_Identity=36.4864864864865, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI21356161, Length=363, Percent_Identity=40.2203856749311, Blast_Score=252, Evalue=3e-67, Organism=Drosophila melanogaster, GI28575014, Length=367, Percent_Identity=35.149863760218, Blast_Score=236, Evalue=4e-62, Organism=Drosophila melanogaster, GI24583279, Length=360, Percent_Identity=35, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI24583281, Length=360, Percent_Identity=35, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI24582080, Length=370, Percent_Identity=34.8648648648649, Blast_Score=225, Evalue=7e-59, Organism=Drosophila melanogaster, GI24582078, Length=370, Percent_Identity=34.8648648648649, Blast_Score=225, Evalue=7e-59, Organism=Drosophila melanogaster, GI17136248, Length=370, Percent_Identity=34.8648648648649, Blast_Score=225, Evalue=7e-59, Organism=Drosophila melanogaster, GI24582075, Length=370, Percent_Identity=34.8648648648649, Blast_Score=225, Evalue=7e-59, Organism=Drosophila melanogaster, GI17136814, Length=358, Percent_Identity=39.3854748603352, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI281365720, Length=314, Percent_Identity=38.8535031847134, Blast_Score=219, Evalue=2e-57, Organism=Drosophila melanogaster, GI28571808, Length=368, Percent_Identity=33.4239130434783, Blast_Score=204, Evalue=1e-52, Organism=Drosophila melanogaster, GI28571809, Length=368, Percent_Identity=33.4239130434783, Blast_Score=204, Evalue=1e-52, Organism=Drosophila melanogaster, GI24581954, Length=351, Percent_Identity=32.4786324786325, Blast_Score=193, Evalue=2e-49, Organism=Drosophila melanogaster, GI24581952, Length=351, Percent_Identity=32.4786324786325, Blast_Score=193, Evalue=2e-49, Organism=Drosophila melanogaster, GI24581956, Length=351, Percent_Identity=32.4786324786325, Blast_Score=193, Evalue=2e-49, Organism=Drosophila melanogaster, GI24642822, Length=377, Percent_Identity=32.6259946949602, Blast_Score=189, Evalue=3e-48, Organism=Drosophila melanogaster, GI20130173, Length=459, Percent_Identity=30.718954248366, Blast_Score=186, Evalue=4e-47, Organism=Drosophila melanogaster, GI24666101, Length=364, Percent_Identity=34.6153846153846, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI17647335, Length=358, Percent_Identity=30.4469273743017, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI21355559, Length=385, Percent_Identity=35.0649350649351, Blast_Score=179, Evalue=3e-45, Organism=Drosophila melanogaster, GI24643725, Length=394, Percent_Identity=29.9492385786802, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI24668515, Length=336, Percent_Identity=30.0595238095238, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI24640164, Length=377, Percent_Identity=27.0557029177719, Blast_Score=145, Evalue=8e-35, Organism=Drosophila melanogaster, GI17136666, Length=409, Percent_Identity=30.0733496332518, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI19920478, Length=348, Percent_Identity=29.5977011494253, Blast_Score=134, Evalue=2e-31, Organism=Drosophila melanogaster, GI18859659, Length=198, Percent_Identity=35.3535353535354, Blast_Score=132, Evalue=5e-31, Organism=Drosophila melanogaster, GI28571338, Length=198, Percent_Identity=35.3535353535354, Blast_Score=132, Evalue=5e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 54368; Mature: 54236
Theoretical pI: Translated: 11.13; Mature: 11.13
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFSELGLSDKLVRAVAEQGYTTPTPIQAQAIPAILKGGDLLAGAQTGTGKTAGFTLPML CCHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHH QLLSESAPQRQGKPAVRALVLTPTRELAAQVEESVRNYGKYVRLRSMVMFGGVGINPQIE HHHHHCCCCCCCCHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH QLRRGVEIVVATPGRLLDHVSQRTIDLSSVELLVLDEADRMLDMGFIHDIRKILNVLPPK HHHCCCEEEEECCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCC RQNLLFSATFSDDIRALADRLLNNPASIEVARRNTTAETVAQRVYPVDRERKRELLAHLV CCCEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHH REHDWHQVLVFTRTKHGANRLAEQLTKDGLSALAIHGNKSQSARTRALSEFKAGTLRLLV HCCCCEEEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEE ATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGAEGEAISLVCVDEHGLLRDI EHHHHHCCCCHHHCCCEEECCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHH ERLIKRKLEQTVLTGFEVDPTIAAEPIQKGRQQRGGGQGGGQGGGRGRAQAKPAAPAAAK HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC PSQGQPRQRPAQNAPRGASQAGGEAARGHGGANRNAGQAQPRNPQRNGGGQARPAQDATG CCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APARNNNRRPASQAALLGGARAKPAR CCCCCCCCCCHHHHHHHCCCCCCCCC >Mature Secondary Structure SFSELGLSDKLVRAVAEQGYTTPTPIQAQAIPAILKGGDLLAGAQTGTGKTAGFTLPML CHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHH QLLSESAPQRQGKPAVRALVLTPTRELAAQVEESVRNYGKYVRLRSMVMFGGVGINPQIE HHHHHCCCCCCCCHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH QLRRGVEIVVATPGRLLDHVSQRTIDLSSVELLVLDEADRMLDMGFIHDIRKILNVLPPK HHHCCCEEEEECCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCC RQNLLFSATFSDDIRALADRLLNNPASIEVARRNTTAETVAQRVYPVDRERKRELLAHLV CCCEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHH REHDWHQVLVFTRTKHGANRLAEQLTKDGLSALAIHGNKSQSARTRALSEFKAGTLRLLV HCCCCEEEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEE ATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGAEGEAISLVCVDEHGLLRDI EHHHHHCCCCHHHCCCEEECCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHH ERLIKRKLEQTVLTGFEVDPTIAAEPIQKGRQQRGGGQGGGQGGGRGRAQAKPAAPAAAK HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC PSQGQPRQRPAQNAPRGASQAGGEAARGHGGANRNAGQAQPRNPQRNGGGQARPAQDATG CCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APARNNNRRPASQAALLGGARAKPAR CCCCCCCCCCHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]