| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is pdxA
Identifier: 73540205
GI number: 73540205
Start: 543248
End: 544291
Strand: Direct
Name: pdxA
Synonym: Reut_A0499
Alternate gene names: 73540205
Gene position: 543248-544291 (Clockwise)
Preceding gene: 73540204
Following gene: 73540206
Centisome position: 14.27
GC content: 69.83
Gene sequence:
>1044_bases ATGCCCGACCCGCTTGCGCTAGCCATTTCTACCGGTGAACCCGCCGGTATCGGCCCTGACATCACCATCGGGGCGCTGCT GCAACTCGCGGGTCAGAACGGGCACGCCCGTTACCATGTGCTTGGTGATGCGCACCTGCTGGCCTCCCGGGCCGCGGCGC TGGGCGTTGCGCATGCGTGGGAGCGCCGCATCGCCGAGGGCGAAGTGGTCATCCATCATGTGCCGTTGGCCGTCGCGTGC GAGCCGGGCCGGCTCGATGCGCGCAACGGTCCCTATGTGCTGTCGATGCTCGATGCCGCGATTGCGGGCTGCCGCACGCA TGCCGGCGCACCGGCGCGCTTTGCCGCCATGGTCACGGCGCCCGTGCAGAAGAGCACGATCAACGATGCCGGCGTGCCGT TCACCGGCCATACCGAATACCTCGCCGAAGCCGCGGGCGTACCGCGCGTGGTGATGATGCTGGCCGGCCCGCAGCCGGCG CACGCCAACGCCATGCTGCGCGTGGCGCTGGCCACGACCCACCTGCCGCTGCGCGCCGTGGCCGACGCCGTGACGGTGCC GCTGCTGCTGGAGACGCTGTCGATCATCGACGCCGACCTGCGCCGCTGGTTCGGCATTGCACGCCCCCGCATCCTGGTGA CCGGACTCAATCCCCACGCGGGAGAGAGCGGTCACATGGGTCGCGAGGAAATCAACGTCATCGAACCGGCGCTGGCGCAG GCGCGCGATGCCGGCATCGACGCGCGCGGCCCGTACCCGGCCGACACGCTGTTCCAGCCGCGCCACCTGCGCGACGCCGA CTGCGTACTGGCGATGTACCATGACCAGGGGCTCGCGCCCCTGAAGTACGGCACGTTCGGGCACGGCGTGAATATCACGC TGGGCCTGCCCTTTATCCGCACCTCGGTCGACCACGGCACCGCGCTCGACCTGGCCGGCAGCGGCCAGGCCGAGCATGGC AGCATGATCGAGGCTATCCGCAGTGCGGTCACCATGGCCGGACATGCCAACGGCAGGCATGCTTCAGCCAGGGTGCCGCA CTAG
Upstream 100 bases:
>100_bases CAGCTGCGTTCGCAGGCGTACGTCGAGTACCGCGTCAACCGACAGCGCTGAGGTACCCGCCGCCCCCGCCGCCCCCGCCG CCCCGTAGCACGACCACGAC
Downstream 100 bases:
>100_bases TGGTGTATTCCTCCATGCGTTCAAACATGCACCAGGGCCACGTGGCCCGCAAGCGATTCGGCCAGAACTTCCTGGTCGAC GATTCCATCATTCACGGCAT
Product: 4-hydroxythreonine-4-phosphate dehydrogenase
Products: NA
Alternate protein names: 4-(phosphohydroxy)-L-threonine dehydrogenase
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MPDPLALAISTGEPAGIGPDITIGALLQLAGQNGHARYHVLGDAHLLASRAAALGVAHAWERRIAEGEVVIHHVPLAVAC EPGRLDARNGPYVLSMLDAAIAGCRTHAGAPARFAAMVTAPVQKSTINDAGVPFTGHTEYLAEAAGVPRVVMMLAGPQPA HANAMLRVALATTHLPLRAVADAVTVPLLLETLSIIDADLRRWFGIARPRILVTGLNPHAGESGHMGREEINVIEPALAQ ARDAGIDARGPYPADTLFQPRHLRDADCVLAMYHDQGLAPLKYGTFGHGVNITLGLPFIRTSVDHGTALDLAGSGQAEHG SMIEAIRSAVTMAGHANGRHASARVPH
Sequences:
>Translated_347_residues MPDPLALAISTGEPAGIGPDITIGALLQLAGQNGHARYHVLGDAHLLASRAAALGVAHAWERRIAEGEVVIHHVPLAVAC EPGRLDARNGPYVLSMLDAAIAGCRTHAGAPARFAAMVTAPVQKSTINDAGVPFTGHTEYLAEAAGVPRVVMMLAGPQPA HANAMLRVALATTHLPLRAVADAVTVPLLLETLSIIDADLRRWFGIARPRILVTGLNPHAGESGHMGREEINVIEPALAQ ARDAGIDARGPYPADTLFQPRHLRDADCVLAMYHDQGLAPLKYGTFGHGVNITLGLPFIRTSVDHGTALDLAGSGQAEHG SMIEAIRSAVTMAGHANGRHASARVPH >Mature_346_residues PDPLALAISTGEPAGIGPDITIGALLQLAGQNGHARYHVLGDAHLLASRAAALGVAHAWERRIAEGEVVIHHVPLAVACE PGRLDARNGPYVLSMLDAAIAGCRTHAGAPARFAAMVTAPVQKSTINDAGVPFTGHTEYLAEAAGVPRVVMMLAGPQPAH ANAMLRVALATTHLPLRAVADAVTVPLLLETLSIIDADLRRWFGIARPRILVTGLNPHAGESGHMGREEINVIEPALAQA RDAGIDARGPYPADTLFQPRHLRDADCVLAMYHDQGLAPLKYGTFGHGVNITLGLPFIRTSVDHGTALDLAGSGQAEHGS MIEAIRSAVTMAGHANGRHASARVPH
Specific function: Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
COG id: COG1995
COG function: function code H; Pyridoxal phosphate biosynthesis protein
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pdxA family
Homologues:
Organism=Escherichia coli, GI1786237, Length=334, Percent_Identity=52.3952095808383, Blast_Score=306, Evalue=9e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PDXA_CUPPJ (Q475Q2)
Other databases:
- EMBL: CP000090 - RefSeq: YP_294725.1 - ProteinModelPortal: Q475Q2 - SMR: Q475Q2 - GeneID: 3611803 - GenomeReviews: CP000090_GR - KEGG: reu:Reut_A0499 - NMPDR: fig|264198.3.peg.1011 - HOGENOM: HBG451136 - OMA: LETAYQM - ProtClustDB: PRK01909 - BioCyc: REUT264198:REUT_A0499-MONOMER - GO: GO:0005737 - HAMAP: MF_00536 - InterPro: IPR005255 - TIGRFAMs: TIGR00557
Pfam domain/function: PF04166 PdxA
EC number: =1.1.1.262
Molecular weight: Translated: 36297; Mature: 36166
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: BINDING 137-137 BINDING 138-138 BINDING 282-282 BINDING 291-291 BINDING 300-300
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDPLALAISTGEPAGIGPDITIGALLQLAGQNGHARYHVLGDAHLLASRAAALGVAHAW CCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHH ERRIAEGEVVIHHVPLAVACEPGRLDARNGPYVLSMLDAAIAGCRTHAGAPARFAAMVTA HHHCCCCCEEEEECCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHEEEEEEC PVQKSTINDAGVPFTGHTEYLAEAAGVPRVVMMLAGPQPAHANAMLRVALATTHLPLRAV CCHHCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEHHHCCCCHHHH ADAVTVPLLLETLSIIDADLRRWFGIARPRILVTGLNPHAGESGHMGREEINVIEPALAQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH ARDAGIDARGPYPADTLFQPRHLRDADCVLAMYHDQGLAPLKYGTFGHGVNITLGLPFIR HHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEECCCCCCCEEEEEECCHHE TSVDHGTALDLAGSGQAEHGSMIEAIRSAVTMAGHANGRHASARVPH ECCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure PDPLALAISTGEPAGIGPDITIGALLQLAGQNGHARYHVLGDAHLLASRAAALGVAHAW CCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHH ERRIAEGEVVIHHVPLAVACEPGRLDARNGPYVLSMLDAAIAGCRTHAGAPARFAAMVTA HHHCCCCCEEEEECCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHEEEEEEC PVQKSTINDAGVPFTGHTEYLAEAAGVPRVVMMLAGPQPAHANAMLRVALATTHLPLRAV CCHHCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEHHHCCCCHHHH ADAVTVPLLLETLSIIDADLRRWFGIARPRILVTGLNPHAGESGHMGREEINVIEPALAQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH ARDAGIDARGPYPADTLFQPRHLRDADCVLAMYHDQGLAPLKYGTFGHGVNITLGLPFIR HHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEECCCCCCCEEEEEECCHHE TSVDHGTALDLAGSGQAEHGSMIEAIRSAVTMAGHANGRHASARVPH ECCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA