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The map label for this gene is omp32 [H]

Identifier: 73539767

GI number: 73539767

Start: 75471

End: 76562

Strand: Reverse

Name: omp32 [H]

Synonym: Reut_A0061

Alternate gene names: 73539767

Gene position: 76562-75471 (Counterclockwise)

Preceding gene: 73539768

Following gene: 73539765

Centisome position: 2.01

GC content: 62.64

Gene sequence:

>1092_bases
ATGAAGAAATCATCGGCCATCGTCCTCGCCGCCGGCAGCCTGCTGGCAGGTTCCGCTTTTGCACAGACTTCCGTCACGCT
GTACGGTATCGCTGATGTCAGCGTTCGCTACACCACCCATGCCGACGCATCGGGTCACGGCAAGACCGAACTGACCGATG
GCGCTGTGACGCAAAGCCGCTGGGGCCTCAAGGGCGCTGAAGCCCTGGGCAACAACCTGAAGGCGATCTTCCAGCTCGAA
AACGGCTACAGCCTCGACACCGGCAAGCTGAACTCGGCCAACACGCTGTTCAATCGTCAGGCCTACGTTGGCCTGAGCGG
TGACTTCGGCGCTGTCAAGCTGGGCCGCCAGTACACCGAAGGCTTTAATTTCTTCGGCGACTACGATCCGCTGACCATCG
GTAACTACACCGCCAACGCCTGGCCGTTCTTCCTGACCCAGTTCCGCGCGAACAACGTCATGAGCTACGGCGGCAAGTTC
GGCGGCCTGGACGTCGGCGCCAGCTACGGCTTCGGCGAAACCGCCGGCAGCATGACCTCCAACCAGTACTGGGGTGCCCG
TGCCGCTTACTCGTATGGCCCGTTCGGCATCGGCGGCGTGTACCAGGAAATCCGTAACCAGGCTGGCGAGCGTCAGCAAA
TGTTCGGTGCTGCCGGTAAGTACAGCATCGGCCCGGCCAAGATCTTCCTGGGCTACCTCGGCGGCAAGGACCGCACTGGC
GTGATCGACAACGGTTTCATGAACCAGTCGGCAGCCTCGACGGGCGCAGGCGCTCAGACCGCCATCACTGCTGGCGCCCT
GAACAACCCGCGTAAGGACCACCTGGGTTATGTCGGCACGACCTACCAGGCCACTCCGGCCCTGGCAGTGACCGGTGCGT
TCTACTACGACTACATCGAGAACAAGAACGGTATCGCCGGCAATGGCGGCCACCGTTACGCCGGCGTCCTGCTGGCCGAG
TACTCGCTGTCGAAGCGTACCCAAGTGTACGGCACTGTCGACTACAACCACGTCTCGGGCGGCGCGACGACCGAACTGCC
GGGCGCCAACAACCAGCTGGGCGTGGCCGCTGGTATCCGCCACATTTTCTGA

Upstream 100 bases:

>100_bases
TCCAGCGTTTTGTTAAATTTTCGCGGCGTTTACACGAAACGTAGACCCCGTGCCCCGTCGTGATCCGGCGGAGAACAGAA
CAGAACAGAAAAGGAGCACC

Downstream 100 bases:

>100_bases
TCGCTCCCCGATCAGTCAGTTGTTTGGCGAAAGGCACCTTCAGGTGCCTTTTTTTATTTGGCAGACGCAGGATGACCAAC
CGGTCCACCTGGACGTCTTC

Product: porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MKKSSAIVLAAGSLLAGSAFAQTSVTLYGIADVSVRYTTHADASGHGKTELTDGAVTQSRWGLKGAEALGNNLKAIFQLE
NGYSLDTGKLNSANTLFNRQAYVGLSGDFGAVKLGRQYTEGFNFFGDYDPLTIGNYTANAWPFFLTQFRANNVMSYGGKF
GGLDVGASYGFGETAGSMTSNQYWGARAAYSYGPFGIGGVYQEIRNQAGERQQMFGAAGKYSIGPAKIFLGYLGGKDRTG
VIDNGFMNQSAASTGAGAQTAITAGALNNPRKDHLGYVGTTYQATPALAVTGAFYYDYIENKNGIAGNGGHRYAGVLLAE
YSLSKRTQVYGTVDYNHVSGGATTELPGANNQLGVAAGIRHIF

Sequences:

>Translated_363_residues
MKKSSAIVLAAGSLLAGSAFAQTSVTLYGIADVSVRYTTHADASGHGKTELTDGAVTQSRWGLKGAEALGNNLKAIFQLE
NGYSLDTGKLNSANTLFNRQAYVGLSGDFGAVKLGRQYTEGFNFFGDYDPLTIGNYTANAWPFFLTQFRANNVMSYGGKF
GGLDVGASYGFGETAGSMTSNQYWGARAAYSYGPFGIGGVYQEIRNQAGERQQMFGAAGKYSIGPAKIFLGYLGGKDRTG
VIDNGFMNQSAASTGAGAQTAITAGALNNPRKDHLGYVGTTYQATPALAVTGAFYYDYIENKNGIAGNGGHRYAGVLLAE
YSLSKRTQVYGTVDYNHVSGGATTELPGANNQLGVAAGIRHIF
>Mature_363_residues
MKKSSAIVLAAGSLLAGSAFAQTSVTLYGIADVSVRYTTHADASGHGKTELTDGAVTQSRWGLKGAEALGNNLKAIFQLE
NGYSLDTGKLNSANTLFNRQAYVGLSGDFGAVKLGRQYTEGFNFFGDYDPLTIGNYTANAWPFFLTQFRANNVMSYGGKF
GGLDVGASYGFGETAGSMTSNQYWGARAAYSYGPFGIGGVYQEIRNQAGERQQMFGAAGKYSIGPAKIFLGYLGGKDRTG
VIDNGFMNQSAASTGAGAQTAITAGALNNPRKDHLGYVGTTYQATPALAVTGAFYYDYIENKNGIAGNGGHRYAGVLLAE
YSLSKRTQVYGTVDYNHVSGGATTELPGANNQLGVAAGIRHIF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 38179; Mature: 38179

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSSAIVLAAGSLLAGSAFAQTSVTLYGIADVSVRYTTHADASGHGKTELTDGAVTQSR
CCCCCEEEEEECCHHCCCHHHHCEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCHHH
WGLKGAEALGNNLKAIFQLENGYSLDTGKLNSANTLFNRQAYVGLSGDFGAVKLGRQYTE
CCCCHHHHHCCCEEEEEEECCCCEECCCCCCCCHHEECCEEEEEECCCCCHHHHCHHHHH
GFNFFGDYDPLTIGNYTANAWPFFLTQFRANNVMSYGGKFGGLDVGASYGFGETAGSMTS
CCCCCCCCCCEEECCCCCCCHHHHHHHHHHCCEECCCCCCCCEECCCCCCCCCCCCCCCC
NQYWGARAAYSYGPFGIGGVYQEIRNQAGERQQMFGAAGKYSIGPAKIFLGYLGGKDRTG
CCCCCCEEECCCCCCCCCHHHHHHHHHCCHHHHHHCCCCCCCCCHHHEEEEECCCCCCCC
VIDNGFMNQSAASTGAGAQTAITAGALNNPRKDHLGYVGTTYQATPALAVTGAFYYDYIE
EECCCCCCCCCCCCCCCCHHEEEECCCCCCCHHHCCEECCCCCCCCCEEEEHHEEEEECC
NKNGIAGNGGHRYAGVLLAEYSLSKRTQVYGTVDYNHVSGGATTELPGANNQLGVAAGIR
CCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEHHHHHH
HIF
HCC
>Mature Secondary Structure
MKKSSAIVLAAGSLLAGSAFAQTSVTLYGIADVSVRYTTHADASGHGKTELTDGAVTQSR
CCCCCEEEEEECCHHCCCHHHHCEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCHHH
WGLKGAEALGNNLKAIFQLENGYSLDTGKLNSANTLFNRQAYVGLSGDFGAVKLGRQYTE
CCCCHHHHHCCCEEEEEEECCCCEECCCCCCCCHHEECCEEEEEECCCCCHHHHCHHHHH
GFNFFGDYDPLTIGNYTANAWPFFLTQFRANNVMSYGGKFGGLDVGASYGFGETAGSMTS
CCCCCCCCCCEEECCCCCCCHHHHHHHHHHCCEECCCCCCCCEECCCCCCCCCCCCCCCC
NQYWGARAAYSYGPFGIGGVYQEIRNQAGERQQMFGAAGKYSIGPAKIFLGYLGGKDRTG
CCCCCCEEECCCCCCCCCHHHHHHHHHCCHHHHHHCCCCCCCCCHHHEEEEECCCCCCCC
VIDNGFMNQSAASTGAGAQTAITAGALNNPRKDHLGYVGTTYQATPALAVTGAFYYDYIE
EECCCCCCCCCCCCCCCCHHEEEECCCCCCCHHHCCEECCCCCCCCCEEEEHHEEEEECC
NKNGIAGNGGHRYAGVLLAEYSLSKRTQVYGTVDYNHVSGGATTELPGANNQLGVAAGIR
CCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEHHHHHH
HIF
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]