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The map label for this gene is oxyR [H]

Identifier: 73539582

GI number: 73539582

Start: 2585547

End: 2586455

Strand: Direct

Name: oxyR [H]

Synonym: Reut_B5762

Alternate gene names: 73539582

Gene position: 2585547-2586455 (Clockwise)

Preceding gene: 73539578

Following gene: 73539583

Centisome position: 94.84

GC content: 62.82

Gene sequence:

>909_bases
ATGCTGCCGACACTGAAACAGATACAGCACTTTGTTGCCATTGCCGAGACCGGACAGGTGTCGCGCGCCGCACAGCGCTG
CCACGTTTCGCAGTCCTCGATGACGGCATCGCTCAAGGCGCTGGAGGAGGTCGTGGGCGCGCCGCTGTTCTCGCGGCACG
CCGCCGGGGTAAAGCTGACTGCTGCGGGCATTCGCTTCTTGCGCCATGCGCAGCAGATCGACGTGGCCGTGCGCGAGGCA
GTCAGTGCGGCCGCGGTCGCCCCTGCAACGCTGACAGGCGTCGTCCGCCTCGGCGTCACAGAGACCATCACGGCATACGT
TCTGCCCAAGCTGTTGCCCGCCCTCGAACAGAAGTTTCCGCAACTGGAACTGCAGATATTGGAGCGACCGCGCGGCGATA
TCGAGGCGCATATCGAGACAGGCAAGCTCGACCTCGCTTTGCTACTGGTTTCCAACCTGCCTGAAATGCAGCACGTTGGC
TGCGAAACGCTGCTGCGCTCGGCGCGTCAGCTCTGGGGGCATCCGGACCATCCGCTGATGCAGCAGGAAGAGATAAGCCT
GTCCGACGTGGCGCAGCACGACTATATCTTGCTGGACATGGACGAACATATCGCCACCGTGATCAAGTATTGGGGACAGT
ACGGGCTTTCGCCCAGCGTGCGGCTGCAAAGCTGTTCGATCGAGGCCGTGCGCAGTCTGGTGGCGTCGGGGCGCGGCGTA
TCGATCCTCTCCGATCTCGTTTACCGACCCTGGTCGCTTGAAGGGCAGCGCATTCTGCGGCGCGGCCTTTCTGACAGGGT
GCCGTCCATGGACGTCGGATTGATCTGGCGGCTCGATGCCGGAGCAGACCCGCAGACGCAAAGCCTGCGGGAATTTTTGC
GGGTTGCGCTGAGGGAAACGCTACGCTAG

Upstream 100 bases:

>100_bases
CATCGCCAGATCCCAGCAACTTGTCTTCGAGCTGGATGCTAGCTAGCATGGAGCGTTATAGCTAATTCATAGTTTTGACA
TTGCAATATCGGAAAAATCG

Downstream 100 bases:

>100_bases
CGCCTTTACTTCGCCACCGCTCCCACATCAGTGCCTTTTGAGTCTCGGTGTAGTAGATCCTGCGCCTCTGTTTCATTTGC
AACACCTCCACTGCTCACGA

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MLPTLKQIQHFVAIAETGQVSRAAQRCHVSQSSMTASLKALEEVVGAPLFSRHAAGVKLTAAGIRFLRHAQQIDVAVREA
VSAAAVAPATLTGVVRLGVTETITAYVLPKLLPALEQKFPQLELQILERPRGDIEAHIETGKLDLALLLVSNLPEMQHVG
CETLLRSARQLWGHPDHPLMQQEEISLSDVAQHDYILLDMDEHIATVIKYWGQYGLSPSVRLQSCSIEAVRSLVASGRGV
SILSDLVYRPWSLEGQRILRRGLSDRVPSMDVGLIWRLDAGADPQTQSLREFLRVALRETLR

Sequences:

>Translated_302_residues
MLPTLKQIQHFVAIAETGQVSRAAQRCHVSQSSMTASLKALEEVVGAPLFSRHAAGVKLTAAGIRFLRHAQQIDVAVREA
VSAAAVAPATLTGVVRLGVTETITAYVLPKLLPALEQKFPQLELQILERPRGDIEAHIETGKLDLALLLVSNLPEMQHVG
CETLLRSARQLWGHPDHPLMQQEEISLSDVAQHDYILLDMDEHIATVIKYWGQYGLSPSVRLQSCSIEAVRSLVASGRGV
SILSDLVYRPWSLEGQRILRRGLSDRVPSMDVGLIWRLDAGADPQTQSLREFLRVALRETLR
>Mature_302_residues
MLPTLKQIQHFVAIAETGQVSRAAQRCHVSQSSMTASLKALEEVVGAPLFSRHAAGVKLTAAGIRFLRHAQQIDVAVREA
VSAAAVAPATLTGVVRLGVTETITAYVLPKLLPALEQKFPQLELQILERPRGDIEAHIETGKLDLALLLVSNLPEMQHVG
CETLLRSARQLWGHPDHPLMQQEEISLSDVAQHDYILLDMDEHIATVIKYWGQYGLSPSVRLQSCSIEAVRSLVASGRGV
SILSDLVYRPWSLEGQRILRRGLSDRVPSMDVGLIWRLDAGADPQTQSLREFLRVALRETLR

Specific function: Required for the induction of a regulon of hydrogen peroxide inducible genes such as catalase and glutathione- reductase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790399, Length=294, Percent_Identity=26.1904761904762, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1787879, Length=303, Percent_Identity=28.7128712871287, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI157672245, Length=236, Percent_Identity=31.7796610169492, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1788887, Length=307, Percent_Identity=24.7557003257329, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI87081904, Length=186, Percent_Identity=31.1827956989247, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1787601, Length=294, Percent_Identity=27.2108843537415, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1787806, Length=144, Percent_Identity=33.3333333333333, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788748, Length=244, Percent_Identity=23.7704918032787, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1786401, Length=258, Percent_Identity=25.1937984496124, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1789204, Length=297, Percent_Identity=23.5690235690236, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI145693105, Length=192, Percent_Identity=23.4375, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787530, Length=254, Percent_Identity=21.6535433070866, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33317; Mature: 33317

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPTLKQIQHFVAIAETGQVSRAAQRCHVSQSSMTASLKALEEVVGAPLFSRHAAGVKLT
CCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCHH
AAGIRFLRHAQQIDVAVREAVSAAAVAPATLTGVVRLGVTETITAYVLPKLLPALEQKFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QLELQILERPRGDIEAHIETGKLDLALLLVSNLPEMQHVGCETLLRSARQLWGHPDHPLM
HHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCHHHHCCHHHHHHHHHHHCCCCCCCCC
QQEEISLSDVAQHDYILLDMDEHIATVIKYWGQYGLSPSVRLQSCSIEAVRSLVASGRGV
CHHCCCHHHHHCCCEEEEECHHHHHHHHHHHHHCCCCCCCEEHHCCHHHHHHHHHCCCCH
SILSDLVYRPWSLEGQRILRRGLSDRVPSMDVGLIWRLDAGADPQTQSLREFLRVALRET
HHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
LR
CC
>Mature Secondary Structure
MLPTLKQIQHFVAIAETGQVSRAAQRCHVSQSSMTASLKALEEVVGAPLFSRHAAGVKLT
CCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCHH
AAGIRFLRHAQQIDVAVREAVSAAAVAPATLTGVVRLGVTETITAYVLPKLLPALEQKFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QLELQILERPRGDIEAHIETGKLDLALLLVSNLPEMQHVGCETLLRSARQLWGHPDHPLM
HHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCHHHHCCHHHHHHHHHHHCCCCCCCCC
QQEEISLSDVAQHDYILLDMDEHIATVIKYWGQYGLSPSVRLQSCSIEAVRSLVASGRGV
CHHCCCHHHHHCCCEEEEECHHHHHHHHHHHHHCCCCCCCEEHHCCHHHHHHHHHCCCCH
SILSDLVYRPWSLEGQRILRRGLSDRVPSMDVGLIWRLDAGADPQTQSLREFLRVALRET
HHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
LR
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA