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The map label for this gene is ymdC [H]

Identifier: 73538805

GI number: 73538805

Start: 1706602

End: 1708218

Strand: Direct

Name: ymdC [H]

Synonym: Reut_B4980

Alternate gene names: 73538805

Gene position: 1706602-1708218 (Clockwise)

Preceding gene: 73538803

Following gene: 73538806

Centisome position: 62.6

GC content: 67.22

Gene sequence:

>1617_bases
ATGCCCGCCGTCCAGGACCGCCCCCGACTGACGCATCGCTGGCAGCACCGCCTCACGGTGCTGCTGGCCACCGCGCTGCT
GCTGGCCGGCTGTGCGAGCCTGCCGCCGCAGGATGGGCGCGTAGGCACCTACGCGGTGACGCCAGCGGACACGGCCAGTA
CGCTGCTGGCCCGCACCATGGCGCCGATGCTCTCGGCGCACCCGGGCCAGTCCGGGTTCTATCCGCTCGCCAGCGGCCCG
GACGCACTAGTGGCACGCATCGCGCTGGCCAGGGCCGCGCAACGCACGCTGGACGTGCAGTATTACATCTACGACGGCGA
CCTGACCGGCAAGACGCTGCTCGCCAACATCATCGCCGCCGCAGACCGCGGCGTACGCGTGCGGCTGCTGCTCGACGACC
TGCACGTGGCCGGACAGGACCGCATCCTGTCGGCGCTCGATGACCACCCGAACATCGAAGTCCGGCTGTTCAACCCATTC
GCCTCGCGCAGCCTGCGCATGGCCGCGATGGCGCTCGACTACAGCCGGCTGAACCGCCGCATGCACAACAAGTCAATGAC
CGCCGACAACCAGCTCACGATCGTCGGCGGCCGCAATATCGGCGATGCGTATTTCTCCGCCGACAAGGGCTCGGATTTCA
CCGATCTGGACCTGCTGCTGGCGGGCCCCGTGGTGCCCGAGGTCTCGGCGGTGTTCGACGACTACTGGAACGGCGCCCCC
GCCTACCCCGTCAGTGCGCTGGTCAAGCCGCCCGAGGACGCCGCGGCGCAGCTGCAGGCCTTGCGCGACTACCTCGACAA
GCACGTCGCCGAAGCGCGCGGCGGCGAGTATTCGCAGACCCTGCTGTCCTCGGGGCTCGCGCAGGCGCTCGAAAGCGGCA
AGCTGCCCGCGTACTGGGGCCAGGCCACGGTGATTGCCGACAAGGCCGCGAAGGTCACGCTGCCGCCCGAAGACGATTCC
AGCCATGCGATTCCCAAGCTCGTGAAGCTGCTTGGCAGTGCGCAACAGGAACTGGCGCTGGTATCGCCCTATTTCGTGCC
GAACCGCAAGGCCGTCGAATGGTTTGCGCAGATGACGCAGCGCGGCGTGACGGTGCGTATCCTGACCAACTCCTTCGCTG
CGACGGATGTCAGCGCCGTGCACGCAGGTTATTCGCCGTGGCGCAAGAACCTGCTCGAAGCGGGCGTGGAACTGTACGAA
CTCAAGCCGTCCGCCTATGCGGAGATGGCGCGCGAAGGCAAGCAGGGCCACCGCAGCATGGTCAGCAAGAGCCGCGCGAG
CCTGCATGCCAAGAGCTATATGGTGGACCGGCGCCTGCTATTCGTCGGATCGCTGAACCTGGACCCGCGCTCCGCCCGGC
TCAATACGGAAATGGGCGTGGTCGTCGACAGCGCGCCGCTGTGCGTGGCACTCGGCAAGGACCTGGACCAGGCGCTGCTG
GATGTCGCCTACAAAGTCATGCTCGCGCCGGACGCCGACGGTAGTGGCTCGCATCTGGTGTGGGTCACACGCGAGAACGG
CCTGCTGCGCACCTATGACAGCGAACCGGACATGGGCGCGCTGCAGCATCTCGGACAGGGACTGCTGCGGATGTTGCCGA
TCGAAGAGGAACTGTAG

Upstream 100 bases:

>100_bases
TTCGTCGTGTATGCCTTGATAGTAGTGCAGGCCGGCGCGGGACTGGCGCGCGCTCGCAAAACGCGCTACACAGGAGGCTG
GCCGCCGCCCAGGAGATGCC

Downstream 100 bases:

>100_bases
GCGCCCGCGGGCCGCTGGAGCCGCCGGGGCCGCTGTATATAATGCGTTTCCGATTGCCGCCGCGCATCGCGGCTGACCTC
CATGGAATCCAAGACCGCCC

Product: phospholipase D/transphosphatidylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 538; Mature: 537

Protein sequence:

>538_residues
MPAVQDRPRLTHRWQHRLTVLLATALLLAGCASLPPQDGRVGTYAVTPADTASTLLARTMAPMLSAHPGQSGFYPLASGP
DALVARIALARAAQRTLDVQYYIYDGDLTGKTLLANIIAAADRGVRVRLLLDDLHVAGQDRILSALDDHPNIEVRLFNPF
ASRSLRMAAMALDYSRLNRRMHNKSMTADNQLTIVGGRNIGDAYFSADKGSDFTDLDLLLAGPVVPEVSAVFDDYWNGAP
AYPVSALVKPPEDAAAQLQALRDYLDKHVAEARGGEYSQTLLSSGLAQALESGKLPAYWGQATVIADKAAKVTLPPEDDS
SHAIPKLVKLLGSAQQELALVSPYFVPNRKAVEWFAQMTQRGVTVRILTNSFAATDVSAVHAGYSPWRKNLLEAGVELYE
LKPSAYAEMAREGKQGHRSMVSKSRASLHAKSYMVDRRLLFVGSLNLDPRSARLNTEMGVVVDSAPLCVALGKDLDQALL
DVAYKVMLAPDADGSGSHLVWVTRENGLLRTYDSEPDMGALQHLGQGLLRMLPIEEEL

Sequences:

>Translated_538_residues
MPAVQDRPRLTHRWQHRLTVLLATALLLAGCASLPPQDGRVGTYAVTPADTASTLLARTMAPMLSAHPGQSGFYPLASGP
DALVARIALARAAQRTLDVQYYIYDGDLTGKTLLANIIAAADRGVRVRLLLDDLHVAGQDRILSALDDHPNIEVRLFNPF
ASRSLRMAAMALDYSRLNRRMHNKSMTADNQLTIVGGRNIGDAYFSADKGSDFTDLDLLLAGPVVPEVSAVFDDYWNGAP
AYPVSALVKPPEDAAAQLQALRDYLDKHVAEARGGEYSQTLLSSGLAQALESGKLPAYWGQATVIADKAAKVTLPPEDDS
SHAIPKLVKLLGSAQQELALVSPYFVPNRKAVEWFAQMTQRGVTVRILTNSFAATDVSAVHAGYSPWRKNLLEAGVELYE
LKPSAYAEMAREGKQGHRSMVSKSRASLHAKSYMVDRRLLFVGSLNLDPRSARLNTEMGVVVDSAPLCVALGKDLDQALL
DVAYKVMLAPDADGSGSHLVWVTRENGLLRTYDSEPDMGALQHLGQGLLRMLPIEEEL
>Mature_537_residues
PAVQDRPRLTHRWQHRLTVLLATALLLAGCASLPPQDGRVGTYAVTPADTASTLLARTMAPMLSAHPGQSGFYPLASGPD
ALVARIALARAAQRTLDVQYYIYDGDLTGKTLLANIIAAADRGVRVRLLLDDLHVAGQDRILSALDDHPNIEVRLFNPFA
SRSLRMAAMALDYSRLNRRMHNKSMTADNQLTIVGGRNIGDAYFSADKGSDFTDLDLLLAGPVVPEVSAVFDDYWNGAPA
YPVSALVKPPEDAAAQLQALRDYLDKHVAEARGGEYSQTLLSSGLAQALESGKLPAYWGQATVIADKAAKVTLPPEDDSS
HAIPKLVKLLGSAQQELALVSPYFVPNRKAVEWFAQMTQRGVTVRILTNSFAATDVSAVHAGYSPWRKNLLEAGVELYEL
KPSAYAEMAREGKQGHRSMVSKSRASLHAKSYMVDRRLLFVGSLNLDPRSARLNTEMGVVVDSAPLCVALGKDLDQALLD
VAYKVMLAPDADGSGSHLVWVTRENGLLRTYDSEPDMGALQHLGQGLLRMLPIEEEL

Specific function: Unknown

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PLD phosphodiesterase domains [H]

Homologues:

Organism=Escherichia coli, GI87081826, Length=487, Percent_Identity=41.8891170431211, Blast_Score=344, Evalue=8e-96,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001736 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58384; Mature: 58253

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAVQDRPRLTHRWQHRLTVLLATALLLAGCASLPPQDGRVGTYAVTPADTASTLLARTM
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHH
APMLSAHPGQSGFYPLASGPDALVARIALARAAQRTLDVQYYIYDGDLTGKTLLANIIAA
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHHH
ADRGVRVRLLLDDLHVAGQDRILSALDDHPNIEVRLFNPFASRSLRMAAMALDYSRLNRR
CCCCCEEEEEEECHHHCCHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHH
MHNKSMTADNQLTIVGGRNIGDAYFSADKGSDFTDLDLLLAGPVVPEVSAVFDDYWNGAP
HHHCCCCCCCEEEEEECCCCCCHHCCCCCCCCCCCHHHEEECCCCHHHHHHHHHHCCCCC
AYPVSALVKPPEDAAAQLQALRDYLDKHVAEARGGEYSQTLLSSGLAQALESGKLPAYWG
CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCC
QATVIADKAAKVTLPPEDDSSHAIPKLVKLLGSAQQELALVSPYFVPNRKAVEWFAQMTQ
CEEEEECCCEEEECCCCCCCCCHHHHHHHHHCCHHHHHEEECCCCCCCHHHHHHHHHHHH
RGVTVRILTNSFAATDVSAVHAGYSPWRKNLLEAGVELYELKPSAYAEMAREGKQGHRSM
CCCEEEEEECCCCCCCHHHHHCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHH
VSKSRASLHAKSYMVDRRLLFVGSLNLDPRSARLNTEMGVVVDSAPLCVALGKDLDQALL
HHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCEEEECCCCEEEECCCCHHHHHH
DVAYKVMLAPDADGSGSHLVWVTRENGLLRTYDSEPDMGALQHLGQGLLRMLPIEEEL
HHHHHEEECCCCCCCCCEEEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PAVQDRPRLTHRWQHRLTVLLATALLLAGCASLPPQDGRVGTYAVTPADTASTLLARTM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHH
APMLSAHPGQSGFYPLASGPDALVARIALARAAQRTLDVQYYIYDGDLTGKTLLANIIAA
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHHH
ADRGVRVRLLLDDLHVAGQDRILSALDDHPNIEVRLFNPFASRSLRMAAMALDYSRLNRR
CCCCCEEEEEEECHHHCCHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHH
MHNKSMTADNQLTIVGGRNIGDAYFSADKGSDFTDLDLLLAGPVVPEVSAVFDDYWNGAP
HHHCCCCCCCEEEEEECCCCCCHHCCCCCCCCCCCHHHEEECCCCHHHHHHHHHHCCCCC
AYPVSALVKPPEDAAAQLQALRDYLDKHVAEARGGEYSQTLLSSGLAQALESGKLPAYWG
CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCC
QATVIADKAAKVTLPPEDDSSHAIPKLVKLLGSAQQELALVSPYFVPNRKAVEWFAQMTQ
CEEEEECCCEEEECCCCCCCCCHHHHHHHHHCCHHHHHEEECCCCCCCHHHHHHHHHHHH
RGVTVRILTNSFAATDVSAVHAGYSPWRKNLLEAGVELYELKPSAYAEMAREGKQGHRSM
CCCEEEEEECCCCCCCHHHHHCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHH
VSKSRASLHAKSYMVDRRLLFVGSLNLDPRSARLNTEMGVVVDSAPLCVALGKDLDQALL
HHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCEEEECCCCEEEECCCCHHHHHH
DVAYKVMLAPDADGSGSHLVWVTRENGLLRTYDSEPDMGALQHLGQGLLRMLPIEEEL
HHHHHEEECCCCCCCCCEEEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]