Click here to switch to the map view.

The map label for this gene is gltA [H]

Identifier: 73538784

GI number: 73538784

Start: 1688000

End: 1688848

Strand: Direct

Name: gltA [H]

Synonym: Reut_B4959

Alternate gene names: 73538784

Gene position: 1688000-1688848 (Clockwise)

Preceding gene: 73538783

Following gene: 73538788

Centisome position: 61.92

GC content: 68.43

Gene sequence:

>849_bases
ATGAGCGAGATCAATCAGGCCATGGACCCCGGCCAGCAGCTGTCCCAGGACTGGTGGCGCACGGAAATCATCGACATGCG
CCCCGGCGAAATCCGATACCGCGGCTATCCGATCGAACAGCTGATCGGCCAGGTGTCGTTCGCGCAGATGATCTGGCTGA
TGCTGCGCGGCGAGCTGCCCGGCCCGGGACAGGGCGAACTGCTCGATGCCGCATTGATGGCGGCTGTCGATCACGGCCCG
CAGGCGCCCAGCATCGCCATCGCGCGCATGGCCGCCACTTGCGGCGTCGGCCTGAACAACGCGATGGCTTCGGCCGTCAA
CGTGCTCGGTGATGTGCACGGCGGCGCAGGCGAGCAGGCTGTGGAGTTGTACCAGGACATCGCCGGGCGCATCGACGAAG
GCGCCGCTCTGGACCAGGCCGTCAGCGCCGGCCTGGCGCACTACCGCGACCTGCACGGCAGGTTCGTCTCGGGCTTCGGC
CACCGCTTTCATCCCGTGGATCCGCGTGCGCCGCGACTGCTGGCGCTGGTGGATCAGGCGGCGGAGAAAAGCGTGGTCAA
TGGCCGCTTTGCCGCGATTGCGCGGGCCGTGGAGCGCGCGCTCGGCGAAGGCCGCAGCAAGCCAGTGCCGATGAATATCG
ACGGGGCCACGGCTGTCATCTACGCGGAACTGGGGTTTCCGGCGCCGCTGGCGCGCGGGCTGTTCTGCCTGTCGCGCTCC
GTGGGCATCCTCGCGCACGCGTGGGAGCAGACACAGCAAGGCGGCCGCAACAAGGGCCCGATCCCGCGCCAGTTCCTTTG
GACCTACGACGGCACGCCGCAACGCGATGTGCCAGCGCAGGGAGACTGA

Upstream 100 bases:

>100_bases
ACACACCGCCCCCGCAGCTTGGCGAACACACACAGCAGATCCTCGCCGGCCTTGGCTACAGCGAGGCCGACATCGATACC
CTCAGACAGGAGCGCGCGGT

Downstream 100 bases:

>100_bases
CGCCGTTCAGGCCGCCGGCGTCATGATCTGGCTGTTCACGAGGACCGGCAGCGGCGCCGGCTTCTCGTCGAGCATGGCGG
ACGCCACCTCATAGCGATCG

Product: citrate synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MSEINQAMDPGQQLSQDWWRTEIIDMRPGEIRYRGYPIEQLIGQVSFAQMIWLMLRGELPGPGQGELLDAALMAAVDHGP
QAPSIAIARMAATCGVGLNNAMASAVNVLGDVHGGAGEQAVELYQDIAGRIDEGAALDQAVSAGLAHYRDLHGRFVSGFG
HRFHPVDPRAPRLLALVDQAAEKSVVNGRFAAIARAVERALGEGRSKPVPMNIDGATAVIYAELGFPAPLARGLFCLSRS
VGILAHAWEQTQQGGRNKGPIPRQFLWTYDGTPQRDVPAQGD

Sequences:

>Translated_282_residues
MSEINQAMDPGQQLSQDWWRTEIIDMRPGEIRYRGYPIEQLIGQVSFAQMIWLMLRGELPGPGQGELLDAALMAAVDHGP
QAPSIAIARMAATCGVGLNNAMASAVNVLGDVHGGAGEQAVELYQDIAGRIDEGAALDQAVSAGLAHYRDLHGRFVSGFG
HRFHPVDPRAPRLLALVDQAAEKSVVNGRFAAIARAVERALGEGRSKPVPMNIDGATAVIYAELGFPAPLARGLFCLSRS
VGILAHAWEQTQQGGRNKGPIPRQFLWTYDGTPQRDVPAQGD
>Mature_281_residues
SEINQAMDPGQQLSQDWWRTEIIDMRPGEIRYRGYPIEQLIGQVSFAQMIWLMLRGELPGPGQGELLDAALMAAVDHGPQ
APSIAIARMAATCGVGLNNAMASAVNVLGDVHGGAGEQAVELYQDIAGRIDEGAALDQAVSAGLAHYRDLHGRFVSGFGH
RFHPVDPRAPRLLALVDQAAEKSVVNGRFAAIARAVERALGEGRSKPVPMNIDGATAVIYAELGFPAPLARGLFCLSRSV
GILAHAWEQTQQGGRNKGPIPRQFLWTYDGTPQRDVPAQGD

Specific function: Tricarboxylic acid cycle. [C]

COG id: COG0372

COG function: function code C; Citrate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the citrate synthase family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17551266, Length=251, Percent_Identity=25.8964143426295, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: 624 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011278
- InterPro:   IPR016142
- InterPro:   IPR016143
- InterPro:   IPR002020
- InterPro:   IPR016141
- InterPro:   IPR019810 [H]

Pfam domain/function: PF00285 Citrate_synt [H]

EC number: =2.3.3.1 [H]

Molecular weight: Translated: 30278; Mature: 30147

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEINQAMDPGQQLSQDWWRTEIIDMRPGEIRYRGYPIEQLIGQVSFAQMIWLMLRGELP
CCHHHHHCCCHHHHHHHHHHHHHEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCC
GPGQGELLDAALMAAVDHGPQAPSIAIARMAATCGVGLNNAMASAVNVLGDVHGGAGEQA
CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHH
VELYQDIAGRIDEGAALDQAVSAGLAHYRDLHGRFVSGFGHRFHPVDPRAPRLLALVDQA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
AEKSVVNGRFAAIARAVERALGEGRSKPVPMNIDGATAVIYAELGFPAPLARGLFCLSRS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHH
VGILAHAWEQTQQGGRNKGPIPRQFLWTYDGTPQRDVPAQGD
HHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
SEINQAMDPGQQLSQDWWRTEIIDMRPGEIRYRGYPIEQLIGQVSFAQMIWLMLRGELP
CHHHHHCCCHHHHHHHHHHHHHEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCC
GPGQGELLDAALMAAVDHGPQAPSIAIARMAATCGVGLNNAMASAVNVLGDVHGGAGEQA
CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHH
VELYQDIAGRIDEGAALDQAVSAGLAHYRDLHGRFVSGFGHRFHPVDPRAPRLLALVDQA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
AEKSVVNGRFAAIARAVERALGEGRSKPVPMNIDGATAVIYAELGFPAPLARGLFCLSRS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHH
VGILAHAWEQTQQGGRNKGPIPRQFLWTYDGTPQRDVPAQGD
HHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8828222 [H]