Click here to switch to the map view.

The map label for this gene is ytcJ [H]

Identifier: 73538674

GI number: 73538674

Start: 1557804

End: 1559672

Strand: Direct

Name: ytcJ [H]

Synonym: Reut_B4849

Alternate gene names: 73538674

Gene position: 1557804-1559672 (Clockwise)

Preceding gene: 73538673

Following gene: 73538675

Centisome position: 57.14

GC content: 65.33

Gene sequence:

>1869_bases
ATGAATGCTTCGACCGCCCCGGACCTGATTCTCGTCAACGGCAAGTTCACCACGCTGGACCGGGCCAATCCGCAAGCCGA
AGCAGTCGCCATTCGCGATGGCCGGTTTGCCGCCGTCGGCACGAAGCAAGACATCATGCAGACCGCCGCCAGCAGCACGC
GCGTGATCGATCTTGGTGGCCGCCGTGCTATTCCGGGACTCATCGACAGCCACATGCACATCATCCGTGGCGGCCTGAAC
TACAACATGGAACTGCGCTGGGACGGCGTGCGCTCGCTGGCCGATGCCATGCGCATGCTGCGCGACCAGGTTGCGCGCAC
GCCCGCCCCGCAGTGGGTGCGCGTGGTCGGCGGCTTCACCGAACACCAGTTCGTGGAGAAACGCCTGCCAACCATCGAGG
AACTCAATGCGGCGGCGCCCGACACGCCCGTGTTCATCCTGCATCTGTATGATCGCGCAATCCTGAACGGCGCTGCATTG
CGCGCGGTCGGCTACACGAAAGACACGCCAAACCCGCCCGGGGGTGAAATCATTCGTGACGCAAGCGGCAACCCCACTGG
CCTGCTGCTGGCCAAGCCCAATGCCACCATCCTCTACGCCACGCTGGCCAAGGGGCCGAAACTGCCGCCCGAGTACCAGA
AGAATTCGACACGGCACTTCATGCGCGAGGTGAACCGGCTGGGCGTGACGGGCGTGATCGATGCGGGTGGCGGCTACCAG
AACTACCCCGAGGACTACAGCATCATCGAAGAACTGCACAGGGAAGGCCAGCTCACGGTGCGGCTCGCGTACAACCTGTT
CACGCAGAAGCCGAAGGAAGAACTGAGCGACTTCCGCAATTGGGCCGGGAAGGTCAAGCCCGGCCAGGGCGACGATCTGT
ACCGGCATAACGGCGCCGGCGAGATGCTGGTCTATACGGCCGCCGACTTCGAGGACTTCCGCGTCGAACGGCCCGAGATG
CCGCCGTCGATGGAAGGCGACCTGGAGCCTGTGATCCGGCTGCTGGTCGAGAACCGCTGGCCGTGGCGCCTGCATGCGAC
CTACGACGAGACGATTTCGCGCGCGCTCGATGTGTATGAAAAGGTCGCGCGAGACATGCCATTCGACGGCCTGCACTGGT
TCTTCGACCACGCCGAGACCATCAGCGACCGCAATATCGACCGCATCGCGGCGCTTGGCGGCGGCATCGCGGTGCAACAC
CGCATGGCCTACCAGGGCGAGTATTTCGTCGAACGCTATGGCGCAAGATCGGCCGAACGCACCCCGCCGATCCGGAAGAT
GCTCGAGCGCGGCGTCAAGGTCGGTGCGGGCACCGACGCCACGCGCGTCGCGTCCTACAACCCGTGGGTGTCGCTGTACT
GGCTCACTACCGGCAAGACGGTGGGCGGCATGTCGATGTATCCGCAGGCCAACCTGCTCGACCGCGAGACCGCGCTGCGG
CTGTGGACCGAAGCGAATACGTGGTTTTCGAACGAGGAAGGCAAGAAGGGCATGATGGCGGTCGGACAGCTTGCAGACCT
GGCGGTGCTGTCAAACGATTACTTCGCGGTCCCCGGCGACGAGATTCAGGACATCACCTCGGTCATGACCGTGCTCGGTG
GCAAGGTGGTCTACGGCGACGGTGAATTCGGCAAGCATGCGCCCGAGCTGCCGCCGCCGATGCCGGACTGGTCGCCGGCC
CGTCACGGCAGCCGCTACCAGCCGCGGCCACAGGCACAGGCCCGCGCGATGGCGAACACCGCTTGCGGTTGCGCCAGCGC
CTGCGGCGTGCACGGCCACGCGCACGCGGACGCGTGGGCGGCAAGCCTGCCCGTTTCCGATGAGCGCTCGTTCTGGGGCG
CAATGGGCTGCTCGTGCTGGGCGTTCTGA

Upstream 100 bases:

>100_bases
TGACACATTGACGTGAGTGGATCGCGGGCGCAGCGGCAACCGCCGCCGCGCCCGCCATAAGCCGTCACCTTGCCATGCCA
ACGCCTACAGGAGTTTCGCC

Downstream 100 bases:

>100_bases
TGTCGCGCCGCACCGGAGCGCCATGATGGCGCGCCACCAACCAACCGGAGTCCGACCATGAAGGTCTATATCGTCTCGCT
CGCCGCCGGGATTCTCGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 622; Mature: 622

Protein sequence:

>622_residues
MNASTAPDLILVNGKFTTLDRANPQAEAVAIRDGRFAAVGTKQDIMQTAASSTRVIDLGGRRAIPGLIDSHMHIIRGGLN
YNMELRWDGVRSLADAMRMLRDQVARTPAPQWVRVVGGFTEHQFVEKRLPTIEELNAAAPDTPVFILHLYDRAILNGAAL
RAVGYTKDTPNPPGGEIIRDASGNPTGLLLAKPNATILYATLAKGPKLPPEYQKNSTRHFMREVNRLGVTGVIDAGGGYQ
NYPEDYSIIEELHREGQLTVRLAYNLFTQKPKEELSDFRNWAGKVKPGQGDDLYRHNGAGEMLVYTAADFEDFRVERPEM
PPSMEGDLEPVIRLLVENRWPWRLHATYDETISRALDVYEKVARDMPFDGLHWFFDHAETISDRNIDRIAALGGGIAVQH
RMAYQGEYFVERYGARSAERTPPIRKMLERGVKVGAGTDATRVASYNPWVSLYWLTTGKTVGGMSMYPQANLLDRETALR
LWTEANTWFSNEEGKKGMMAVGQLADLAVLSNDYFAVPGDEIQDITSVMTVLGGKVVYGDGEFGKHAPELPPPMPDWSPA
RHGSRYQPRPQAQARAMANTACGCASACGVHGHAHADAWAASLPVSDERSFWGAMGCSCWAF

Sequences:

>Translated_622_residues
MNASTAPDLILVNGKFTTLDRANPQAEAVAIRDGRFAAVGTKQDIMQTAASSTRVIDLGGRRAIPGLIDSHMHIIRGGLN
YNMELRWDGVRSLADAMRMLRDQVARTPAPQWVRVVGGFTEHQFVEKRLPTIEELNAAAPDTPVFILHLYDRAILNGAAL
RAVGYTKDTPNPPGGEIIRDASGNPTGLLLAKPNATILYATLAKGPKLPPEYQKNSTRHFMREVNRLGVTGVIDAGGGYQ
NYPEDYSIIEELHREGQLTVRLAYNLFTQKPKEELSDFRNWAGKVKPGQGDDLYRHNGAGEMLVYTAADFEDFRVERPEM
PPSMEGDLEPVIRLLVENRWPWRLHATYDETISRALDVYEKVARDMPFDGLHWFFDHAETISDRNIDRIAALGGGIAVQH
RMAYQGEYFVERYGARSAERTPPIRKMLERGVKVGAGTDATRVASYNPWVSLYWLTTGKTVGGMSMYPQANLLDRETALR
LWTEANTWFSNEEGKKGMMAVGQLADLAVLSNDYFAVPGDEIQDITSVMTVLGGKVVYGDGEFGKHAPELPPPMPDWSPA
RHGSRYQPRPQAQARAMANTACGCASACGVHGHAHADAWAASLPVSDERSFWGAMGCSCWAF
>Mature_622_residues
MNASTAPDLILVNGKFTTLDRANPQAEAVAIRDGRFAAVGTKQDIMQTAASSTRVIDLGGRRAIPGLIDSHMHIIRGGLN
YNMELRWDGVRSLADAMRMLRDQVARTPAPQWVRVVGGFTEHQFVEKRLPTIEELNAAAPDTPVFILHLYDRAILNGAAL
RAVGYTKDTPNPPGGEIIRDASGNPTGLLLAKPNATILYATLAKGPKLPPEYQKNSTRHFMREVNRLGVTGVIDAGGGYQ
NYPEDYSIIEELHREGQLTVRLAYNLFTQKPKEELSDFRNWAGKVKPGQGDDLYRHNGAGEMLVYTAADFEDFRVERPEM
PPSMEGDLEPVIRLLVENRWPWRLHATYDETISRALDVYEKVARDMPFDGLHWFFDHAETISDRNIDRIAALGGGIAVQH
RMAYQGEYFVERYGARSAERTPPIRKMLERGVKVGAGTDATRVASYNPWVSLYWLTTGKTVGGMSMYPQANLLDRETALR
LWTEANTWFSNEEGKKGMMAVGQLADLAVLSNDYFAVPGDEIQDITSVMTVLGGKVVYGDGEFGKHAPELPPPMPDWSPA
RHGSRYQPRPQAQARAMANTACGCASACGVHGHAHADAWAASLPVSDERSFWGAMGCSCWAF

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 68805; Mature: 68805

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNASTAPDLILVNGKFTTLDRANPQAEAVAIRDGRFAAVGTKQDIMQTAASSTRVIDLGG
CCCCCCCCEEEECCCEEEECCCCCCCEEEEEECCCEEEECCHHHHHHHHCCCCEEEECCC
RRAIPGLIDSHMHIIRGGLNYNMELRWDGVRSLADAMRMLRDQVARTPAPQWVRVVGGFT
CCCCCHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCH
EHQFVEKRLPTIEELNAAAPDTPVFILHLYDRAILNGAALRAVGYTKDTPNPPGGEIIRD
HHHHHHHHCCCHHHHCCCCCCCCEEEEEEHHHHHHCCHHHEEECCCCCCCCCCCCCEEEC
ASGNPTGLLLAKPNATILYATLAKGPKLPPEYQKNSTRHFMREVNRLGVTGVIDAGGGYQ
CCCCCCEEEEECCCCEEEEEEECCCCCCCCHHCCCHHHHHHHHHHHCCCEEEEECCCCCC
NYPEDYSIIEELHREGQLTVRLAYNLFTQKPKEELSDFRNWAGKVKPGQGDDLYRHNGAG
CCCCHHHHHHHHHHCCCEEEEEEEHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCEECCCC
EMLVYTAADFEDFRVERPEMPPSMEGDLEPVIRLLVENRWPWRLHATYDETISRALDVYE
CEEEEEECCCHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHH
KVARDMPFDGLHWFFDHAETISDRNIDRIAALGGGIAVQHRMAYQGEYFVERYGARSAER
HHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCEEEHHHHHCCHHHHHHHCCCCCCC
TPPIRKMLERGVKVGAGTDATRVASYNPWVSLYWLTTGKTVGGMSMYPQANLLDRETALR
CCHHHHHHHCCCEECCCCCCCEEECCCCCEEEEEEECCCEECCCCCCCCCCCCCHHHHHH
LWTEANTWFSNEEGKKGMMAVGQLADLAVLSNDYFAVPGDEIQDITSVMTVLGGKVVYGD
EEECCCCCCCCCCCCCHHHHHHHHHHHHEECCCEEECCCHHHHHHHHHHHHHCCEEEECC
GEFGKHAPELPPPMPDWSPARHGSRYQPRPQAQARAMANTACGCASACGVHGHAHADAWA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCCCCHHH
ASLPVSDERSFWGAMGCSCWAF
HCCCCCCCCHHHHHCCCEEECC
>Mature Secondary Structure
MNASTAPDLILVNGKFTTLDRANPQAEAVAIRDGRFAAVGTKQDIMQTAASSTRVIDLGG
CCCCCCCCEEEECCCEEEECCCCCCCEEEEEECCCEEEECCHHHHHHHHCCCCEEEECCC
RRAIPGLIDSHMHIIRGGLNYNMELRWDGVRSLADAMRMLRDQVARTPAPQWVRVVGGFT
CCCCCHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCH
EHQFVEKRLPTIEELNAAAPDTPVFILHLYDRAILNGAALRAVGYTKDTPNPPGGEIIRD
HHHHHHHHCCCHHHHCCCCCCCCEEEEEEHHHHHHCCHHHEEECCCCCCCCCCCCCEEEC
ASGNPTGLLLAKPNATILYATLAKGPKLPPEYQKNSTRHFMREVNRLGVTGVIDAGGGYQ
CCCCCCEEEEECCCCEEEEEEECCCCCCCCHHCCCHHHHHHHHHHHCCCEEEEECCCCCC
NYPEDYSIIEELHREGQLTVRLAYNLFTQKPKEELSDFRNWAGKVKPGQGDDLYRHNGAG
CCCCHHHHHHHHHHCCCEEEEEEEHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCEECCCC
EMLVYTAADFEDFRVERPEMPPSMEGDLEPVIRLLVENRWPWRLHATYDETISRALDVYE
CEEEEEECCCHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHH
KVARDMPFDGLHWFFDHAETISDRNIDRIAALGGGIAVQHRMAYQGEYFVERYGARSAER
HHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCEEEHHHHHCCHHHHHHHCCCCCCC
TPPIRKMLERGVKVGAGTDATRVASYNPWVSLYWLTTGKTVGGMSMYPQANLLDRETALR
CCHHHHHHHCCCEECCCCCCCEEECCCCCEEEEEEECCCEECCCCCCCCCCCCCHHHHHH
LWTEANTWFSNEEGKKGMMAVGQLADLAVLSNDYFAVPGDEIQDITSVMTVLGGKVVYGD
EEECCCCCCCCCCCCCHHHHHHHHHHHHEECCCEEECCCHHHHHHHHHHHHHCCEEEECC
GEFGKHAPELPPPMPDWSPARHGSRYQPRPQAQARAMANTACGCASACGVHGHAHADAWA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCCCCHHH
ASLPVSDERSFWGAMGCSCWAF
HCCCCCCCCHHHHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]