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The map label for this gene is glxA [H]

Identifier: 73538657

GI number: 73538657

Start: 1537429

End: 1538610

Strand: Direct

Name: glxA [H]

Synonym: Reut_B4832

Alternate gene names: 73538657

Gene position: 1537429-1538610 (Clockwise)

Preceding gene: 73538648

Following gene: 73538658

Centisome position: 56.4

GC content: 65.74

Gene sequence:

>1182_bases
ATGCCGTACGCATCACCGGCGTTTGGTGCCCAGAGCACCCCCGCCCCACAACCCAGATCCGCCCGCTTGCCCGAACCAGC
CAAGATGGATGCCGCCATGACACCCGACGTTCCCATTTCTCCCGTCGCCGAGCTGGCGCCACGGCGCGTGCGTTTCGGCA
TCGTGCTGCTGCCGAACTTCACGCTGACGGCGTTCTCGGGTTTCGTCGACATGCTCCGGCTGTCGGCCGACGATGGCGAC
TACAGCAAGCCGGTTCGGTGCGTCTGGAGTGTGATCGGGAACACACTCGCCCCGGTACGCGCGAGTTGCGGGATCCAGGT
TGCACCGTGGGAAACATTCGACGAGTCAGAGCCGTTCGACTACGTGGTCGTCGTCGGCGGACTGCTGCACTCGGGGCCGC
AGGCGGGGCCCGAGACGCTGGACTTCATCCGCCGCGCGGCGGGCGGCGGCGCGACAATCGTCGGCATCTGCACGGGCGTA
TTCGCGTTGATGCGCGCTGGTGTGCTCCAGGGGCACCGGGCCTGCGTAAGCTGGTTCCATTACTGGGATTTCATGGAGCG
ATTCCCGTCAGTCGATCCCAACCTGCTGATTGCCGACCGGCTGTTCGTGATCGACCGCCGGCGCATCACCTGCTCGGGCG
GGCGCGCGTCGATCGATGTCGCAGCCGCCATTCTGCTGCGCCACTTCGATCACGCCACCGTCCAAAAGGCGCTCCGAATC
CTGCTGGTCGGCGAGATGCAGAAGGGTAATGCCCCACAGCCGCATCCACCCGGGCTGGAGCCCGCGACGCACCCCAAGGT
CAAGCGCGCAATCCTGCTGATGGAACAGCACGTCGGCCGGGCGCTCCCGCTCGATGCGCTTGCCTGCAAGCTCGACCTGT
CGCCACGACAACTCGAACGCCTGTTCAAGGCAGAGACGGGCAAGAGCCCACAGGCATTCGCCAAGCATGTGCGCCTGAGG
ACCGCTGCGTGGTTGTTGACCAGCTCGGACCGCACGGTCGCCGACATCGCCTTGGGCTGCGGCTTTGCCGATGCATCGCA
CCTTGGCCGTGAATTTCGCAAGCAATTCGGAGTGCCGCCCGCAGCCTACCGCGACAAAGGCCCGGATTCCGCCGAGCCGT
TGCTGCCCGACGGCGATGCTGGCGAGGTCTCGGCGCTCACTGAAATTGAGAGCGAGTGTTGA

Upstream 100 bases:

>100_bases
GATGATTTGCGTCGGAAAAGCGCAAGTTCGCGGCAGGCGGATCGGCGACGCTGACTGTGCCTGAGCCGCGTCGAGCGGAC
AGGCGGCGAGCGCTGCAGGA

Downstream 100 bases:

>100_bases
ACCTGTACCTACGCCCACGGACCATCACCTCGTCGGGCCACCAATCATTTGACGCCAACAGCGTATTTCCACAGAAGAGA
GCCATGAAAACACGCGCAGC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 392

Protein sequence:

>393_residues
MPYASPAFGAQSTPAPQPRSARLPEPAKMDAAMTPDVPISPVAELAPRRVRFGIVLLPNFTLTAFSGFVDMLRLSADDGD
YSKPVRCVWSVIGNTLAPVRASCGIQVAPWETFDESEPFDYVVVVGGLLHSGPQAGPETLDFIRRAAGGGATIVGICTGV
FALMRAGVLQGHRACVSWFHYWDFMERFPSVDPNLLIADRLFVIDRRRITCSGGRASIDVAAAILLRHFDHATVQKALRI
LLVGEMQKGNAPQPHPPGLEPATHPKVKRAILLMEQHVGRALPLDALACKLDLSPRQLERLFKAETGKSPQAFAKHVRLR
TAAWLLTSSDRTVADIALGCGFADASHLGREFRKQFGVPPAAYRDKGPDSAEPLLPDGDAGEVSALTEIESEC

Sequences:

>Translated_393_residues
MPYASPAFGAQSTPAPQPRSARLPEPAKMDAAMTPDVPISPVAELAPRRVRFGIVLLPNFTLTAFSGFVDMLRLSADDGD
YSKPVRCVWSVIGNTLAPVRASCGIQVAPWETFDESEPFDYVVVVGGLLHSGPQAGPETLDFIRRAAGGGATIVGICTGV
FALMRAGVLQGHRACVSWFHYWDFMERFPSVDPNLLIADRLFVIDRRRITCSGGRASIDVAAAILLRHFDHATVQKALRI
LLVGEMQKGNAPQPHPPGLEPATHPKVKRAILLMEQHVGRALPLDALACKLDLSPRQLERLFKAETGKSPQAFAKHVRLR
TAAWLLTSSDRTVADIALGCGFADASHLGREFRKQFGVPPAAYRDKGPDSAEPLLPDGDAGEVSALTEIESEC
>Mature_392_residues
PYASPAFGAQSTPAPQPRSARLPEPAKMDAAMTPDVPISPVAELAPRRVRFGIVLLPNFTLTAFSGFVDMLRLSADDGDY
SKPVRCVWSVIGNTLAPVRASCGIQVAPWETFDESEPFDYVVVVGGLLHSGPQAGPETLDFIRRAAGGGATIVGICTGVF
ALMRAGVLQGHRACVSWFHYWDFMERFPSVDPNLLIADRLFVIDRRRITCSGGRASIDVAAAILLRHFDHATVQKALRIL
LVGEMQKGNAPQPHPPGLEPATHPKVKRAILLMEQHVGRALPLDALACKLDLSPRQLERLFKAETGKSPQAFAKHVRLRT
AAWLLTSSDRTVADIALGCGFADASHLGREFRKQFGVPPAAYRDKGPDSAEPLLPDGDAGEVSALTEIESEC

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790339, Length=159, Percent_Identity=29.559748427673, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 42485; Mature: 42354

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYASPAFGAQSTPAPQPRSARLPEPAKMDAAMTPDVPISPVAELAPRRVRFGIVLLPNF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEEECCCC
TLTAFSGFVDMLRLSADDGDYSKPVRCVWSVIGNTLAPVRASCGIQVAPWETFDESEPFD
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCEECCCCCCCCCCCCC
YVVVVGGLLHSGPQAGPETLDFIRRAAGGGATIVGICTGVFALMRAGVLQGHRACVSWFH
EEEEEHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YWDFMERFPSVDPNLLIADRLFVIDRRRITCSGGRASIDVAAAILLRHFDHATVQKALRI
HHHHHHHCCCCCCCEEEECCEEEEECCEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHH
LLVGEMQKGNAPQPHPPGLEPATHPKVKRAILLMEQHVGRALPLDALACKLDLSPRQLER
HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHEECCCCHHHHHH
LFKAETGKSPQAFAKHVRLRTAAWLLTSSDRTVADIALGCGFADASHLGREFRKQFGVPP
HHHHCCCCCHHHHHHHHHHHHHHEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCC
AAYRDKGPDSAEPLLPDGDAGEVSALTEIESEC
CHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
PYASPAFGAQSTPAPQPRSARLPEPAKMDAAMTPDVPISPVAELAPRRVRFGIVLLPNF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEEECCCC
TLTAFSGFVDMLRLSADDGDYSKPVRCVWSVIGNTLAPVRASCGIQVAPWETFDESEPFD
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCEECCCCCCCCCCCCC
YVVVVGGLLHSGPQAGPETLDFIRRAAGGGATIVGICTGVFALMRAGVLQGHRACVSWFH
EEEEEHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YWDFMERFPSVDPNLLIADRLFVIDRRRITCSGGRASIDVAAAILLRHFDHATVQKALRI
HHHHHHHCCCCCCCEEEECCEEEEECCEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHH
LLVGEMQKGNAPQPHPPGLEPATHPKVKRAILLMEQHVGRALPLDALACKLDLSPRQLER
HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHEECCCCHHHHHH
LFKAETGKSPQAFAKHVRLRTAAWLLTSSDRTVADIALGCGFADASHLGREFRKQFGVPP
HHHHCCCCCHHHHHHHHHHHHHHEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCC
AAYRDKGPDSAEPLLPDGDAGEVSALTEIESEC
CHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]