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The map label for this gene is cycH [H]

Identifier: 73538598

GI number: 73538598

Start: 1472738

End: 1473955

Strand: Direct

Name: cycH [H]

Synonym: Reut_B4773

Alternate gene names: 73538598

Gene position: 1472738-1473955 (Clockwise)

Preceding gene: 73538597

Following gene: 73538599

Centisome position: 54.02

GC content: 66.5

Gene sequence:

>1218_bases
ATGACGACCTTCTGGTTCCTTGCCGCAGCGTTGATGGCCGTGACCATGGCGGGTCTGTTATGGCCGCTATTGCGCCATTC
CTCCGGCACAACCGTCTCGGACCGCCCTGTCCCGGCGTTGCGCGAGATATACCGTGACCAGCTCAGCGAACTCGACACCG
ATCTGCGCGCCGGCACGCTGAGCCCTGCAGGCCATGCGGACGCGCTCAACGAGCTTGCTCGCCGCCTGCTCGACGACACG
GGTGACCAATCCATCACGGTGCGCAGCCAGCGTTCATCCACGTTGCTCGCCGCGGCCTTGCTCGCCGTGCTGCCAAGCGC
AGCCATCTTGCTCTACCTGCATCTCGGCAACCCCGTCGCGCTCTGGAATGCCAGCGACATGCACGGCATCGAAGACGGCC
AGCACGAACTCAGCGTCGCGCAGATCGAAGGCATGGTGAACCAGCTCGCGACACGCCTGCACGACAAGCCTGAGGATCCC
GAGGGGTGGTCCATGCTCGCGCGTTCCTACACTGCGCTGCAGCGCTACGACGATGCCGCCGCGGCTTACGCAAAGGCGGT
TGTCCTTGCGCCCGACGTGGCGGCACTGCGCTCCGACTATGCCGATGTGCTCGCCAGCCTCAATGGCGGCTCGCTCGAAG
GACCGGCGACTGAGCAGATCCAGCGCGCGCTCGCGCTCGATGCTGATGACCCGAAGGGCCTGGCGCTGGCCGCGAGCGCA
GCCGCCGAACGCGGCGAGACCGCTCAGGCCATCAGCTATTGGGAACACCTCTATCGCCTGCTGCCGCCGGATTCGCAGAC
CGCCGCACGGGTCGCGGCCAACCTGGCTGCGGCGCGTGGCGACACCAGGGCGTCCGTAGCCACCCACGGCAGCATCAGCG
GAACCGTCACACTCGCGCCCGATGCCAGCCGCAAGCCCGGTCCCGATGAAACAGTCTTTGTCTATGCGCGCACCGTCGAT
GGTTCGCGCATGCCGCTGGCCGTGCTGCGCCGGACCGTTCGCAACCTGCCGCTGCATTTCACACTGGACGATTCGCTTGC
GCTCACGCCCGAGCGCAAGCTGTCGGGACAGGAACAAGTCATGGTGGAGGCGCGCATTTCGGCAAGCGGCAATGCGATGC
CGCAGGCGGGGGATCTCGTGGGCCAGGTGGGTCCTGTGCGGATCGGTACCGGAGATGTGCGCATCGTCATCGGTGCCATG
GGCACCGATGCACGTTGA

Upstream 100 bases:

>100_bases
TGGACGACGCCGAACGCCGCAGGCTGGCGGAGTTGCTTGATGAACCGCCACCGCAGCGGTCCCCGCGTTCGATCGACACG
TTGCCACCGTTATCGCCGCC

Downstream 100 bases:

>100_bases
TGCAGCCGTCGCGCGCCGCCTGACGAGCCGCGGAAGTAGAATGCCGCAATCCTCAGGAAACCATCGCCGCCTTCCGGGCC
TGTACTGCAGACATGCGCAT

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MTTFWFLAAALMAVTMAGLLWPLLRHSSGTTVSDRPVPALREIYRDQLSELDTDLRAGTLSPAGHADALNELARRLLDDT
GDQSITVRSQRSSTLLAAALLAVLPSAAILLYLHLGNPVALWNASDMHGIEDGQHELSVAQIEGMVNQLATRLHDKPEDP
EGWSMLARSYTALQRYDDAAAAYAKAVVLAPDVAALRSDYADVLASLNGGSLEGPATEQIQRALALDADDPKGLALAASA
AAERGETAQAISYWEHLYRLLPPDSQTAARVAANLAAARGDTRASVATHGSISGTVTLAPDASRKPGPDETVFVYARTVD
GSRMPLAVLRRTVRNLPLHFTLDDSLALTPERKLSGQEQVMVEARISASGNAMPQAGDLVGQVGPVRIGTGDVRIVIGAM
GTDAR

Sequences:

>Translated_405_residues
MTTFWFLAAALMAVTMAGLLWPLLRHSSGTTVSDRPVPALREIYRDQLSELDTDLRAGTLSPAGHADALNELARRLLDDT
GDQSITVRSQRSSTLLAAALLAVLPSAAILLYLHLGNPVALWNASDMHGIEDGQHELSVAQIEGMVNQLATRLHDKPEDP
EGWSMLARSYTALQRYDDAAAAYAKAVVLAPDVAALRSDYADVLASLNGGSLEGPATEQIQRALALDADDPKGLALAASA
AAERGETAQAISYWEHLYRLLPPDSQTAARVAANLAAARGDTRASVATHGSISGTVTLAPDASRKPGPDETVFVYARTVD
GSRMPLAVLRRTVRNLPLHFTLDDSLALTPERKLSGQEQVMVEARISASGNAMPQAGDLVGQVGPVRIGTGDVRIVIGAM
GTDAR
>Mature_404_residues
TTFWFLAAALMAVTMAGLLWPLLRHSSGTTVSDRPVPALREIYRDQLSELDTDLRAGTLSPAGHADALNELARRLLDDTG
DQSITVRSQRSSTLLAAALLAVLPSAAILLYLHLGNPVALWNASDMHGIEDGQHELSVAQIEGMVNQLATRLHDKPEDPE
GWSMLARSYTALQRYDDAAAAYAKAVVLAPDVAALRSDYADVLASLNGGSLEGPATEQIQRALALDADDPKGLALAASAA
AERGETAQAISYWEHLYRLLPPDSQTAARVAANLAAARGDTRASVATHGSISGTVTLAPDASRKPGPDETVFVYARTVDG
SRMPLAVLRRTVRNLPLHFTLDDSLALTPERKLSGQEQVMVEARISASGNAMPQAGDLVGQVGPVRIGTGDVRIVIGAMG
TDAR

Specific function: Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase [H]

COG id: COG4235

COG function: function code O; Cytochrome c biogenesis factor

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017560
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42933; Mature: 42802

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTFWFLAAALMAVTMAGLLWPLLRHSSGTTVSDRPVPALREIYRDQLSELDTDLRAGTL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
SPAGHADALNELARRLLDDTGDQSITVRSQRSSTLLAAALLAVLPSAAILLYLHLGNPVA
CCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHEEEEEECCCEEE
LWNASDMHGIEDGQHELSVAQIEGMVNQLATRLHDKPEDPEGWSMLARSYTALQRYDDAA
EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
AAYAKAVVLAPDVAALRSDYADVLASLNGGSLEGPATEQIQRALALDADDPKGLALAASA
HHHHHHHEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEHHH
AAERGETAQAISYWEHLYRLLPPDSQTAARVAANLAAARGDTRASVATHGSISGTVTLAP
HHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEECC
DASRKPGPDETVFVYARTVDGSRMPLAVLRRTVRNLPLHFTLDDSLALTPERKLSGQEQV
CCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCEEEEECCCEEECCHHHCCCCHHE
MVEARISASGNAMPQAGDLVGQVGPVRIGTGDVRIVIGAMGTDAR
EEEEEECCCCCCCCCHHHHHCCCCCEEECCCCEEEEEEECCCCCC
>Mature Secondary Structure 
TTFWFLAAALMAVTMAGLLWPLLRHSSGTTVSDRPVPALREIYRDQLSELDTDLRAGTL
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
SPAGHADALNELARRLLDDTGDQSITVRSQRSSTLLAAALLAVLPSAAILLYLHLGNPVA
CCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHEEEEEECCCEEE
LWNASDMHGIEDGQHELSVAQIEGMVNQLATRLHDKPEDPEGWSMLARSYTALQRYDDAA
EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
AAYAKAVVLAPDVAALRSDYADVLASLNGGSLEGPATEQIQRALALDADDPKGLALAASA
HHHHHHHEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEHHH
AAERGETAQAISYWEHLYRLLPPDSQTAARVAANLAAARGDTRASVATHGSISGTVTLAP
HHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEECC
DASRKPGPDETVFVYARTVDGSRMPLAVLRRTVRNLPLHFTLDDSLALTPERKLSGQEQV
CCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCEEEEECCCEEECCHHHCCCCHHE
MVEARISASGNAMPQAGDLVGQVGPVRIGTGDVRIVIGAMGTDAR
EEEEEECCCCCCCCCHHHHHCCCCCEEECCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]