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The map label for this gene is napC [H]

Identifier: 73538590

GI number: 73538590

Start: 1466343

End: 1466930

Strand: Direct

Name: napC [H]

Synonym: Reut_B4765

Alternate gene names: 73538590

Gene position: 1466343-1466930 (Clockwise)

Preceding gene: 73538589

Following gene: 73538591

Centisome position: 53.79

GC content: 60.2

Gene sequence:

>588_bases
ATGCTGGATCTCATCAAGCGCTATTGGCGGACCATCAACCGGCCCAGCGCCTATTTCAGCCTGGGCTTCCTGACGCTGGG
GGGTTTCATTGCCGGGGTGATGTTCTGGGGCGCGTTCAACACCGCGCTGGAGCTGACCAATACCGAGCAATTCTGCACCG
GTTGCCATGAGATGCGCGACAACGTCTACCAGGAACTGCAGGGCACCATCCACTTCACCAACCGCAGCGGCGTGCGCGCC
AAGTGTTCGGACTGCCATGTGCCACACAACTGGACCACCAAGATGGCGCGCAAGATGCAGGCGTCGAAAGAGGTCTGGGG
CAAGATCTTTGGCACGATCAATACGCGCGAGAAGTTCCTCGCGCACCGGCTGGAGCTGGCCCAGCACGAGTGGGCACGCT
TCAAGGCCAACGACTCGCTTGAATGCCGCAACTGCCACGACTACCAGTCGATGGACTTCACGCGCCAGAGCCCGCGCGCA
CAGGCCATGCATTCGACCTATCTGGAAAACAAGGAAAAGACCTGCATCGATTGCCACAAGGGCATTGCCCACCACCTGCC
CGACGTGTCGAAAGCCGGGGAACAGTAG

Upstream 100 bases:

>100_bases
GCCGCTGGTCGGCAATAACTTCGTCGATGTGGAAACGATGCTCAAGCGCAAGCCCGGCGCCAAGAGCGCGGGCAAGTAAC
CAACAAGACAGGTGCGCGCC

Downstream 100 bases:

>100_bases
CGCGTGCCGACTCCCTCTTCCGGGCTCTCCTGTAATGGCGTTGCCGTTGGCCCGGTGCTGCGGGCCAACGATCTTGCGTT
TTCTCGTGGGGGGCGCCCTG

Product: periplasmic nitrate reductase subunit NapC

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MLDLIKRYWRTINRPSAYFSLGFLTLGGFIAGVMFWGAFNTALELTNTEQFCTGCHEMRDNVYQELQGTIHFTNRSGVRA
KCSDCHVPHNWTTKMARKMQASKEVWGKIFGTINTREKFLAHRLELAQHEWARFKANDSLECRNCHDYQSMDFTRQSPRA
QAMHSTYLENKEKTCIDCHKGIAHHLPDVSKAGEQ

Sequences:

>Translated_195_residues
MLDLIKRYWRTINRPSAYFSLGFLTLGGFIAGVMFWGAFNTALELTNTEQFCTGCHEMRDNVYQELQGTIHFTNRSGVRA
KCSDCHVPHNWTTKMARKMQASKEVWGKIFGTINTREKFLAHRLELAQHEWARFKANDSLECRNCHDYQSMDFTRQSPRA
QAMHSTYLENKEKTCIDCHKGIAHHLPDVSKAGEQ
>Mature_195_residues
MLDLIKRYWRTINRPSAYFSLGFLTLGGFIAGVMFWGAFNTALELTNTEQFCTGCHEMRDNVYQELQGTIHFTNRSGVRA
KCSDCHVPHNWTTKMARKMQASKEVWGKIFGTINTREKFLAHRLELAQHEWARFKANDSLECRNCHDYQSMDFTRQSPRA
QAMHSTYLENKEKTCIDCHKGIAHHLPDVSKAGEQ

Specific function: Mediates electron flow from quinones to the NapAB complex [H]

COG id: COG3005

COG function: function code C; Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788530, Length=189, Percent_Identity=56.0846560846561, Blast_Score=229, Evalue=7e-62,
Organism=Escherichia coli, GI1787230, Length=187, Percent_Identity=41.7112299465241, Blast_Score=167, Evalue=5e-43,
Organism=Escherichia coli, GI1788181, Length=148, Percent_Identity=43.9189189189189, Blast_Score=141, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011031
- InterPro:   IPR005126
- InterPro:   IPR011885 [H]

Pfam domain/function: PF03264 Cytochrom_NNT [H]

EC number: NA

Molecular weight: Translated: 22580; Mature: 22580

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDLIKRYWRTINRPSAYFSLGFLTLGGFIAGVMFWGAFNTALELTNTEQFCTGCHEMRD
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
NVYQELQGTIHFTNRSGVRAKCSDCHVPHNWTTKMARKMQASKEVWGKIFGTINTREKFL
HHHHHHHCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
AHRLELAQHEWARFKANDSLECRNCHDYQSMDFTRQSPRAQAMHSTYLENKEKTCIDCHK
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH
GIAHHLPDVSKAGEQ
HHHHHCCCHHCCCCC
>Mature Secondary Structure
MLDLIKRYWRTINRPSAYFSLGFLTLGGFIAGVMFWGAFNTALELTNTEQFCTGCHEMRD
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
NVYQELQGTIHFTNRSGVRAKCSDCHVPHNWTTKMARKMQASKEVWGKIFGTINTREKFL
HHHHHHHCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
AHRLELAQHEWARFKANDSLECRNCHDYQSMDFTRQSPRAQAMHSTYLENKEKTCIDCHK
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH
GIAHHLPDVSKAGEQ
HHHHHCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7639719 [H]