Click here to switch to the map view.

The map label for this gene is appB [H]

Identifier: 73538115

GI number: 73538115

Start: 942855

End: 943862

Strand: Direct

Name: appB [H]

Synonym: Reut_B4285

Alternate gene names: 73538115

Gene position: 942855-943862 (Clockwise)

Preceding gene: 73538114

Following gene: 73538116

Centisome position: 34.59

GC content: 63.79

Gene sequence:

>1008_bases
ATGGGCATCGACCTTTCCCTCCTCTGGATCCTCATCATCTTCTTCGGCGTGATGATGTACGTCGTCATGGATGGCTTTGA
TCTTGGCATCGGCATGCTGTTTCCGTTCGTGCCCGACCGCCACGACCGCGACGTGATGATGAACACCGTGGCCCCGGTCT
GGGACGGCAACGAAACGTGGCTGGTACTCGGCGGTGCCGGCCTGCTCGCTGCGTTTCCACTCGCCTATTCGGTGGTGCTG
AGTGCACTCTACCTGCCGCTCATGCTGATGCTGCTGGGCCTGATTTTCCGCGGCGTGGCGTTCGAGTTCCGCTTCAAGGC
CAATGACCGCGAACGGCCGGTGTGGGATGCCTCCTTCATTGGCGGCTCGCTCGTGGCATCGTTCTTCCAGGGCGTGGCGC
TGGGCGCGTATATCGACGGCATCCGCATGGAAGGCCACCGTTTCGCCGGCGGCCCGCTGGACTGGCTTGCGCCGTTCCCG
CTGTTCTGCGGCGTCGGTCTGGTAGTCGCCTATACGGTGCTGGGCAGCACGTGGCTGATCATGAAGACCGAGGGCGAACT
GCACCAGCGCATGGTGCGGCTGGCCGGCACGCTGGGCTGGCTGCTGCTTGCCGTTATCGCGGCGATCAGTCTCTGGACAC
CGCTCACGCACCCGGAGATTGCCGAACGCTGGTTCAGCCTGCCGAATCTGGTCTTGTTCTCGCCTGTGCCGCTGCTGGTC
GTGCTGTGCGTGCTCGGGCTGATGCGCGCGCTGCGGCGGACGCCGAACATGGCGCCGTTCCTGTATGCACTCGGGCTGGT
GTTCCTCGGCTATACGGGGCTTGCGATCAGCGTCTGGCCCAATATCATCCCGCCGGGAATTTCCATCTGGGATGCGGCAG
CACCGCCGCAGAGCCAGGGCTTCGCGTTGGTGGGCGCGCTGTTCATCATTCCATTCATCCTGATGTACACGGTGTGGGCC
TACTACGTCTTCCGCGGCAAGGTCCGCCACGGCGAGGGGTACCACTGA

Upstream 100 bases:

>100_bases
GGCCCCGGCCGCGGCCACACGCCTGCACGCCCGATTTCCGCCGTCGAGGACGATGACGTGATGGCGCCCCATCAACCCGC
TCGCAGCAGGAGCTGACGCC

Downstream 100 bases:

>100_bases
TGGCACCCCGTTCCGTGAGGCTGCCGCTCTGGCTCCAGCGCGTCGGCTGGCTAGTGCTGATCTGGGCCGCCAGCGTGGCA
GGCCTTGGCGTCGCCGCCTG

Product: cytochrome bd ubiquinol oxidase subunit II

Products: NA

Alternate protein names: Cytochrome bd-II oxidase subunit II [H]

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MGIDLSLLWILIIFFGVMMYVVMDGFDLGIGMLFPFVPDRHDRDVMMNTVAPVWDGNETWLVLGGAGLLAAFPLAYSVVL
SALYLPLMLMLLGLIFRGVAFEFRFKANDRERPVWDASFIGGSLVASFFQGVALGAYIDGIRMEGHRFAGGPLDWLAPFP
LFCGVGLVVAYTVLGSTWLIMKTEGELHQRMVRLAGTLGWLLLAVIAAISLWTPLTHPEIAERWFSLPNLVLFSPVPLLV
VLCVLGLMRALRRTPNMAPFLYALGLVFLGYTGLAISVWPNIIPPGISIWDAAAPPQSQGFALVGALFIIPFILMYTVWA
YYVFRGKVRHGEGYH

Sequences:

>Translated_335_residues
MGIDLSLLWILIIFFGVMMYVVMDGFDLGIGMLFPFVPDRHDRDVMMNTVAPVWDGNETWLVLGGAGLLAAFPLAYSVVL
SALYLPLMLMLLGLIFRGVAFEFRFKANDRERPVWDASFIGGSLVASFFQGVALGAYIDGIRMEGHRFAGGPLDWLAPFP
LFCGVGLVVAYTVLGSTWLIMKTEGELHQRMVRLAGTLGWLLLAVIAAISLWTPLTHPEIAERWFSLPNLVLFSPVPLLV
VLCVLGLMRALRRTPNMAPFLYALGLVFLGYTGLAISVWPNIIPPGISIWDAAAPPQSQGFALVGALFIIPFILMYTVWA
YYVFRGKVRHGEGYH
>Mature_334_residues
GIDLSLLWILIIFFGVMMYVVMDGFDLGIGMLFPFVPDRHDRDVMMNTVAPVWDGNETWLVLGGAGLLAAFPLAYSVVLS
ALYLPLMLMLLGLIFRGVAFEFRFKANDRERPVWDASFIGGSLVASFFQGVALGAYIDGIRMEGHRFAGGPLDWLAPFPL
FCGVGLVVAYTVLGSTWLIMKTEGELHQRMVRLAGTLGWLLLAVIAAISLWTPLTHPEIAERWFSLPNLVLFSPVPLLVV
LCVLGLMRALRRTPNMAPFLYALGLVFLGYTGLAISVWPNIIPPGISIWDAAAPPQSQGFALVGALFIIPFILMYTVWAY
YVFRGKVRHGEGYH

Specific function: Cytochrome oxidase subunit [H]

COG id: COG1294

COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 2

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli CydB [H]

Homologues:

Organism=Escherichia coli, GI1787213, Length=363, Percent_Identity=31.404958677686, Blast_Score=137, Evalue=8e-34,
Organism=Escherichia coli, GI1786954, Length=370, Percent_Identity=29.1891891891892, Blast_Score=137, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003317 [H]

Pfam domain/function: PF02322 Cyto_ox_2 [H]

EC number: 1.10.3.-

Molecular weight: Translated: 37045; Mature: 36914

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIDLSLLWILIIFFGVMMYVVMDGFDLGIGMLFPFVPDRHDRDVMMNTVAPVWDGNETW
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCEE
LVLGGAGLLAAFPLAYSVVLSALYLPLMLMLLGLIFRGVAFEFRFKANDRERPVWDASFI
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHH
GGSLVASFFQGVALGAYIDGIRMEGHRFAGGPLDWLAPFPLFCGVGLVVAYTVLGSTWLI
HHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEE
MKTEGELHQRMVRLAGTLGWLLLAVIAAISLWTPLTHPEIAERWFSLPNLVLFSPVPLLV
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHCCHHHHH
VLCVLGLMRALRRTPNMAPFLYALGLVFLGYTGLAISVWPNIIPPGISIWDAAAPPQSQG
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
FALVGALFIIPFILMYTVWAYYVFRGKVRHGEGYH
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
GIDLSLLWILIIFFGVMMYVVMDGFDLGIGMLFPFVPDRHDRDVMMNTVAPVWDGNETW
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCEE
LVLGGAGLLAAFPLAYSVVLSALYLPLMLMLLGLIFRGVAFEFRFKANDRERPVWDASFI
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHH
GGSLVASFFQGVALGAYIDGIRMEGHRFAGGPLDWLAPFPLFCGVGLVVAYTVLGSTWLI
HHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEE
MKTEGELHQRMVRLAGTLGWLLLAVIAAISLWTPLTHPEIAERWFSLPNLVLFSPVPLLV
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHCCHHHHH
VLCVLGLMRALRRTPNMAPFLYALGLVFLGYTGLAISVWPNIIPPGISIWDAAAPPQSQG
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
FALVGALFIIPFILMYTVWAYYVFRGKVRHGEGYH
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on diphenols and related substances as donors; With oxygen as acceptor [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1658595; 8905232; 9278503; 8626304 [H]