| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is xsc [H]
Identifier: 73537608
GI number: 73537608
Start: 373891
End: 375741
Strand: Reverse
Name: xsc [H]
Synonym: Reut_B3773
Alternate gene names: 73537608
Gene position: 375741-373891 (Counterclockwise)
Preceding gene: 73537610
Following gene: 73537607
Centisome position: 13.78
GC content: 65.26
Gene sequence:
>1851_bases ATGCGCGACCTCGACACGACTACGCAGCCCGCCGTTTCCGGTGGCTCGGCCACCGAGACCCAGGTGCCAGCCGGCCCCCA GACCATGACGCCGTCCGAAGCGTTCGTGGAGACCATGGTCGCCAATGGCGTGACCGAGATGTTCGGCATCATGGGCTCCG CGTTCATGGACGCCATGGACATCTTCGCCCCGGCCGGCATTCGTCTTATCCCGGTCGTGCATGAACAGGGTGCTGGCCAT ATGGCTGACGGCTATGCTCGCGTGTCGGGCCGCCATGGCGTGGTGATCGGCCAGAACGGTCCCGGCATCTCGAACTGCGT GACGTCCATCGCTGCCGCGTACTGGGCGCATAGCCCGGTCGTGATCGTCACGCCCGAAGCCGGCACCACCGGCATCGGCC TGGGCGGCTTCCAGGAAGCCAAGCAACTGCCGATGTTCCAGGAGTTCACCAAGTACCAGGGCCACGTCACGCATCCGCAG CGCATGGCCGAGTTCACCGGCCGCTGCTTCGACCGCGCGCTGGCCGAAATGGGCCCGACCCAGCTCAACATCCCGCGTGA CTACTTCTACGGCAAGGTCAATGTCGAGATTCCGAAGCCGCAGCGCCTGGACCGCGGCCCCGGCGGCGAACAGAGCCTGA ACGAAGCGGCCGAGCTGCTGGCACAGGCCAAGTTCCCCGTGATCATCTCGGGCGGCGGCGTGGTGATGGCCGATGCCATC GAGGAATGCAAGGCACTGGCCGAGCGTCTGGGCGCGCCGGTGGTCAACAGCTACCTGCACAACGACTCGTTCCCCGCCAG CCACCCGCTGTGGTGCGGTCCGCTGGGCTACCAGGGTTCGAAGGCTGCAATGAAGCTGATCTCGCGCGCCGACGTGGTGA TCGCACTGGGCTCGCGCCTCGGGCCGTTCGGCACGCTGCCGCAGCACGGCATGGACTACTGGCCGAAGAACGCGAAGATC ATCCAGATCGACGCCGATCACAAGATGCTGGGCCTGGTGAAGAAGATCTCGGTGGGCATCTGCGGCGACGCCAAGGCTGC CGCCATTGCGCTCACGCAGCGCCTGGCCAACCGCACGCTTGCCTGCGACAGCAGCCGCGACGGCCGCGCCACGGAAATCG CCAACGAAAAGGCCGCATGGGAAAAGGAACTGGACGGTTGGACGCACGAGCGCGATCCGTACAGCCTGGACATGATCGAG GAGCAGAAGAACGAGCGCACCTTCAACGGCGGCACGTACCTGCACCCGCGCCAGGTGCTGCGTGAACTCGAAAAGGCCAT GCCAGCCGACGTGATGGTGTCGACCGACATCGGCAACATCAACTCAGTCGCCAACAGCTACCTGCGCTTCGAAAAGCCGC GCAGCTTCTTCGCGGCGATGAGCTGGGGCAATTGCGGTTATGCGTTCCCGACCATCATCGGCGCCAAAGTAGCGGCACCG CACCGTCCGGCCGTCTCGTACGCCGGTGACGGCGCCTGGGGCATGAGCCTGATGGAAACCATGACCTGCGTGCGCCACAA CATCCCGGTGACGGCTGTGGTCTTCCACAACCGCCAGTGGGGCGCGGAGAAGAAGAACCAGGTGGACTTCTACAACCGCC GCTTCGTCGCCGGCGAGCTCGACAACCAGAGCTTCGCCGCCATCGCCAAGGCCATGGGCGCGGAAGGCATCGTGGTGGAT CGCCTGGAAGACGTGGGCCCGGCACTGAAGCGCGCCATCGACCTGCAGATGAACCACGGCAAGACCACGATCATCGAAGT GCTGTGCACGCGTGAACTCGGCGACCCGTTCCGCCGCGACGCGCTGTCCAAGCCGGTGCGCTACCTGGACAAGTACAAGG ACTACGTCTGA
Upstream 100 bases:
>100_bases ACTTCCTATTGACCACGGGCTGTTCTCCGCCTACATTTCCCTCACCAAACAGTTTCTGGAACGAATCGTTCCACTTATTA CGTCACACAGGAGACACCCC
Downstream 100 bases:
>100_bases TCGAGTCTGATCGAAGCTGCGCCCTATCGTTCGCGATCGGGTGCGCCCTCTCCCGCTTGCGGGAGAGGGCGATAACACCA AGGGCATAGCGCTGATCGCT
Product: sulfoacetaldehyde acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 616; Mature: 616
Protein sequence:
>616_residues MRDLDTTTQPAVSGGSATETQVPAGPQTMTPSEAFVETMVANGVTEMFGIMGSAFMDAMDIFAPAGIRLIPVVHEQGAGH MADGYARVSGRHGVVIGQNGPGISNCVTSIAAAYWAHSPVVIVTPEAGTTGIGLGGFQEAKQLPMFQEFTKYQGHVTHPQ RMAEFTGRCFDRALAEMGPTQLNIPRDYFYGKVNVEIPKPQRLDRGPGGEQSLNEAAELLAQAKFPVIISGGGVVMADAI EECKALAERLGAPVVNSYLHNDSFPASHPLWCGPLGYQGSKAAMKLISRADVVIALGSRLGPFGTLPQHGMDYWPKNAKI IQIDADHKMLGLVKKISVGICGDAKAAAIALTQRLANRTLACDSSRDGRATEIANEKAAWEKELDGWTHERDPYSLDMIE EQKNERTFNGGTYLHPRQVLRELEKAMPADVMVSTDIGNINSVANSYLRFEKPRSFFAAMSWGNCGYAFPTIIGAKVAAP HRPAVSYAGDGAWGMSLMETMTCVRHNIPVTAVVFHNRQWGAEKKNQVDFYNRRFVAGELDNQSFAAIAKAMGAEGIVVD RLEDVGPALKRAIDLQMNHGKTTIIEVLCTRELGDPFRRDALSKPVRYLDKYKDYV
Sequences:
>Translated_616_residues MRDLDTTTQPAVSGGSATETQVPAGPQTMTPSEAFVETMVANGVTEMFGIMGSAFMDAMDIFAPAGIRLIPVVHEQGAGH MADGYARVSGRHGVVIGQNGPGISNCVTSIAAAYWAHSPVVIVTPEAGTTGIGLGGFQEAKQLPMFQEFTKYQGHVTHPQ RMAEFTGRCFDRALAEMGPTQLNIPRDYFYGKVNVEIPKPQRLDRGPGGEQSLNEAAELLAQAKFPVIISGGGVVMADAI EECKALAERLGAPVVNSYLHNDSFPASHPLWCGPLGYQGSKAAMKLISRADVVIALGSRLGPFGTLPQHGMDYWPKNAKI IQIDADHKMLGLVKKISVGICGDAKAAAIALTQRLANRTLACDSSRDGRATEIANEKAAWEKELDGWTHERDPYSLDMIE EQKNERTFNGGTYLHPRQVLRELEKAMPADVMVSTDIGNINSVANSYLRFEKPRSFFAAMSWGNCGYAFPTIIGAKVAAP HRPAVSYAGDGAWGMSLMETMTCVRHNIPVTAVVFHNRQWGAEKKNQVDFYNRRFVAGELDNQSFAAIAKAMGAEGIVVD RLEDVGPALKRAIDLQMNHGKTTIIEVLCTRELGDPFRRDALSKPVRYLDKYKDYV >Mature_616_residues MRDLDTTTQPAVSGGSATETQVPAGPQTMTPSEAFVETMVANGVTEMFGIMGSAFMDAMDIFAPAGIRLIPVVHEQGAGH MADGYARVSGRHGVVIGQNGPGISNCVTSIAAAYWAHSPVVIVTPEAGTTGIGLGGFQEAKQLPMFQEFTKYQGHVTHPQ RMAEFTGRCFDRALAEMGPTQLNIPRDYFYGKVNVEIPKPQRLDRGPGGEQSLNEAAELLAQAKFPVIISGGGVVMADAI EECKALAERLGAPVVNSYLHNDSFPASHPLWCGPLGYQGSKAAMKLISRADVVIALGSRLGPFGTLPQHGMDYWPKNAKI IQIDADHKMLGLVKKISVGICGDAKAAAIALTQRLANRTLACDSSRDGRATEIANEKAAWEKELDGWTHERDPYSLDMIE EQKNERTFNGGTYLHPRQVLRELEKAMPADVMVSTDIGNINSVANSYLRFEKPRSFFAAMSWGNCGYAFPTIIGAKVAAP HRPAVSYAGDGAWGMSLMETMTCVRHNIPVTAVVFHNRQWGAEKKNQVDFYNRRFVAGELDNQSFAAIAKAMGAEGIVVD RLEDVGPALKRAIDLQMNHGKTTIIEVLCTRELGDPFRRDALSKPVRYLDKYKDYV
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI21361361, Length=613, Percent_Identity=24.1435562805873, Blast_Score=125, Evalue=9e-29, Organism=Homo sapiens, GI93004078, Length=591, Percent_Identity=22.3350253807107, Blast_Score=117, Evalue=2e-26, Organism=Escherichia coli, GI87081685, Length=570, Percent_Identity=26.6666666666667, Blast_Score=211, Evalue=1e-55, Organism=Escherichia coli, GI1790104, Length=554, Percent_Identity=25.2707581227437, Blast_Score=166, Evalue=3e-42, Organism=Escherichia coli, GI1786717, Length=590, Percent_Identity=25.4237288135593, Blast_Score=155, Evalue=8e-39, Organism=Escherichia coli, GI1787096, Length=594, Percent_Identity=23.9057239057239, Blast_Score=144, Evalue=2e-35, Organism=Escherichia coli, GI1788716, Length=497, Percent_Identity=24.9496981891348, Blast_Score=117, Evalue=3e-27, Organism=Caenorhabditis elegans, GI17542570, Length=579, Percent_Identity=24.006908462867, Blast_Score=119, Evalue=3e-27, Organism=Caenorhabditis elegans, GI17531301, Length=588, Percent_Identity=23.2993197278912, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17531299, Length=588, Percent_Identity=23.2993197278912, Blast_Score=84, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6323755, Length=568, Percent_Identity=27.112676056338, Blast_Score=194, Evalue=3e-50, Organism=Saccharomyces cerevisiae, GI6320816, Length=592, Percent_Identity=22.4662162162162, Blast_Score=122, Evalue=2e-28, Organism=Drosophila melanogaster, GI19922626, Length=509, Percent_Identity=24.75442043222, Blast_Score=120, Evalue=3e-27,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017820 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.3.3.15 [H]
Molecular weight: Translated: 66934; Mature: 66934
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDLDTTTQPAVSGGSATETQVPAGPQTMTPSEAFVETMVANGVTEMFGIMGSAFMDAMD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFAPAGIRLIPVVHEQGAGHMADGYARVSGRHGVVIGQNGPGISNCVTSIAAAYWAHSPV HHCCCCCEEEEEEECCCCCCCCCCHHEECCCCCEEECCCCCCHHHHHHHHHHHHHCCCCE VIVTPEAGTTGIGLGGFQEAKQLPMFQEFTKYQGHVTHPQRMAEFTGRCFDRALAEMGPT EEEECCCCCCCCCCCCHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC QLNIPRDYFYGKVNVEIPKPQRLDRGPGGEQSLNEAAELLAQAKFPVIISGGGVVMADAI EECCCHHHEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCEEEHHHH EECKALAERLGAPVVNSYLHNDSFPASHPLWCGPLGYQGSKAAMKLISRADVVIALGSRL HHHHHHHHHHCCHHHHHHHCCCCCCCCCCCEECCCCCCCHHHHHHHHHHCCEEEEECCCC GPFGTLPQHGMDYWPKNAKIIQIDADHKMLGLVKKISVGICGDAKAAAIALTQRLANRTL CCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCEECCCCHHHHHHHHHHHHCCCE ACDSSRDGRATEIANEKAAWEKELDGWTHERDPYSLDMIEEQKNERTFNGGTYLHPRQVL ECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEECCCCEECHHHHH RELEKAMPADVMVSTDIGNINSVANSYLRFEKPRSFFAAMSWGNCGYAFPTIIGAKVAAP HHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHCCCC HRPAVSYAGDGAWGMSLMETMTCVRHNIPVTAVVFHNRQWGAEKKNQVDFYNRRFVAGEL CCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHCEEEEECC DNQSFAAIAKAMGAEGIVVDRLEDVGPALKRAIDLQMNHGKTTIIEVLCTRELGDPFRRD CCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCHHHHH ALSKPVRYLDKYKDYV HHHHHHHHHHHHHCCC >Mature Secondary Structure MRDLDTTTQPAVSGGSATETQVPAGPQTMTPSEAFVETMVANGVTEMFGIMGSAFMDAMD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFAPAGIRLIPVVHEQGAGHMADGYARVSGRHGVVIGQNGPGISNCVTSIAAAYWAHSPV HHCCCCCEEEEEEECCCCCCCCCCHHEECCCCCEEECCCCCCHHHHHHHHHHHHHCCCCE VIVTPEAGTTGIGLGGFQEAKQLPMFQEFTKYQGHVTHPQRMAEFTGRCFDRALAEMGPT EEEECCCCCCCCCCCCHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC QLNIPRDYFYGKVNVEIPKPQRLDRGPGGEQSLNEAAELLAQAKFPVIISGGGVVMADAI EECCCHHHEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCEEEHHHH EECKALAERLGAPVVNSYLHNDSFPASHPLWCGPLGYQGSKAAMKLISRADVVIALGSRL HHHHHHHHHHCCHHHHHHHCCCCCCCCCCCEECCCCCCCHHHHHHHHHHCCEEEEECCCC GPFGTLPQHGMDYWPKNAKIIQIDADHKMLGLVKKISVGICGDAKAAAIALTQRLANRTL CCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCEECCCCHHHHHHHHHHHHCCCE ACDSSRDGRATEIANEKAAWEKELDGWTHERDPYSLDMIEEQKNERTFNGGTYLHPRQVL ECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEECCCCEECHHHHH RELEKAMPADVMVSTDIGNINSVANSYLRFEKPRSFFAAMSWGNCGYAFPTIIGAKVAAP HHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHCCCC HRPAVSYAGDGAWGMSLMETMTCVRHNIPVTAVVFHNRQWGAEKKNQVDFYNRRFVAGEL CCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHCEEEEECC DNQSFAAIAKAMGAEGIVVDRLEDVGPALKRAIDLQMNHGKTTIIEVLCTRELGDPFRRD CCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCHHHHH ALSKPVRYLDKYKDYV HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12358600 [H]