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The map label for this gene is yfeT [C]

Identifier: 73537530

GI number: 73537530

Start: 280591

End: 281571

Strand: Reverse

Name: yfeT [C]

Synonym: Reut_B3695

Alternate gene names: 73537530

Gene position: 281571-280591 (Counterclockwise)

Preceding gene: 73537531

Following gene: 73537528

Centisome position: 10.33

GC content: 65.85

Gene sequence:

>981_bases
ATGGACATACGCGAGAAGAAGACGCCACCGACGCTGGCGCCCGGCCAGACGTCCAATCCCGCCACTAGCCTGCCGCCGCG
CACGGTCGAAGGACTGCGCGATCTGGTCGTGAGCATTGGGCGCGACCAGGCCGAGGTAAAGCTGGGCGCGAAGGCCCTGA
CGGTCCTGGCTCATCTGGTAGAACGCCCCGAGGAAGTAGCCGTCCGGACAATCACGGACCTGGCCAACTCCCTCGACGTG
AACGCGTCGACACTTACGCGCCTGGCGACCCGACTGGGCTTCGAAGGGTTCGCCGAATTCCAGGGCGTATTCCGGAACAG
CATGGCCCAGCGCCACCGGCATTTTTATAGCCAGCAGGCCGAGCGGCTCGTTGGCGCGGACAATACCGGCATGCCCGGCG
GCGTTTCTCCGGAGGTTGGCGCTGTCGTCCAGCTTGCGCACGAATCCATCCAGAATGTCGAGCGATTCGTGGCCCGACTG
TCGGCCGAAGAACTGCGCGGGGCCGCGGAACTACTGGCCGAGGCACCGCGCGTGCGCGTTCATGGCCTGCGCCAGTTCAG
CGCCCTCGCGAGCTTTCTGTGCTATGGCCTGAGCATGATCCGCAGCGACGTCGGCCTGCTCGACGCCCACGGGCTGGGCG
TGGCGGAAGGCCTGGCTCAGTTGCAACGCGGCGATGTCGTCGTGGTGATGAGCGTCGCGCCCTATACGCGCAGCGTGGCC
GAAGCCGCAGCAGCGGCGGCGGAAAGCGGGCTGACAGTCATTGCCATCACCGACACCAGCGCCTCCCCGCTCGCGGCCGC
TGCGCGCCACGCCTTCTTCATCCCGCACGAAAGCAGCTTCTTCAGCAACAGCATGGGCGCCTACCTGATCTTTTGCGAAG
GCTTGCTCAATCTGGCCGCGACAAAGCTTGGCAAGCGATCGCTGCGAGCGCTGGCCCGGCGGGAGCAAATGATCGCGGCG
CTCGATATCGAGACGGAATAG

Upstream 100 bases:

>100_bases
GAGAACACCCAGGCGACCGCCGATATGCGGGTGGGTCCGACTTGCATAGAATGGGAGGTTTACGAACAGCCCGGCACTGC
CCCCCGGTACCGAATGATCA

Downstream 100 bases:

>100_bases
GCCACGCGCGTGGTCGTTCGGGGTAGCGGCGTCTTGGCTGCCTCGCTCAGTCCGTGCGGTCGAACGTCCCCGCGCCGCTT
GATACAAGGCGTTCCAGCAG

Product: RpiR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MDIREKKTPPTLAPGQTSNPATSLPPRTVEGLRDLVVSIGRDQAEVKLGAKALTVLAHLVERPEEVAVRTITDLANSLDV
NASTLTRLATRLGFEGFAEFQGVFRNSMAQRHRHFYSQQAERLVGADNTGMPGGVSPEVGAVVQLAHESIQNVERFVARL
SAEELRGAAELLAEAPRVRVHGLRQFSALASFLCYGLSMIRSDVGLLDAHGLGVAEGLAQLQRGDVVVVMSVAPYTRSVA
EAAAAAAESGLTVIAITDTSASPLAAAARHAFFIPHESSFFSNSMGAYLIFCEGLLNLAATKLGKRSLRALARREQMIAA
LDIETE

Sequences:

>Translated_326_residues
MDIREKKTPPTLAPGQTSNPATSLPPRTVEGLRDLVVSIGRDQAEVKLGAKALTVLAHLVERPEEVAVRTITDLANSLDV
NASTLTRLATRLGFEGFAEFQGVFRNSMAQRHRHFYSQQAERLVGADNTGMPGGVSPEVGAVVQLAHESIQNVERFVARL
SAEELRGAAELLAEAPRVRVHGLRQFSALASFLCYGLSMIRSDVGLLDAHGLGVAEGLAQLQRGDVVVVMSVAPYTRSVA
EAAAAAAESGLTVIAITDTSASPLAAAARHAFFIPHESSFFSNSMGAYLIFCEGLLNLAATKLGKRSLRALARREQMIAA
LDIETE
>Mature_326_residues
MDIREKKTPPTLAPGQTSNPATSLPPRTVEGLRDLVVSIGRDQAEVKLGAKALTVLAHLVERPEEVAVRTITDLANSLDV
NASTLTRLATRLGFEGFAEFQGVFRNSMAQRHRHFYSQQAERLVGADNTGMPGGVSPEVGAVVQLAHESIQNVERFVARL
SAEELRGAAELLAEAPRVRVHGLRQFSALASFLCYGLSMIRSDVGLLDAHGLGVAEGLAQLQRGDVVVVMSVAPYTRSVA
EAAAAAAESGLTVIAITDTSASPLAAAARHAFFIPHESSFFSNSMGAYLIFCEGLLNLAATKLGKRSLRALARREQMIAA
LDIETE

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 34796; Mature: 34796

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIREKKTPPTLAPGQTSNPATSLPPRTVEGLRDLVVSIGRDQAEVKLGAKALTVLAHLV
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ERPEEVAVRTITDLANSLDVNASTLTRLATRLGFEGFAEFQGVFRNSMAQRHRHFYSQQA
HCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERLVGADNTGMPGGVSPEVGAVVQLAHESIQNVERFVARLSAEELRGAAELLAEAPRVRV
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
HGLRQFSALASFLCYGLSMIRSDVGLLDAHGLGVAEGLAQLQRGDVVVVMSVAPYTRSVA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHH
EAAAAAAESGLTVIAITDTSASPLAAAARHAFFIPHESSFFSNSMGAYLIFCEGLLNLAA
HHHHHHHHCCCEEEEEECCCCCHHHHHHHHHEECCCCCHHHHCCCCHHHHHHHHHHHHHH
TKLGKRSLRALARREQMIAALDIETE
HHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDIREKKTPPTLAPGQTSNPATSLPPRTVEGLRDLVVSIGRDQAEVKLGAKALTVLAHLV
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ERPEEVAVRTITDLANSLDVNASTLTRLATRLGFEGFAEFQGVFRNSMAQRHRHFYSQQA
HCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERLVGADNTGMPGGVSPEVGAVVQLAHESIQNVERFVARLSAEELRGAAELLAEAPRVRV
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
HGLRQFSALASFLCYGLSMIRSDVGLLDAHGLGVAEGLAQLQRGDVVVVMSVAPYTRSVA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHH
EAAAAAAESGLTVIAITDTSASPLAAAARHAFFIPHESSFFSNSMGAYLIFCEGLLNLAA
HHHHHHHHCCCEEEEEECCCCCHHHHHHHHHEECCCCCHHHHCCCCHHHHHHHHHHHHHH
TKLGKRSLRALARREQMIAALDIETE
HHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]