Click here to switch to the map view.

The map label for this gene is dcyD [H]

Identifier: 73537417

GI number: 73537417

Start: 139541

End: 140557

Strand: Reverse

Name: dcyD [H]

Synonym: Reut_B3582

Alternate gene names: 73537417

Gene position: 140557-139541 (Counterclockwise)

Preceding gene: 73537418

Following gene: 73537416

Centisome position: 5.16

GC content: 62.34

Gene sequence:

>1017_bases
ATGAAAAAAATCTCGGATCGCATTGCTTCATTTTCCCGCCTTCAACTGGTCGGCGCGGTCACCCCCCTGGAGAAACTCGA
TCGCTTGTCTCGTATGCTCGGTCGCGATGTCTACATCAAGCGCGATGACACCACGCCACTCGCCTTTGGCGGAAACAAGC
TGCGCAAGCTCGAGTTTCTGGCGGCCGACGCCTTGAGCAAAGGTGCTGATACGCTGGTGACAGCCGGCGCGATTCAGTCG
AATCATGTCCGGCAAACGGCCGCCGTGGCAGCCCGTCTTGGACTGCGTTGCCACGCGTTGCTGGAGAACCCAATCAACAC
CACGGACGTCGACTATCTGCGCAGCGGTAATCGCCTGCTGCTCGACCTGTTCGACGCGCACGGTGAACCGGTTGCCACGC
TCGACAATGCCGACGCCCAGTTGCAAGCACTGGCCGAACGACTGCGCGGCGACGGGTATCAGCCCTACATCATCCCAATC
GGCGGGTCCAATCCGCTTGGCGCATTGGGATATGTCCATGCCGGCCTGGAGATGGCGCAGCAAGCCGACGCGATGGGCGT
TTCATTTGCGGCTGTCGTGCTGGCATCCGGCAGTGCGGGAACCCACGGAGGCCTGGCGTTGGCACTCGCCCATGCAATGC
CGGACGCACAAGTCGTCGGTATTACCGTGTCCCGGCCCGTCGAGGCGCAGGCGCCCAAGGTGGCAGGGCTGATCGACGGA
ACGGCGGAATTGCTCGACATCGAAGTACCGGCGGAACTGCGGCTCGAACTGTGGGACGAATATTTCCTGCCCCGCTATGG
CGAACCTAACCGGGCTGCGCTCGATGCCATCAGATTGCTGGCCCGTACGGAGGGAGTCCTCCTCGACCCCGTGTATACGG
GAAAAGCGATGGCTGGCCTGCTCGACGGCGTGATGCGCAAGCGCTTTGCGGGTGAGGGTCCGCTGCTGTTCCTGCATACC
GGCGGCGCACCGGCGCTATTTGCCTATCGCGACGCGCTCCCGGCAGTCCTCATTTAA

Upstream 100 bases:

>100_bases
ACTGATGAAGGCGCGCTTGCCCGCATGAAGCCTAGAGTCGCCGATAGCTCCCTCACGGCGTCTGTCTCACTTGATTTATT
TCCTCCAGAGCCGAAGTCCC

Downstream 100 bases:

>100_bases
TCATCTGCCTGCATATCAAACGTCCCGGCGGCACTCGACCACGAATAACGATGCCGCATCGTTTAACCATGAGAATTGCT
ATGAATGAAAACACCCACCT

Product: D-cysteine desulfhydrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MKKISDRIASFSRLQLVGAVTPLEKLDRLSRMLGRDVYIKRDDTTPLAFGGNKLRKLEFLAADALSKGADTLVTAGAIQS
NHVRQTAAVAARLGLRCHALLENPINTTDVDYLRSGNRLLLDLFDAHGEPVATLDNADAQLQALAERLRGDGYQPYIIPI
GGSNPLGALGYVHAGLEMAQQADAMGVSFAAVVLASGSAGTHGGLALALAHAMPDAQVVGITVSRPVEAQAPKVAGLIDG
TAELLDIEVPAELRLELWDEYFLPRYGEPNRAALDAIRLLARTEGVLLDPVYTGKAMAGLLDGVMRKRFAGEGPLLFLHT
GGAPALFAYRDALPAVLI

Sequences:

>Translated_338_residues
MKKISDRIASFSRLQLVGAVTPLEKLDRLSRMLGRDVYIKRDDTTPLAFGGNKLRKLEFLAADALSKGADTLVTAGAIQS
NHVRQTAAVAARLGLRCHALLENPINTTDVDYLRSGNRLLLDLFDAHGEPVATLDNADAQLQALAERLRGDGYQPYIIPI
GGSNPLGALGYVHAGLEMAQQADAMGVSFAAVVLASGSAGTHGGLALALAHAMPDAQVVGITVSRPVEAQAPKVAGLIDG
TAELLDIEVPAELRLELWDEYFLPRYGEPNRAALDAIRLLARTEGVLLDPVYTGKAMAGLLDGVMRKRFAGEGPLLFLHT
GGAPALFAYRDALPAVLI
>Mature_338_residues
MKKISDRIASFSRLQLVGAVTPLEKLDRLSRMLGRDVYIKRDDTTPLAFGGNKLRKLEFLAADALSKGADTLVTAGAIQS
NHVRQTAAVAARLGLRCHALLENPINTTDVDYLRSGNRLLLDLFDAHGEPVATLDNADAQLQALAERLRGDGYQPYIIPI
GGSNPLGALGYVHAGLEMAQQADAMGVSFAAVVLASGSAGTHGGLALALAHAMPDAQVVGITVSRPVEAQAPKVAGLIDG
TAELLDIEVPAELRLELWDEYFLPRYGEPNRAALDAIRLLARTEGVLLDPVYTGKAMAGLLDGVMRKRFAGEGPLLFLHT
GGAPALFAYRDALPAVLI

Specific function: Catalyzes the alpha,beta-elimination reaction of D- cysteine and of several D-cysteine derivatives. It could be a defense mechanism against D-cysteine [H]

COG id: COG2515

COG function: function code E; 1-aminocyclopropane-1-carboxylate deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ACC deaminase/D-cysteine desulfhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082000, Length=324, Percent_Identity=61.7283950617284, Blast_Score=406, Evalue=1e-114,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005966
- InterPro:   IPR001926 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =4.4.1.15 [H]

Molecular weight: Translated: 35888; Mature: 35888

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKISDRIASFSRLQLVGAVTPLEKLDRLSRMLGRDVYIKRDDTTPLAFGGNKLRKLEFL
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCEEECCCHHHHHHHH
AADALSKGADTLVTAGAIQSNHVRQTAAVAARLGLRCHALLENPINTTDVDYLRSGNRLL
HHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCHHHHHHHCCCCCCCCHHHHHCCCEEE
LDLFDAHGEPVATLDNADAQLQALAERLRGDGYQPYIIPIGGSNPLGALGYVHAGLEMAQ
EEEECCCCCCEEEECCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHH
QADAMGVSFAAVVLASGSAGTHGGLALALAHAMPDAQVVGITVSRPVEAQAPKVAGLIDG
HHHHCCHHEEEHEEECCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEECC
TAELLDIEVPAELRLELWDEYFLPRYGEPNRAALDAIRLLARTEGVLLDPVYTGKAMAGL
CHHEEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCHHHHHH
LDGVMRKRFAGEGPLLFLHTGGAPALFAYRDALPAVLI
HHHHHHHHHCCCCCEEEEECCCCCEEHHHHHCCCHHCC
>Mature Secondary Structure
MKKISDRIASFSRLQLVGAVTPLEKLDRLSRMLGRDVYIKRDDTTPLAFGGNKLRKLEFL
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCEEECCCHHHHHHHH
AADALSKGADTLVTAGAIQSNHVRQTAAVAARLGLRCHALLENPINTTDVDYLRSGNRLL
HHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCHHHHHHHCCCCCCCCHHHHHCCCEEE
LDLFDAHGEPVATLDNADAQLQALAERLRGDGYQPYIIPIGGSNPLGALGYVHAGLEMAQ
EEEECCCCCCEEEECCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHH
QADAMGVSFAAVVLASGSAGTHGGLALALAHAMPDAQVVGITVSRPVEAQAPKVAGLIDG
HHHHCCHHEEEHEEECCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEECC
TAELLDIEVPAELRLELWDEYFLPRYGEPNRAALDAIRLLARTEGVLLDPVYTGKAMAGL
CHHEEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCHHHHHH
LDGVMRKRFAGEGPLLFLHTGGAPALFAYRDALPAVLI
HHHHHHHHHCCCCCEEEEECCCCCEEHHHHHCCCHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA